Ggra3225.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3225.t1
Unique NameGgra3225.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length455
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000922_piloncontigtig00000922_pilon:118310..119674 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005703605.1
Preferred nameMPK17
PFAMsPkinase
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K04371,ko:K11430,ko:K13105,ko:K19603,ko:K20290,ko:K20538,ko:K22312
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04016,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04114,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05202,ko05203,ko05205,ko05206,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map00310,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04016,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04114,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05202,map05203,map05205,map05206,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00687
GOsGO:0000165,GO:0000226,GO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004707,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005773,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009611,GO:0009636,GO:0009719,GO:0009725,GO:0009737,GO:0009738,GO:0009753,GO:0009755,GO:0009987,GO:0010033,GO:0010035,GO:0010468,GO:0010638,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018107,GO:0018193,GO:0018209,GO:0018210,GO:0019222,GO:0019538,GO:0023014,GO:0023052,GO:0030865,GO:0031122,GO:0032870,GO:0033043,GO:0033993,GO:0035556,GO:0036211,GO:0042221,GO:0042493,GO:0042542,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043622,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046777,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0071215,GO:0071229,GO:0071310,GO:0071396,GO:0071495,GO:0071704,GO:0071840,GO:0071944,GO:0097305,GO:0097306,GO:0097435,GO:0140096,GO:1900063,GO:1900064,GO:1901564,GO:1901700,GO:1901701
Evalue2.05e-120
EggNOG OGsKOG0660@1|root,KOG0660@2759|Eukaryota
EC2.1.1.43,2.7.11.24,2.8.2.39
DescriptionMAP kinase activity
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko03041,ko04131,ko04147
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3225Ggra3225Gracilaria gracilis GNS1m malegenetig00000922_pilon 118310..119674 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3225.t1.stop1Ggra3225.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000922_pilon 118310..118312 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3225.t1.CDS1Ggra3225.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000922_pilon 118310..119674 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3225.t1.exon1Ggra3225.t1.exon1Gracilaria gracilis GNS1m maleexontig00000922_pilon 118310..119674 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3225.t1.start1Ggra3225.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000922_pilon 119672..119674 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3225.t1Ggra3225.t1Gracilaria gracilis GNS1m malepolypeptidetig00000922_pilon 118310..119674 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3225.t1 ID=Ggra3225.t1|Name=Ggra3225.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=455bp
MAHDGPLLANRYRLTQVIGEGAYGVVASAQDVVTDQQVAVKRIKRVLDTY
PMATRILRELKFLRLLRGHDNVIEIKDILVPSDRDRFNDTFVVFELMPCD
LSRVIMSSAPLNAANIKYLMFQLLRGIQYLHAAGVLHRDLKPSNILVDSR
CSLKICDFGLARAAFRAENDSDMVLWTDYVATRWYRAPELIMPQANNYGS
AIDVWSAGCIFAEMLLRRPLFPGNDELDQLRQITEFTGTPTPDSIRKLRS
HKAQDFLRDARQKSAANIPAIFPEGTDPQAFKLIEGMLQFDPDKRLSARE
ALMFDYFKEWRDPMGFGGRPQALSEKEFDFEKRINMTDKESLLYIRHELL
EEILFYHPEKRDELFGNGPVYDMRSPAMGFAAAMDNQRHAATVGGKTLPP
HAMQELCISQHERRIAQQGIQRGPTLPEDIMRQYNKNENEGHTSRKVEDT
AMHD*
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spliced messenger RNA

>Ggra3225.t1 ID=Ggra3225.t1|Name=Ggra3225.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1365bp|location=Sequence derived from alignment at tig00000922_pilon:118310..119674- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCCATGACGGCCCGTTGTTGGCCAATCGCTACCGCTTGACGCAGGT
CATTGGCGAGGGCGCCTATGGCGTCGTCGCCTCCGCCCAGGATGTCGTTA
CCGACCAGCAGGTCGCTGTCAAGCGCATCAAGCGCGTCTTGGATACCTAC
CCCATGGCCACCCGCATCCTGCGCGAGCTCAAGTTTCTCAGGTTGCTCAG
GGGCCATGACAACGTCATCGAGATAAAGGATATTCTTGTCCCTTCTGATC
GCGATCGATTCAATGACACCTTCGTCGTCTTCGAGCTCATGCCCTGCGAC
TTGTCCAGGGTCATCATGTCCTCTGCCCCATTGAACGCCGCCAATATCAA
GTACCTCATGTTCCAGCTGCTCAGAGGCATCCAGTACCTGCACGCCGCCG
GCGTGCTGCACCGCGACTTGAAGCCGTCCAACATCCTCGTCGACAGCCGC
TGCAGCCTCAAGATTTGTGACTTTGGCCTCGCTCGCGCCGCTTTTCGCGC
GGAGAACGACTCCGACATGGTGCTGTGGACCGACTACGTCGCCACCCGCT
GGTACAGAGCGCCCGAACTCATCATGCCGCAGGCCAATAATTACGGCTCC
GCCATCGACGTGTGGTCCGCCGGCTGCATCTTTGCCGAGATGCTGTTGAG
ACGACCCTTGTTCCCGGGCAATGATGAGCTCGATCAATTGCGTCAGATCA
CCGAGTTCACCGGCACCCCCACTCCCGACAGCATTCGCAAGCTTCGCAGT
CACAAGGCGCAGGATTTTCTACGCGACGCCCGCCAGAAGAGTGCCGCCAA
CATCCCGGCCATCTTTCCGGAAGGCACCGATCCTCAGGCGTTCAAGCTCA
TTGAGGGTATGCTGCAGTTTGACCCGGATAAACGCTTGTCCGCTAGAGAA
GCGCTTATGTTTGATTACTTCAAGGAATGGAGAGATCCGATGGGATTTGG
CGGCAGACCGCAGGCTCTCAGTGAAAAGGAGTTTGACTTTGAGAAACGTA
TTAATATGACCGATAAAGAGAGTTTGCTCTATATCCGCCATGAGTTGTTG
GAGGAGATCCTGTTTTATCATCCGGAGAAACGGGACGAGCTGTTCGGCAA
TGGTCCCGTATACGACATGAGAAGCCCAGCCATGGGATTTGCAGCGGCTA
TGGACAACCAACGTCATGCCGCTACTGTCGGCGGTAAGACACTGCCACCT
CACGCTATGCAGGAGTTGTGCATTAGCCAGCATGAAAGACGTATTGCCCA
ACAAGGGATACAAAGAGGGCCTACTCTACCTGAAGACATCATGAGACAAT
ACAACAAGAATGAGAATGAAGGCCACACTTCACGAAAAGTAGAAGATACA
GCTATGCATGATTGA
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protein sequence of Ggra3225.t1

>Ggra3225.t1 ID=Ggra3225.t1|Name=Ggra3225.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=455bp
MAHDGPLLANRYRLTQVIGEGAYGVVASAQDVVTDQQVAVKRIKRVLDTY
PMATRILRELKFLRLLRGHDNVIEIKDILVPSDRDRFNDTFVVFELMPCD
LSRVIMSSAPLNAANIKYLMFQLLRGIQYLHAAGVLHRDLKPSNILVDSR
CSLKICDFGLARAAFRAENDSDMVLWTDYVATRWYRAPELIMPQANNYGS
AIDVWSAGCIFAEMLLRRPLFPGNDELDQLRQITEFTGTPTPDSIRKLRS
HKAQDFLRDARQKSAANIPAIFPEGTDPQAFKLIEGMLQFDPDKRLSARE
ALMFDYFKEWRDPMGFGGRPQALSEKEFDFEKRINMTDKESLLYIRHELL
EEILFYHPEKRDELFGNGPVYDMRSPAMGFAAAMDNQRHAATVGGKTLPP
HAMQELCISQHERRIAQQGIQRGPTLPEDIMRQYNKNENEGHTSRKVEDT
AMHD*
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mRNA from alignment at tig00000922_pilon:118310..119674-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3225.t1 ID=Ggra3225.t1|Name=Ggra3225.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1365bp|location=Sequence derived from alignment at tig00000922_pilon:118310..119674- (Gracilaria gracilis GNS1m male)
ATGGCCCATGACGGCCCGTTGTTGGCCAATCGCTACCGCTTGACGCAGGT
CATTGGCGAGGGCGCCTATGGCGTCGTCGCCTCCGCCCAGGATGTCGTTA
CCGACCAGCAGGTCGCTGTCAAGCGCATCAAGCGCGTCTTGGATACCTAC
CCCATGGCCACCCGCATCCTGCGCGAGCTCAAGTTTCTCAGGTTGCTCAG
GGGCCATGACAACGTCATCGAGATAAAGGATATTCTTGTCCCTTCTGATC
GCGATCGATTCAATGACACCTTCGTCGTCTTCGAGCTCATGCCCTGCGAC
TTGTCCAGGGTCATCATGTCCTCTGCCCCATTGAACGCCGCCAATATCAA
GTACCTCATGTTCCAGCTGCTCAGAGGCATCCAGTACCTGCACGCCGCCG
GCGTGCTGCACCGCGACTTGAAGCCGTCCAACATCCTCGTCGACAGCCGC
TGCAGCCTCAAGATTTGTGACTTTGGCCTCGCTCGCGCCGCTTTTCGCGC
GGAGAACGACTCCGACATGGTGCTGTGGACCGACTACGTCGCCACCCGCT
GGTACAGAGCGCCCGAACTCATCATGCCGCAGGCCAATAATTACGGCTCC
GCCATCGACGTGTGGTCCGCCGGCTGCATCTTTGCCGAGATGCTGTTGAG
ACGACCCTTGTTCCCGGGCAATGATGAGCTCGATCAATTGCGTCAGATCA
CCGAGTTCACCGGCACCCCCACTCCCGACAGCATTCGCAAGCTTCGCAGT
CACAAGGCGCAGGATTTTCTACGCGACGCCCGCCAGAAGAGTGCCGCCAA
CATCCCGGCCATCTTTCCGGAAGGCACCGATCCTCAGGCGTTCAAGCTCA
TTGAGGGTATGCTGCAGTTTGACCCGGATAAACGCTTGTCCGCTAGAGAA
GCGCTTATGTTTGATTACTTCAAGGAATGGAGAGATCCGATGGGATTTGG
CGGCAGACCGCAGGCTCTCAGTGAAAAGGAGTTTGACTTTGAGAAACGTA
TTAATATGACCGATAAAGAGAGTTTGCTCTATATCCGCCATGAGTTGTTG
GAGGAGATCCTGTTTTATCATCCGGAGAAACGGGACGAGCTGTTCGGCAA
TGGTCCCGTATACGACATGAGAAGCCCAGCCATGGGATTTGCAGCGGCTA
TGGACAACCAACGTCATGCCGCTACTGTCGGCGGTAAGACACTGCCACCT
CACGCTATGCAGGAGTTGTGCATTAGCCAGCATGAAAGACGTATTGCCCA
ACAAGGGATACAAAGAGGGCCTACTCTACCTGAAGACATCATGAGACAAT
ACAACAAGAATGAGAATGAAGGCCACACTTCACGAAAAGTAGAAGATACA
GCTATGCATGATTGA
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Coding sequence (CDS) from alignment at tig00000922_pilon:118310..119674-

>Ggra3225.t1 ID=Ggra3225.t1|Name=Ggra3225.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1365bp|location=Sequence derived from alignment at tig00000922_pilon:118310..119674- (Gracilaria gracilis GNS1m male)
ATGGCCCATGACGGCCCGTTGTTGGCCAATCGCTACCGCTTGACGCAGGT
CATTGGCGAGGGCGCCTATGGCGTCGTCGCCTCCGCCCAGGATGTCGTTA
CCGACCAGCAGGTCGCTGTCAAGCGCATCAAGCGCGTCTTGGATACCTAC
CCCATGGCCACCCGCATCCTGCGCGAGCTCAAGTTTCTCAGGTTGCTCAG
GGGCCATGACAACGTCATCGAGATAAAGGATATTCTTGTCCCTTCTGATC
GCGATCGATTCAATGACACCTTCGTCGTCTTCGAGCTCATGCCCTGCGAC
TTGTCCAGGGTCATCATGTCCTCTGCCCCATTGAACGCCGCCAATATCAA
GTACCTCATGTTCCAGCTGCTCAGAGGCATCCAGTACCTGCACGCCGCCG
GCGTGCTGCACCGCGACTTGAAGCCGTCCAACATCCTCGTCGACAGCCGC
TGCAGCCTCAAGATTTGTGACTTTGGCCTCGCTCGCGCCGCTTTTCGCGC
GGAGAACGACTCCGACATGGTGCTGTGGACCGACTACGTCGCCACCCGCT
GGTACAGAGCGCCCGAACTCATCATGCCGCAGGCCAATAATTACGGCTCC
GCCATCGACGTGTGGTCCGCCGGCTGCATCTTTGCCGAGATGCTGTTGAG
ACGACCCTTGTTCCCGGGCAATGATGAGCTCGATCAATTGCGTCAGATCA
CCGAGTTCACCGGCACCCCCACTCCCGACAGCATTCGCAAGCTTCGCAGT
CACAAGGCGCAGGATTTTCTACGCGACGCCCGCCAGAAGAGTGCCGCCAA
CATCCCGGCCATCTTTCCGGAAGGCACCGATCCTCAGGCGTTCAAGCTCA
TTGAGGGTATGCTGCAGTTTGACCCGGATAAACGCTTGTCCGCTAGAGAA
GCGCTTATGTTTGATTACTTCAAGGAATGGAGAGATCCGATGGGATTTGG
CGGCAGACCGCAGGCTCTCAGTGAAAAGGAGTTTGACTTTGAGAAACGTA
TTAATATGACCGATAAAGAGAGTTTGCTCTATATCCGCCATGAGTTGTTG
GAGGAGATCCTGTTTTATCATCCGGAGAAACGGGACGAGCTGTTCGGCAA
TGGTCCCGTATACGACATGAGAAGCCCAGCCATGGGATTTGCAGCGGCTA
TGGACAACCAACGTCATGCCGCTACTGTCGGCGGTAAGACACTGCCACCT
CACGCTATGCAGGAGTTGTGCATTAGCCAGCATGAAAGACGTATTGCCCA
ACAAGGGATACAAAGAGGGCCTACTCTACCTGAAGACATCATGAGACAAT
ACAACAAGAATGAGAATGAAGGCCACACTTCACGAAAAGTAGAAGATACA
GCTATGCATGATTGA
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