Ggra3150.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3150.t1
Unique NameGgra3150.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length323
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000120_piloncontigtig00000120_pilon:310279..311247 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3150Ggra3150Gracilaria gracilis GNS1m malegenetig00000120_pilon 310279..311247 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3150.t1.stop1Ggra3150.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000120_pilon 310279..310281 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3150.t1.CDS1Ggra3150.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000120_pilon 310279..311247 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3150.t1.exon1Ggra3150.t1.exon1Gracilaria gracilis GNS1m maleexontig00000120_pilon 310279..311247 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3150.t1.start1Ggra3150.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000120_pilon 311245..311247 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3150.t1Ggra3150.t1Gracilaria gracilis GNS1m malepolypeptidetig00000120_pilon 310279..311247 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3150.t1 ID=Ggra3150.t1|Name=Ggra3150.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=323bp
MHSVAEWLDISILILAACLHLRINSYLAESRILRKLQNPVRKRIGEDLKE
ETVERRFAELVLGLCKGDNRRSGRMVNRGFDWFYVSASLLQLVVPNLKVS
DSYLALAVPVLVRSFLVIGAGVLKKTAVLLNVLASLSYGCLLYLSSTDLF
VFPATMRTIAYYILWVAFSLFVLDLAVEFYSEWRGSDDHLFCVAQAIMKN
RVNEAQRSRLLKMTELMHREEFGQEAIRERTTRRRLMDFIVFPMSLWATV
ILYNNSWMYHNVAREVALEVLELLFVFMSFANDTHVEPRVFVKLLKHAHD
LTGKENFQESKSEPGGEASISP*
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spliced messenger RNA

>Ggra3150.t1 ID=Ggra3150.t1|Name=Ggra3150.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=969bp|location=Sequence derived from alignment at tig00000120_pilon:310279..311247- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCACTCCGTCGCGGAGTGGCTTGACATAAGTATCCTAATACTCGCAGC
ATGCTTGCACCTGAGAATTAACTCATATTTGGCCGAGTCTCGAATTTTAC
GCAAACTGCAAAACCCGGTGAGGAAACGAATAGGAGAAGATTTGAAGGAG
GAGACTGTGGAAAGGCGGTTTGCTGAATTGGTTTTGGGGCTATGTAAGGG
AGACAACCGCCGATCGGGCCGAATGGTGAACAGAGGTTTTGACTGGTTCT
ACGTTTCCGCAAGCTTGTTGCAACTTGTTGTCCCGAACCTGAAAGTATCG
GATTCCTATTTGGCTCTCGCAGTGCCTGTGCTAGTTCGATCATTTCTCGT
AATTGGAGCTGGAGTGCTTAAAAAGACTGCTGTACTCCTGAATGTTTTGG
CATCTCTTTCTTACGGATGTCTATTATATTTGTCATCAACTGACCTTTTC
GTTTTTCCCGCGACTATGCGTACTATTGCCTATTATATACTCTGGGTTGC
ATTCTCCCTGTTTGTTCTGGATTTGGCAGTGGAGTTTTATTCGGAATGGC
GCGGTTCGGACGATCACTTGTTCTGCGTGGCCCAAGCGATTATGAAGAAC
CGTGTAAACGAAGCACAGAGGTCTAGACTCCTAAAGATGACGGAGCTTAT
GCATCGTGAAGAGTTCGGTCAAGAAGCGATTCGCGAGAGAACTACTCGAA
GAAGGCTTATGGATTTTATCGTGTTTCCGATGAGTTTATGGGCAACAGTG
ATATTATATAACAACTCTTGGATGTACCACAATGTGGCTAGGGAGGTGGC
CCTAGAGGTGCTGGAATTGCTATTTGTTTTTATGTCATTTGCTAATGACA
CACACGTAGAGCCAAGGGTTTTCGTGAAGTTGCTGAAACATGCTCATGAT
CTTACTGGCAAAGAAAACTTTCAAGAATCAAAATCTGAGCCGGGTGGGGA
AGCCAGCATAAGCCCCTAA
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protein sequence of Ggra3150.t1

>Ggra3150.t1 ID=Ggra3150.t1|Name=Ggra3150.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=323bp
MHSVAEWLDISILILAACLHLRINSYLAESRILRKLQNPVRKRIGEDLKE
ETVERRFAELVLGLCKGDNRRSGRMVNRGFDWFYVSASLLQLVVPNLKVS
DSYLALAVPVLVRSFLVIGAGVLKKTAVLLNVLASLSYGCLLYLSSTDLF
VFPATMRTIAYYILWVAFSLFVLDLAVEFYSEWRGSDDHLFCVAQAIMKN
RVNEAQRSRLLKMTELMHREEFGQEAIRERTTRRRLMDFIVFPMSLWATV
ILYNNSWMYHNVAREVALEVLELLFVFMSFANDTHVEPRVFVKLLKHAHD
LTGKENFQESKSEPGGEASISP*
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mRNA from alignment at tig00000120_pilon:310279..311247-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3150.t1 ID=Ggra3150.t1|Name=Ggra3150.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=969bp|location=Sequence derived from alignment at tig00000120_pilon:310279..311247- (Gracilaria gracilis GNS1m male)
ATGCACTCCGTCGCGGAGTGGCTTGACATAAGTATCCTAATACTCGCAGC
ATGCTTGCACCTGAGAATTAACTCATATTTGGCCGAGTCTCGAATTTTAC
GCAAACTGCAAAACCCGGTGAGGAAACGAATAGGAGAAGATTTGAAGGAG
GAGACTGTGGAAAGGCGGTTTGCTGAATTGGTTTTGGGGCTATGTAAGGG
AGACAACCGCCGATCGGGCCGAATGGTGAACAGAGGTTTTGACTGGTTCT
ACGTTTCCGCAAGCTTGTTGCAACTTGTTGTCCCGAACCTGAAAGTATCG
GATTCCTATTTGGCTCTCGCAGTGCCTGTGCTAGTTCGATCATTTCTCGT
AATTGGAGCTGGAGTGCTTAAAAAGACTGCTGTACTCCTGAATGTTTTGG
CATCTCTTTCTTACGGATGTCTATTATATTTGTCATCAACTGACCTTTTC
GTTTTTCCCGCGACTATGCGTACTATTGCCTATTATATACTCTGGGTTGC
ATTCTCCCTGTTTGTTCTGGATTTGGCAGTGGAGTTTTATTCGGAATGGC
GCGGTTCGGACGATCACTTGTTCTGCGTGGCCCAAGCGATTATGAAGAAC
CGTGTAAACGAAGCACAGAGGTCTAGACTCCTAAAGATGACGGAGCTTAT
GCATCGTGAAGAGTTCGGTCAAGAAGCGATTCGCGAGAGAACTACTCGAA
GAAGGCTTATGGATTTTATCGTGTTTCCGATGAGTTTATGGGCAACAGTG
ATATTATATAACAACTCTTGGATGTACCACAATGTGGCTAGGGAGGTGGC
CCTAGAGGTGCTGGAATTGCTATTTGTTTTTATGTCATTTGCTAATGACA
CACACGTAGAGCCAAGGGTTTTCGTGAAGTTGCTGAAACATGCTCATGAT
CTTACTGGCAAAGAAAACTTTCAAGAATCAAAATCTGAGCCGGGTGGGGA
AGCCAGCATAAGCCCCTAA
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Coding sequence (CDS) from alignment at tig00000120_pilon:310279..311247-

>Ggra3150.t1 ID=Ggra3150.t1|Name=Ggra3150.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=969bp|location=Sequence derived from alignment at tig00000120_pilon:310279..311247- (Gracilaria gracilis GNS1m male)
ATGCACTCCGTCGCGGAGTGGCTTGACATAAGTATCCTAATACTCGCAGC
ATGCTTGCACCTGAGAATTAACTCATATTTGGCCGAGTCTCGAATTTTAC
GCAAACTGCAAAACCCGGTGAGGAAACGAATAGGAGAAGATTTGAAGGAG
GAGACTGTGGAAAGGCGGTTTGCTGAATTGGTTTTGGGGCTATGTAAGGG
AGACAACCGCCGATCGGGCCGAATGGTGAACAGAGGTTTTGACTGGTTCT
ACGTTTCCGCAAGCTTGTTGCAACTTGTTGTCCCGAACCTGAAAGTATCG
GATTCCTATTTGGCTCTCGCAGTGCCTGTGCTAGTTCGATCATTTCTCGT
AATTGGAGCTGGAGTGCTTAAAAAGACTGCTGTACTCCTGAATGTTTTGG
CATCTCTTTCTTACGGATGTCTATTATATTTGTCATCAACTGACCTTTTC
GTTTTTCCCGCGACTATGCGTACTATTGCCTATTATATACTCTGGGTTGC
ATTCTCCCTGTTTGTTCTGGATTTGGCAGTGGAGTTTTATTCGGAATGGC
GCGGTTCGGACGATCACTTGTTCTGCGTGGCCCAAGCGATTATGAAGAAC
CGTGTAAACGAAGCACAGAGGTCTAGACTCCTAAAGATGACGGAGCTTAT
GCATCGTGAAGAGTTCGGTCAAGAAGCGATTCGCGAGAGAACTACTCGAA
GAAGGCTTATGGATTTTATCGTGTTTCCGATGAGTTTATGGGCAACAGTG
ATATTATATAACAACTCTTGGATGTACCACAATGTGGCTAGGGAGGTGGC
CCTAGAGGTGCTGGAATTGCTATTTGTTTTTATGTCATTTGCTAATGACA
CACACGTAGAGCCAAGGGTTTTCGTGAAGTTGCTGAAACATGCTCATGAT
CTTACTGGCAAAGAAAACTTTCAAGAATCAAAATCTGAGCCGGGTGGGGA
AGCCAGCATAAGCCCCTAA
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