Ggra3140.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3140.t1
Unique NameGgra3140.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1350
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000120_piloncontigtig00000120_pilon:285178..289227 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog45157.CMA093CT
PFAMsDEAD,HRDC,Helicase_C,RQC,RecQ_Zn_bind
Max annot lvl2759|Eukaryota
KEGG koko:K03654,ko:K10901
KEGG Pathwayko03018,ko03440,ko03460,map03018,map03440,map03460
KEGG ModuleM00295,M00414
GOsGO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008270,GO:0009295,GO:0009378,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017116,GO:0017117,GO:0030894,GO:0032392,GO:0032508,GO:0032991,GO:0032993,GO:0033202,GO:0033554,GO:0034641,GO:0042623,GO:0043138,GO:0043140,GO:0043142,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494,GO:1904949
Evalue3.4e-134
EggNOG OGsCOG0514@1|root,KOG0351@2759|Eukaryota
EC3.6.4.12
Descriptionfour-way junction helicase activity
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3140Ggra3140Gracilaria gracilis GNS1m malegenetig00000120_pilon 285178..289227 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3140.t1.stop1Ggra3140.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000120_pilon 285178..285180 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3140.t1.CDS1Ggra3140.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000120_pilon 285178..289227 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3140.t1.exon1Ggra3140.t1.exon1Gracilaria gracilis GNS1m maleexontig00000120_pilon 285178..289227 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3140.t1.start1Ggra3140.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000120_pilon 289225..289227 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3140.t1Ggra3140.t1Gracilaria gracilis GNS1m malepolypeptidetig00000120_pilon 285178..289227 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3140.t1 ID=Ggra3140.t1|Name=Ggra3140.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1350bp
MHEDASALRAPQCRTSLPIVRDFFSSPNASASGPSPPMLSRAGETESARN
VSTRPPTAPPPPRVLKRARRAPPSSRPSTRVRQHNAVAQNASGPHQNFAS
ERNQVQSYSNLPSSGRRQSHTGITMLHNGNVSNVRDSSFTRTTANDTRGG
VQQEPGERQSRMPPVGLISGAASPANRKTSNNPSRDIRGNGPVLNDFLSP
KSEFEDDIEEFTRPDTQFQQIRQRQHQSLGARNPEDMAISAVGSSVTKGS
MSNSKRSRTLVSPGAAQSTRIRTAGTASVPVENTDADDELLANLDLESVI
AESRRQWRPPTPSSMRNTAQVPQQSLSNRNTTPVAHRPTPLSNGSPDNEE
VRKLKRRIKALHESLYHISSLLVMEDDETSIIRYEETKQEQSKLLDELNE
RLRNLRAGIPANTPGSFGAKGQRALASQHYSPVTPSNPTFSRLPPQQNIN
PVPFDNSSCFSSNPVSAPQQSLQQCAPPPPSNINITNNYYPPTIGPSDGG
AHSSQPQRDFNGDVDQYHSVGCGNDFQNNRPSNIPVDLQALRSRPEDHND
HDEGLFHEEDPQMEHVMAFTPTKAPKEGTLRDLQGSQLPVFGPNDRAAFE
WRDEGGSKFPWSLQLAIENRSVFGNPGFRPNQREAMNAALSGKDVFVLMP
TGGGKSLCYQLPAIMRPGVTVVVSPLVSLIQDQVDHLWSKQIPCGALTST
TPQRTRSELMKDLRNSSPMSKLIYVTPEKITRSQAFFDIMSALVSKNLLQ
RFVIDEAHCVSQWGHDFRPDYKQLAVFKERFPQVPLMALTATATPEVRED
VKVQLRISRDCVMFKQSFNRRNLVYEVRKKKKAVVDEIAQEIKTIHQGEA
GIIYCFSQRDCVNVADTLLKKYGLSALPYHAGLPDGVRRGNQEAWSDGRA
QIICSTLAFGMGIDKANVRFVYHHTLPKTIEGYYQESGRAGRDGQVSRCI
LYFSMADRMKVLNMILQDAPGGNPYRGQGRSRGRKRRMTIPIRTTGTEMN
EGQVLRHTQGLAKMTAYCLNDIACRRTQLLAHFDERFDPINCNPKCDNCK
NTKGLLYNVDVSDHALSITDIIRLCQKGVTRISGQSAAYIVEFYMGRKSR
IKNTDHLHHELFGGGKGSLKDNEIYRIIEELCTLQIVSVCCEINAYGGVQ
SQLILSRRTEPLRKLKTGETRISLQSRGKPSSKDIIARKSNQYKIRDYSR
SAMEAPAFNDEINDNMMNTDEDFIDIDIDIHRQVPPTEADGPRTEVVSPY
FGQLSAAVAANVDDTEKRSDSEKTPEIHTRKRLKAFPSDTIIILDDTNET
NNRKDMRPGKPAASVSRAKSVRPPPAPMSRVKSVRPPPARTKRKRNSLV*
back to top

spliced messenger RNA

>Ggra3140.t1 ID=Ggra3140.t1|Name=Ggra3140.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=4050bp|location=Sequence derived from alignment at tig00000120_pilon:285178..289227- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCATGAAGATGCCTCGGCGCTCAGAGCGCCGCAATGTCGCACCTCCCT
CCCTATAGTGCGCGATTTCTTTAGCTCACCAAATGCATCTGCGTCCGGGC
CATCTCCTCCAATGTTATCGAGAGCTGGTGAGACTGAGAGTGCGAGGAAT
GTGAGTACACGTCCGCCAACAGCACCTCCTCCTCCCAGAGTTCTCAAACG
AGCACGACGCGCACCTCCGAGTTCAAGGCCGTCTACGAGAGTACGGCAGC
ACAATGCTGTTGCTCAGAATGCCTCTGGTCCTCATCAAAACTTCGCTTCT
GAAAGGAATCAAGTTCAATCTTATAGCAACCTTCCGTCTTCTGGGCGACG
CCAGTCCCACACAGGGATTACTATGTTGCACAATGGAAATGTGTCGAATG
TTAGAGATTCATCGTTTACTCGGACCACGGCCAATGATACGAGAGGTGGC
GTTCAGCAAGAACCTGGTGAAAGGCAATCAAGAATGCCACCGGTTGGGCT
GATTTCTGGTGCTGCATCGCCAGCGAATCGAAAGACGTCCAATAATCCCT
CAAGAGACATAAGAGGAAACGGACCCGTTTTGAATGACTTTCTGTCTCCC
AAATCAGAATTTGAAGACGATATCGAGGAATTCACTCGTCCGGACACTCA
GTTCCAGCAAATACGACAAAGACAACACCAGAGCCTTGGTGCGAGAAATC
CAGAAGACATGGCGATCTCAGCGGTGGGAAGCTCAGTAACCAAGGGTTCC
ATGAGCAATTCAAAACGTTCTCGAACCCTCGTGTCGCCTGGGGCTGCGCA
ATCCACGAGAATACGAACCGCGGGAACAGCTTCAGTGCCAGTAGAAAACA
CAGATGCTGATGACGAGTTGCTCGCGAACTTAGACCTTGAATCTGTTATC
GCCGAGAGTCGACGGCAATGGAGACCTCCCACCCCATCCTCTATGCGAAA
CACTGCTCAGGTCCCACAGCAGAGTTTGAGTAACCGAAATACAACTCCGG
TCGCACACCGTCCCACCCCATTGTCAAATGGATCTCCAGACAATGAGGAA
GTCAGGAAGCTTAAGCGTCGTATAAAGGCCCTTCACGAAAGCTTGTACCA
TATATCTTCTTTGCTAGTCATGGAGGACGACGAGACTTCCATCATCCGGT
ACGAAGAAACAAAGCAAGAGCAATCGAAACTTCTTGATGAACTCAACGAA
CGTCTGCGAAACCTACGAGCTGGAATTCCCGCGAACACTCCAGGGTCCTT
TGGAGCAAAGGGACAGAGAGCCCTTGCTTCTCAGCACTACTCCCCGGTGA
CGCCCAGCAATCCAACATTTTCTCGTCTTCCGCCTCAACAGAACATCAAT
CCCGTTCCGTTCGACAATTCGAGCTGTTTTTCTTCCAATCCAGTTTCAGC
ACCGCAACAATCCCTTCAACAATGCGCACCGCCACCACCGAGCAATATCA
ATATAACAAACAACTATTACCCTCCAACCATAGGACCATCTGACGGCGGA
GCTCATAGTTCTCAACCACAACGTGACTTCAATGGTGACGTAGACCAATA
TCACTCTGTTGGTTGCGGGAACGATTTCCAAAACAATCGTCCTTCGAATA
TTCCCGTAGACCTACAAGCTTTACGTTCTCGCCCAGAAGACCATAACGAC
CATGACGAGGGACTTTTCCACGAAGAAGACCCACAAATGGAGCACGTTAT
GGCTTTTACCCCGACAAAGGCGCCCAAAGAGGGAACCTTGAGGGATCTAC
AAGGCTCTCAGTTGCCGGTGTTTGGTCCAAATGATAGAGCGGCCTTCGAG
TGGCGCGATGAAGGTGGGAGTAAGTTTCCCTGGTCTCTCCAGTTGGCTAT
TGAGAATCGGTCTGTCTTTGGAAACCCAGGCTTTCGGCCTAACCAGAGGG
AAGCTATGAATGCAGCACTCTCTGGTAAGGATGTCTTTGTTCTCATGCCG
ACAGGAGGTGGAAAGTCACTTTGCTACCAGCTTCCTGCTATAATGCGTCC
TGGCGTTACTGTAGTTGTATCTCCTCTTGTATCTCTAATCCAGGATCAAG
TAGATCATCTTTGGTCGAAGCAGATTCCATGCGGAGCTCTAACGTCGACT
ACTCCGCAGCGCACCCGATCTGAACTGATGAAAGATTTGCGGAATTCGAG
CCCCATGAGTAAGCTAATTTATGTCACACCTGAGAAGATAACCAGGAGCC
AAGCATTCTTCGATATAATGTCGGCGCTCGTGTCCAAGAATTTGCTACAG
CGATTTGTCATTGACGAAGCACATTGCGTCTCTCAATGGGGACACGATTT
TCGCCCTGACTATAAACAGCTGGCTGTTTTCAAGGAGCGCTTTCCTCAAG
TGCCCCTGATGGCCTTGACTGCCACGGCTACCCCAGAAGTTCGCGAGGAC
GTGAAGGTTCAACTCCGGATAAGCAGAGACTGTGTAATGTTTAAGCAGAG
CTTCAACCGACGGAATTTGGTCTATGAAGTACGGAAGAAAAAGAAAGCGG
TTGTTGATGAAATAGCACAGGAAATCAAAACGATCCATCAAGGAGAAGCT
GGTATTATATATTGCTTCAGCCAGAGAGATTGTGTAAATGTGGCAGACAC
TCTGTTGAAGAAGTATGGCCTCAGTGCCTTGCCTTATCACGCTGGTTTGC
CAGACGGCGTTCGTCGAGGAAACCAAGAAGCCTGGTCAGATGGGAGAGCT
CAAATTATTTGCAGCACTCTTGCTTTTGGTATGGGTATAGACAAGGCAAA
CGTTCGTTTCGTTTATCATCACACACTACCCAAGACTATTGAAGGATACT
ACCAAGAAAGTGGCAGGGCTGGGAGAGATGGGCAGGTGAGCAGATGTATT
CTGTATTTCAGTATGGCGGACAGGATGAAAGTTCTCAACATGATTTTGCA
GGATGCTCCCGGAGGAAATCCATATAGAGGGCAAGGCCGCAGTCGTGGGA
GGAAGAGAAGAATGACAATACCAATTCGAACAACAGGAACAGAAATGAAC
GAAGGGCAAGTTTTGAGGCATACCCAGGGTTTGGCAAAAATGACGGCATA
CTGCCTAAACGATATTGCATGTCGAAGGACGCAGCTGCTGGCTCACTTTG
ACGAGCGTTTTGATCCGATCAATTGCAATCCAAAGTGCGACAATTGCAAG
AACACGAAGGGTTTGCTATACAACGTTGATGTTTCTGACCATGCATTATC
AATCACAGACATCATAAGACTGTGTCAAAAAGGTGTCACGCGTATCTCAG
GCCAGTCAGCTGCATATATTGTGGAATTCTATATGGGAAGGAAGTCCCGA
ATCAAGAACACTGACCACCTTCATCACGAACTGTTTGGGGGCGGAAAGGG
CTCCTTGAAGGACAACGAAATCTATCGCATTATTGAAGAGCTGTGTACTT
TACAAATTGTTTCTGTCTGCTGTGAGATTAACGCGTACGGGGGCGTTCAA
TCGCAGTTGATTCTAAGTCGAAGAACAGAACCTCTGAGAAAACTCAAGAC
TGGAGAGACGCGAATTTCTCTCCAGTCTCGTGGTAAGCCGAGCAGTAAGG
ACATCATCGCGAGGAAATCAAATCAATACAAGATCCGTGATTATTCTAGA
TCAGCTATGGAAGCTCCAGCTTTCAATGATGAGATCAATGACAACATGAT
GAACACAGACGAAGATTTTATCGACATCGACATTGACATCCACAGGCAAG
TCCCCCCTACTGAAGCAGATGGGCCGAGAACAGAAGTTGTATCGCCTTAC
TTTGGGCAGCTTTCCGCTGCAGTTGCTGCCAATGTGGACGACACTGAAAA
ACGCAGCGACTCAGAGAAGACCCCTGAGATTCATACCAGAAAACGGTTGA
AAGCATTCCCGAGCGACACTATAATAATTCTGGATGACACTAACGAAACT
AACAATCGAAAGGACATGAGGCCCGGTAAACCGGCCGCATCCGTTTCGCG
AGCAAAGTCGGTGAGACCACCGCCCGCACCAATGTCGCGTGTGAAGTCGG
TGAGACCGCCACCAGCGCGCACCAAACGCAAGAGAAATTCTCTTGTCTGA
back to top

protein sequence of Ggra3140.t1

>Ggra3140.t1 ID=Ggra3140.t1|Name=Ggra3140.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1350bp
MHEDASALRAPQCRTSLPIVRDFFSSPNASASGPSPPMLSRAGETESARN
VSTRPPTAPPPPRVLKRARRAPPSSRPSTRVRQHNAVAQNASGPHQNFAS
ERNQVQSYSNLPSSGRRQSHTGITMLHNGNVSNVRDSSFTRTTANDTRGG
VQQEPGERQSRMPPVGLISGAASPANRKTSNNPSRDIRGNGPVLNDFLSP
KSEFEDDIEEFTRPDTQFQQIRQRQHQSLGARNPEDMAISAVGSSVTKGS
MSNSKRSRTLVSPGAAQSTRIRTAGTASVPVENTDADDELLANLDLESVI
AESRRQWRPPTPSSMRNTAQVPQQSLSNRNTTPVAHRPTPLSNGSPDNEE
VRKLKRRIKALHESLYHISSLLVMEDDETSIIRYEETKQEQSKLLDELNE
RLRNLRAGIPANTPGSFGAKGQRALASQHYSPVTPSNPTFSRLPPQQNIN
PVPFDNSSCFSSNPVSAPQQSLQQCAPPPPSNINITNNYYPPTIGPSDGG
AHSSQPQRDFNGDVDQYHSVGCGNDFQNNRPSNIPVDLQALRSRPEDHND
HDEGLFHEEDPQMEHVMAFTPTKAPKEGTLRDLQGSQLPVFGPNDRAAFE
WRDEGGSKFPWSLQLAIENRSVFGNPGFRPNQREAMNAALSGKDVFVLMP
TGGGKSLCYQLPAIMRPGVTVVVSPLVSLIQDQVDHLWSKQIPCGALTST
TPQRTRSELMKDLRNSSPMSKLIYVTPEKITRSQAFFDIMSALVSKNLLQ
RFVIDEAHCVSQWGHDFRPDYKQLAVFKERFPQVPLMALTATATPEVRED
VKVQLRISRDCVMFKQSFNRRNLVYEVRKKKKAVVDEIAQEIKTIHQGEA
GIIYCFSQRDCVNVADTLLKKYGLSALPYHAGLPDGVRRGNQEAWSDGRA
QIICSTLAFGMGIDKANVRFVYHHTLPKTIEGYYQESGRAGRDGQVSRCI
LYFSMADRMKVLNMILQDAPGGNPYRGQGRSRGRKRRMTIPIRTTGTEMN
EGQVLRHTQGLAKMTAYCLNDIACRRTQLLAHFDERFDPINCNPKCDNCK
NTKGLLYNVDVSDHALSITDIIRLCQKGVTRISGQSAAYIVEFYMGRKSR
IKNTDHLHHELFGGGKGSLKDNEIYRIIEELCTLQIVSVCCEINAYGGVQ
SQLILSRRTEPLRKLKTGETRISLQSRGKPSSKDIIARKSNQYKIRDYSR
SAMEAPAFNDEINDNMMNTDEDFIDIDIDIHRQVPPTEADGPRTEVVSPY
FGQLSAAVAANVDDTEKRSDSEKTPEIHTRKRLKAFPSDTIIILDDTNET
NNRKDMRPGKPAASVSRAKSVRPPPAPMSRVKSVRPPPARTKRKRNSLV*
back to top

mRNA from alignment at tig00000120_pilon:285178..289227-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3140.t1 ID=Ggra3140.t1|Name=Ggra3140.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=4050bp|location=Sequence derived from alignment at tig00000120_pilon:285178..289227- (Gracilaria gracilis GNS1m male)
ATGCATGAAGATGCCTCGGCGCTCAGAGCGCCGCAATGTCGCACCTCCCT CCCTATAGTGCGCGATTTCTTTAGCTCACCAAATGCATCTGCGTCCGGGC CATCTCCTCCAATGTTATCGAGAGCTGGTGAGACTGAGAGTGCGAGGAAT GTGAGTACACGTCCGCCAACAGCACCTCCTCCTCCCAGAGTTCTCAAACG AGCACGACGCGCACCTCCGAGTTCAAGGCCGTCTACGAGAGTACGGCAGC ACAATGCTGTTGCTCAGAATGCCTCTGGTCCTCATCAAAACTTCGCTTCT GAAAGGAATCAAGTTCAATCTTATAGCAACCTTCCGTCTTCTGGGCGACG CCAGTCCCACACAGGGATTACTATGTTGCACAATGGAAATGTGTCGAATG TTAGAGATTCATCGTTTACTCGGACCACGGCCAATGATACGAGAGGTGGC GTTCAGCAAGAACCTGGTGAAAGGCAATCAAGAATGCCACCGGTTGGGCT GATTTCTGGTGCTGCATCGCCAGCGAATCGAAAGACGTCCAATAATCCCT CAAGAGACATAAGAGGAAACGGACCCGTTTTGAATGACTTTCTGTCTCCC AAATCAGAATTTGAAGACGATATCGAGGAATTCACTCGTCCGGACACTCA GTTCCAGCAAATACGACAAAGACAACACCAGAGCCTTGGTGCGAGAAATC CAGAAGACATGGCGATCTCAGCGGTGGGAAGCTCAGTAACCAAGGGTTCC ATGAGCAATTCAAAACGTTCTCGAACCCTCGTGTCGCCTGGGGCTGCGCA ATCCACGAGAATACGAACCGCGGGAACAGCTTCAGTGCCAGTAGAAAACA CAGATGCTGATGACGAGTTGCTCGCGAACTTAGACCTTGAATCTGTTATC GCCGAGAGTCGACGGCAATGGAGACCTCCCACCCCATCCTCTATGCGAAA CACTGCTCAGGTCCCACAGCAGAGTTTGAGTAACCGAAATACAACTCCGG TCGCACACCGTCCCACCCCATTGTCAAATGGATCTCCAGACAATGAGGAA GTCAGGAAGCTTAAGCGTCGTATAAAGGCCCTTCACGAAAGCTTGTACCA TATATCTTCTTTGCTAGTCATGGAGGACGACGAGACTTCCATCATCCGGT ACGAAGAAACAAAGCAAGAGCAATCGAAACTTCTTGATGAACTCAACGAA CGTCTGCGAAACCTACGAGCTGGAATTCCCGCGAACACTCCAGGGTCCTT TGGAGCAAAGGGACAGAGAGCCCTTGCTTCTCAGCACTACTCCCCGGTGA CGCCCAGCAATCCAACATTTTCTCGTCTTCCGCCTCAACAGAACATCAAT CCCGTTCCGTTCGACAATTCGAGCTGTTTTTCTTCCAATCCAGTTTCAGC ACCGCAACAATCCCTTCAACAATGCGCACCGCCACCACCGAGCAATATCA ATATAACAAACAACTATTACCCTCCAACCATAGGACCATCTGACGGCGGA GCTCATAGTTCTCAACCACAACGTGACTTCAATGGTGACGTAGACCAATA TCACTCTGTTGGTTGCGGGAACGATTTCCAAAACAATCGTCCTTCGAATA TTCCCGTAGACCTACAAGCTTTACGTTCTCGCCCAGAAGACCATAACGAC CATGACGAGGGACTTTTCCACGAAGAAGACCCACAAATGGAGCACGTTAT GGCTTTTACCCCGACAAAGGCGCCCAAAGAGGGAACCTTGAGGGATCTAC AAGGCTCTCAGTTGCCGGTGTTTGGTCCAAATGATAGAGCGGCCTTCGAG TGGCGCGATGAAGGTGGGAGTAAGTTTCCCTGGTCTCTCCAGTTGGCTAT TGAGAATCGGTCTGTCTTTGGAAACCCAGGCTTTCGGCCTAACCAGAGGG AAGCTATGAATGCAGCACTCTCTGGTAAGGATGTCTTTGTTCTCATGCCG ACAGGAGGTGGAAAGTCACTTTGCTACCAGCTTCCTGCTATAATGCGTCC TGGCGTTACTGTAGTTGTATCTCCTCTTGTATCTCTAATCCAGGATCAAG TAGATCATCTTTGGTCGAAGCAGATTCCATGCGGAGCTCTAACGTCGACT ACTCCGCAGCGCACCCGATCTGAACTGATGAAAGATTTGCGGAATTCGAG CCCCATGAGTAAGCTAATTTATGTCACACCTGAGAAGATAACCAGGAGCC AAGCATTCTTCGATATAATGTCGGCGCTCGTGTCCAAGAATTTGCTACAG CGATTTGTCATTGACGAAGCACATTGCGTCTCTCAATGGGGACACGATTT TCGCCCTGACTATAAACAGCTGGCTGTTTTCAAGGAGCGCTTTCCTCAAG TGCCCCTGATGGCCTTGACTGCCACGGCTACCCCAGAAGTTCGCGAGGAC GTGAAGGTTCAACTCCGGATAAGCAGAGACTGTGTAATGTTTAAGCAGAG CTTCAACCGACGGAATTTGGTCTATGAAGTACGGAAGAAAAAGAAAGCGG TTGTTGATGAAATAGCACAGGAAATCAAAACGATCCATCAAGGAGAAGCT GGTATTATATATTGCTTCAGCCAGAGAGATTGTGTAAATGTGGCAGACAC TCTGTTGAAGAAGTATGGCCTCAGTGCCTTGCCTTATCACGCTGGTTTGC CAGACGGCGTTCGTCGAGGAAACCAAGAAGCCTGGTCAGATGGGAGAGCT CAAATTATTTGCAGCACTCTTGCTTTTGGTATGGGTATAGACAAGGCAAA CGTTCGTTTCGTTTATCATCACACACTACCCAAGACTATTGAAGGATACT ACCAAGAAAGTGGCAGGGCTGGGAGAGATGGGCAGGTGAGCAGATGTATT CTGTATTTCAGTATGGCGGACAGGATGAAAGTTCTCAACATGATTTTGCA GGATGCTCCCGGAGGAAATCCATATAGAGGGCAAGGCCGCAGTCGTGGGA GGAAGAGAAGAATGACAATACCAATTCGAACAACAGGAACAGAAATGAAC GAAGGGCAAGTTTTGAGGCATACCCAGGGTTTGGCAAAAATGACGGCATA CTGCCTAAACGATATTGCATGTCGAAGGACGCAGCTGCTGGCTCACTTTG ACGAGCGTTTTGATCCGATCAATTGCAATCCAAAGTGCGACAATTGCAAG AACACGAAGGGTTTGCTATACAACGTTGATGTTTCTGACCATGCATTATC AATCACAGACATCATAAGACTGTGTCAAAAAGGTGTCACGCGTATCTCAG GCCAGTCAGCTGCATATATTGTGGAATTCTATATGGGAAGGAAGTCCCGA ATCAAGAACACTGACCACCTTCATCACGAACTGTTTGGGGGCGGAAAGGG CTCCTTGAAGGACAACGAAATCTATCGCATTATTGAAGAGCTGTGTACTT TACAAATTGTTTCTGTCTGCTGTGAGATTAACGCGTACGGGGGCGTTCAA TCGCAGTTGATTCTAAGTCGAAGAACAGAACCTCTGAGAAAACTCAAGAC TGGAGAGACGCGAATTTCTCTCCAGTCTCGTGGTAAGCCGAGCAGTAAGG ACATCATCGCGAGGAAATCAAATCAATACAAGATCCGTGATTATTCTAGA TCAGCTATGGAAGCTCCAGCTTTCAATGATGAGATCAATGACAACATGAT GAACACAGACGAAGATTTTATCGACATCGACATTGACATCCACAGGCAAG TCCCCCCTACTGAAGCAGATGGGCCGAGAACAGAAGTTGTATCGCCTTAC TTTGGGCAGCTTTCCGCTGCAGTTGCTGCCAATGTGGACGACACTGAAAA ACGCAGCGACTCAGAGAAGACCCCTGAGATTCATACCAGAAAACGGTTGA AAGCATTCCCGAGCGACACTATAATAATTCTGGATGACACTAACGAAACT AACAATCGAAAGGACATGAGGCCCGGTAAACCGGCCGCATCCGTTTCGCG AGCAAAGTCGGTGAGACCACCGCCCGCACCAATGTCGCGTGTGAAGTCGG TGAGACCGCCACCAGCGCGCACCAAACGCAAGAGAAATTCTCTTGTCTGA
back to top

Coding sequence (CDS) from alignment at tig00000120_pilon:285178..289227-

>Ggra3140.t1 ID=Ggra3140.t1|Name=Ggra3140.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=4050bp|location=Sequence derived from alignment at tig00000120_pilon:285178..289227- (Gracilaria gracilis GNS1m male)
ATGCATGAAGATGCCTCGGCGCTCAGAGCGCCGCAATGTCGCACCTCCCT
CCCTATAGTGCGCGATTTCTTTAGCTCACCAAATGCATCTGCGTCCGGGC
CATCTCCTCCAATGTTATCGAGAGCTGGTGAGACTGAGAGTGCGAGGAAT
GTGAGTACACGTCCGCCAACAGCACCTCCTCCTCCCAGAGTTCTCAAACG
AGCACGACGCGCACCTCCGAGTTCAAGGCCGTCTACGAGAGTACGGCAGC
ACAATGCTGTTGCTCAGAATGCCTCTGGTCCTCATCAAAACTTCGCTTCT
GAAAGGAATCAAGTTCAATCTTATAGCAACCTTCCGTCTTCTGGGCGACG
CCAGTCCCACACAGGGATTACTATGTTGCACAATGGAAATGTGTCGAATG
TTAGAGATTCATCGTTTACTCGGACCACGGCCAATGATACGAGAGGTGGC
GTTCAGCAAGAACCTGGTGAAAGGCAATCAAGAATGCCACCGGTTGGGCT
GATTTCTGGTGCTGCATCGCCAGCGAATCGAAAGACGTCCAATAATCCCT
CAAGAGACATAAGAGGAAACGGACCCGTTTTGAATGACTTTCTGTCTCCC
AAATCAGAATTTGAAGACGATATCGAGGAATTCACTCGTCCGGACACTCA
GTTCCAGCAAATACGACAAAGACAACACCAGAGCCTTGGTGCGAGAAATC
CAGAAGACATGGCGATCTCAGCGGTGGGAAGCTCAGTAACCAAGGGTTCC
ATGAGCAATTCAAAACGTTCTCGAACCCTCGTGTCGCCTGGGGCTGCGCA
ATCCACGAGAATACGAACCGCGGGAACAGCTTCAGTGCCAGTAGAAAACA
CAGATGCTGATGACGAGTTGCTCGCGAACTTAGACCTTGAATCTGTTATC
GCCGAGAGTCGACGGCAATGGAGACCTCCCACCCCATCCTCTATGCGAAA
CACTGCTCAGGTCCCACAGCAGAGTTTGAGTAACCGAAATACAACTCCGG
TCGCACACCGTCCCACCCCATTGTCAAATGGATCTCCAGACAATGAGGAA
GTCAGGAAGCTTAAGCGTCGTATAAAGGCCCTTCACGAAAGCTTGTACCA
TATATCTTCTTTGCTAGTCATGGAGGACGACGAGACTTCCATCATCCGGT
ACGAAGAAACAAAGCAAGAGCAATCGAAACTTCTTGATGAACTCAACGAA
CGTCTGCGAAACCTACGAGCTGGAATTCCCGCGAACACTCCAGGGTCCTT
TGGAGCAAAGGGACAGAGAGCCCTTGCTTCTCAGCACTACTCCCCGGTGA
CGCCCAGCAATCCAACATTTTCTCGTCTTCCGCCTCAACAGAACATCAAT
CCCGTTCCGTTCGACAATTCGAGCTGTTTTTCTTCCAATCCAGTTTCAGC
ACCGCAACAATCCCTTCAACAATGCGCACCGCCACCACCGAGCAATATCA
ATATAACAAACAACTATTACCCTCCAACCATAGGACCATCTGACGGCGGA
GCTCATAGTTCTCAACCACAACGTGACTTCAATGGTGACGTAGACCAATA
TCACTCTGTTGGTTGCGGGAACGATTTCCAAAACAATCGTCCTTCGAATA
TTCCCGTAGACCTACAAGCTTTACGTTCTCGCCCAGAAGACCATAACGAC
CATGACGAGGGACTTTTCCACGAAGAAGACCCACAAATGGAGCACGTTAT
GGCTTTTACCCCGACAAAGGCGCCCAAAGAGGGAACCTTGAGGGATCTAC
AAGGCTCTCAGTTGCCGGTGTTTGGTCCAAATGATAGAGCGGCCTTCGAG
TGGCGCGATGAAGGTGGGAGTAAGTTTCCCTGGTCTCTCCAGTTGGCTAT
TGAGAATCGGTCTGTCTTTGGAAACCCAGGCTTTCGGCCTAACCAGAGGG
AAGCTATGAATGCAGCACTCTCTGGTAAGGATGTCTTTGTTCTCATGCCG
ACAGGAGGTGGAAAGTCACTTTGCTACCAGCTTCCTGCTATAATGCGTCC
TGGCGTTACTGTAGTTGTATCTCCTCTTGTATCTCTAATCCAGGATCAAG
TAGATCATCTTTGGTCGAAGCAGATTCCATGCGGAGCTCTAACGTCGACT
ACTCCGCAGCGCACCCGATCTGAACTGATGAAAGATTTGCGGAATTCGAG
CCCCATGAGTAAGCTAATTTATGTCACACCTGAGAAGATAACCAGGAGCC
AAGCATTCTTCGATATAATGTCGGCGCTCGTGTCCAAGAATTTGCTACAG
CGATTTGTCATTGACGAAGCACATTGCGTCTCTCAATGGGGACACGATTT
TCGCCCTGACTATAAACAGCTGGCTGTTTTCAAGGAGCGCTTTCCTCAAG
TGCCCCTGATGGCCTTGACTGCCACGGCTACCCCAGAAGTTCGCGAGGAC
GTGAAGGTTCAACTCCGGATAAGCAGAGACTGTGTAATGTTTAAGCAGAG
CTTCAACCGACGGAATTTGGTCTATGAAGTACGGAAGAAAAAGAAAGCGG
TTGTTGATGAAATAGCACAGGAAATCAAAACGATCCATCAAGGAGAAGCT
GGTATTATATATTGCTTCAGCCAGAGAGATTGTGTAAATGTGGCAGACAC
TCTGTTGAAGAAGTATGGCCTCAGTGCCTTGCCTTATCACGCTGGTTTGC
CAGACGGCGTTCGTCGAGGAAACCAAGAAGCCTGGTCAGATGGGAGAGCT
CAAATTATTTGCAGCACTCTTGCTTTTGGTATGGGTATAGACAAGGCAAA
CGTTCGTTTCGTTTATCATCACACACTACCCAAGACTATTGAAGGATACT
ACCAAGAAAGTGGCAGGGCTGGGAGAGATGGGCAGGTGAGCAGATGTATT
CTGTATTTCAGTATGGCGGACAGGATGAAAGTTCTCAACATGATTTTGCA
GGATGCTCCCGGAGGAAATCCATATAGAGGGCAAGGCCGCAGTCGTGGGA
GGAAGAGAAGAATGACAATACCAATTCGAACAACAGGAACAGAAATGAAC
GAAGGGCAAGTTTTGAGGCATACCCAGGGTTTGGCAAAAATGACGGCATA
CTGCCTAAACGATATTGCATGTCGAAGGACGCAGCTGCTGGCTCACTTTG
ACGAGCGTTTTGATCCGATCAATTGCAATCCAAAGTGCGACAATTGCAAG
AACACGAAGGGTTTGCTATACAACGTTGATGTTTCTGACCATGCATTATC
AATCACAGACATCATAAGACTGTGTCAAAAAGGTGTCACGCGTATCTCAG
GCCAGTCAGCTGCATATATTGTGGAATTCTATATGGGAAGGAAGTCCCGA
ATCAAGAACACTGACCACCTTCATCACGAACTGTTTGGGGGCGGAAAGGG
CTCCTTGAAGGACAACGAAATCTATCGCATTATTGAAGAGCTGTGTACTT
TACAAATTGTTTCTGTCTGCTGTGAGATTAACGCGTACGGGGGCGTTCAA
TCGCAGTTGATTCTAAGTCGAAGAACAGAACCTCTGAGAAAACTCAAGAC
TGGAGAGACGCGAATTTCTCTCCAGTCTCGTGGTAAGCCGAGCAGTAAGG
ACATCATCGCGAGGAAATCAAATCAATACAAGATCCGTGATTATTCTAGA
TCAGCTATGGAAGCTCCAGCTTTCAATGATGAGATCAATGACAACATGAT
GAACACAGACGAAGATTTTATCGACATCGACATTGACATCCACAGGCAAG
TCCCCCCTACTGAAGCAGATGGGCCGAGAACAGAAGTTGTATCGCCTTAC
TTTGGGCAGCTTTCCGCTGCAGTTGCTGCCAATGTGGACGACACTGAAAA
ACGCAGCGACTCAGAGAAGACCCCTGAGATTCATACCAGAAAACGGTTGA
AAGCATTCCCGAGCGACACTATAATAATTCTGGATGACACTAACGAAACT
AACAATCGAAAGGACATGAGGCCCGGTAAACCGGCCGCATCCGTTTCGCG
AGCAAAGTCGGTGAGACCACCGCCCGCACCAATGTCGCGTGTGAAGTCGG
TGAGACCGCCACCAGCGCGCACCAAACGCAAGAGAAATTCTCTTGTCTGA
back to top