|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 109760.SPPG_05450T0 |
| PFAMs | GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3,HBS1_N |
| Max annot lvl | 4751|Fungi |
| KEGG ko | ko:K12595,ko:K14416 |
| KEGG Pathway | ko03015,ko03018,ko05134,map03015,map03018,map05134 |
| GOs | GO:0000166,GO:0000184,GO:0000288,GO:0000291,GO:0000956,GO:0001882,GO:0001883,GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006415,GO:0006417,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0006986,GO:0006996,GO:0007154,GO:0007165,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016075,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019222,GO:0019439,GO:0019538,GO:0022411,GO:0023052,GO:0030163,GO:0030674,GO:0030968,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0033554,GO:0034248,GO:0034250,GO:0034427,GO:0034620,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0034661,GO:0034976,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043928,GO:0043933,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051716,GO:0060090,GO:0060255,GO:0065007,GO:0070478,GO:0070481,GO:0070651,GO:0070887,GO:0070966,GO:0071310,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1903008,GO:1990533,GO:2000112 |
| Evalue | 2.86e-77 |
| EggNOG OGs | COG5256@1|root,KOG0458@2759|Eukaryota,38BRZ@33154|Opisthokonta,3NVR8@4751|Fungi |
| Description | Elongation factor |
| COG category | J |
| BRITE | ko00000,ko00001,ko03019 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra3132.t1.start1 | Ggra3132.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000120_pilon 264448..264450 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra3132.t1.stop1 | Ggra3132.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000120_pilon 266626..266628 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra3132.t1 ID=Ggra3132.t1|Name=Ggra3132.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=727bp MSRHRHIRNLRYDDYMDDDYYDDDYYEEEEEPPVHEEQQQNVENPDELFD DLVQQFREHLQDETLSAAEVDSAIIAANYDIDQALKQIRLQREGSVEVER KRLTELELKTPSDLGQLVSDGTERQVLPLPPESAVNVNDLELAGFSTVMH LTPPSQWNAEPYNFEDPSPDDVIFSKQKKASKRIQTIRFPKASALRGSSS KSVSLGSKNAPEKSPSKPQPKPSSSAAPKRQVNESKAASKSSRRQKPNSR KNTAAEKPPEGQRQKEIDLSQRVKKGSTSIPIVIAGHVDAGKSTLLGQLL KQVKSKSTGKTKRRKALQDIAWETDEDGVERERGVTIDIATRVFESHGRK YALIDAPGHRDFVPAMILGAAQASAAILVVDSSPGEFESGFSESGQTREH TLVLKALGVSRLIVVVNKMDMVSYKKERYLEVTQKIQNYLGSNGWKTSKS VSFVAASGREGINLTSSPGKNHPLSQWYKGSTLLGEIEKLETISISSIEA DSQKSTRFVVSDFFRSVSLGGDGAVTGRLICGSIAPKDRLVLSPGSATVA VKAVEVAPGERGQVAIAGVDSLPVSLSLQNLTEGLLISPGNVLCDPRKPV PVATKFRAQLITTSTQAVLLQGTCGVLHIGGGAEAASITRLIEFVQTKRG GKDGKKRVPRRLVKGDSAIVEIKCDRGVAMETSSEVKGLGRFAFRQNGLT LAVGLVQEIVETSGDDAEGKALGPAN* back to topspliced messenger RNA >Ggra3132.t1 ID=Ggra3132.t1|Name=Ggra3132.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2181bp|location=Sequence derived from alignment at tig00000120_pilon:264448..266628+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGTCTCGTCATCGGCACATCCGTAATTTGcgatacgatgactacatgga cgatgactactacgatgacgattactatgaagaagaagaagaACCTCCCG TGCACGAGGAACAGCAACAGAATGTGGAGAATCCGGACGAACTTTTCGAC GACCTTGTCCAGCAATTTAGAGAACATTTACAAGATGAAACTCTCTCCGC TGCCGAAGTGGATTCCGCAATCATCGCTGCGAACTACGACATCGACCAAG CCCTCAAGCAAATCCGGCTTCAGAGAGAGGGTTCAGTCGAAGTCGAGCGG AAAAGACTTACTGAACTCGAGCTAAAGACTCCTTCAGATCTGGGGCAGCT AGTTTCAGATGGAACAGAGCGTCAAGTGTTACCCCTCCCCCCCGAGTCCG CAGTCAATGTCAACGACCTTGAACTCGCAGGGTTCTCAACTGTCATGCAC TTAACGCCGCCATCGCAATGGAATGCGGAGCCATACAATTTTGAGGATCC GTCTCCGGATGATGTTATTTTCTCAAAGCAAAAGAAGGCTTCTAAGCGGA TACAAACAATACGGTTCCCCAAAGCTTCAGCACTTCGCGGCTCCTCATCA AAATCTGTTTCTCTAGGGTCCAAAAATGCACCTGAAAAGTCTCCGTCGAA ACCCCAACCGAAACCGTCAAGCTCTGCAGCACCGAAACGTCAAGTCAATG AAAGCAAAGCGGCTTCGAAGTCCTCGAGAAGACAGAAGCCGAATTCAAGG AAAAACACGGCAGCAGAGAAGCCTCCAGAGGGGCAACGTCAGAAAGAAAT CGACCTCTCACAAAGAGTGAAGAAAGGTTCAACTTCCATACCTATTGTTA TAGCCGGTCACGTTGATGCAGGCAAGAGCACCCTGTTGGGGCAATTACTG AAGCAAGTAAAGTCCAAATCTACCGGAAAAACGAAGAGGCGAAAAGCACT ACAGGATATCGCCTGGGAAACTGATGAAGATGGTGTGGAACGTGAGAGGG GCGTAACTATAGACATTGCAACAAGAGTCTTCGAAAGCCATGGACGAAAG TATGCCCTCATCGATGCCCCTGGACATCGGGATTTTGTGCCTGCAATGAT TCTAGGAGCTGCCCAGGCTTCTGCCGCTATTCTGGTGGTTGATTCTTCTC CTGGTGAGTTTGAGTCCGGATTTTCTGAGAGCGGGCAGACGAGAGAACAT ACATTAGTCTTGAAAGCCCTTGGGGTAAGCAGACTGATTGTGGTTGTGAA CAAAATGGACATGGTCTCATACAAAAAAGAACGATACTTGGAAGTAACGC AGAAGATTCAAAACTATCTTGGAAGCAACGGATGGAAGACTTCGAAGAGC GTGAGCTTTGTCGCAGCATCGGGGAGGGAAGGTATTAATCTTACTTCTTC TCCGGGCAAGAACCATCCCTTATCACAATGGTACAAAGGAAGTACCCTAC TTGGAGAGATTGAAAAGTTGGAGACCATCAGTATCTCAAGTATTGAAGCA GACAGTCAGAAATCAACGCGTTTCGTTGTTTCGGACTTCTTCAGGAGTGT TTCGTTGGGTGGGGACGGTGCTGTCACGGGTCGATTAATTTGTGGTTCAA TTGCTCCAAAAGACCGTCTCGTCCTTAGCCCAGGAAGTGCGACAGTGGCT GTTAAAGCCGTTGAAGTAGCGCCCGGGGAAAGGGGTCAAGTGGCGATTGC AGGCGTTGACAGTCTACCGGTATCTTTAAGTCTGCAGAATCTCACTGAAG GACTTTTGATTTCTCCCGGTAACGTACTATGTGATCCCCGAAAACCAGTG CCAGTTGCTACAAAGTTCCGAGCACAGCTGATTACGACATCCACCCAAGC AGTCCTGCTGCAGGGAACCTGCGGGGTGTTACATATAGGAGGTGGAGCTG AAGCAGCTTCAATAACCAGACTAATTGAATTCGTGCAAACAAAGAGGGGG GGAAAGGATGGCAAAAAGAGAGTCCCGCGACGCTTGGTTAAGGGAGACTC GGCTATCGTAGAAATCAAATGCGACCGTGGAGTTGCGATGGAAACTTCAT CCGAAGTTAAGGGGCTCGGGAGGTTTGCCTTCCGTCAAAACGGACTCACA CTCGCAGTCGGGCTTGTACAAGAAATTGTGGAAACTTCAGGAGATGATGC GGAGGGCAAAGCTCTAGGACCTGCTAACTAA back to topprotein sequence of Ggra3132.t1 >Ggra3132.t1 ID=Ggra3132.t1|Name=Ggra3132.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=727bp
MSRHRHIRNLRYDDYMDDDYYDDDYYEEEEEPPVHEEQQQNVENPDELFD DLVQQFREHLQDETLSAAEVDSAIIAANYDIDQALKQIRLQREGSVEVER KRLTELELKTPSDLGQLVSDGTERQVLPLPPESAVNVNDLELAGFSTVMH LTPPSQWNAEPYNFEDPSPDDVIFSKQKKASKRIQTIRFPKASALRGSSS KSVSLGSKNAPEKSPSKPQPKPSSSAAPKRQVNESKAASKSSRRQKPNSR KNTAAEKPPEGQRQKEIDLSQRVKKGSTSIPIVIAGHVDAGKSTLLGQLL KQVKSKSTGKTKRRKALQDIAWETDEDGVERERGVTIDIATRVFESHGRK YALIDAPGHRDFVPAMILGAAQASAAILVVDSSPGEFESGFSESGQTREH TLVLKALGVSRLIVVVNKMDMVSYKKERYLEVTQKIQNYLGSNGWKTSKS VSFVAASGREGINLTSSPGKNHPLSQWYKGSTLLGEIEKLETISISSIEA DSQKSTRFVVSDFFRSVSLGGDGAVTGRLICGSIAPKDRLVLSPGSATVA VKAVEVAPGERGQVAIAGVDSLPVSLSLQNLTEGLLISPGNVLCDPRKPV PVATKFRAQLITTSTQAVLLQGTCGVLHIGGGAEAASITRLIEFVQTKRG GKDGKKRVPRRLVKGDSAIVEIKCDRGVAMETSSEVKGLGRFAFRQNGLT LAVGLVQEIVETSGDDAEGKALGPAN* back to topmRNA from alignment at tig00000120_pilon:264448..266628+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra3132.t1 ID=Ggra3132.t1|Name=Ggra3132.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2181bp|location=Sequence derived from alignment at tig00000120_pilon:264448..266628+ (Gracilaria gracilis GNS1m male) ATGTCTCGTCATCGGCACATCCGTAATTTGcgatacgatgactacatgga
cgatgactactacgatgacgattactatgaagaagaagaagaACCTCCCG
TGCACGAGGAACAGCAACAGAATGTGGAGAATCCGGACGAACTTTTCGAC
GACCTTGTCCAGCAATTTAGAGAACATTTACAAGATGAAACTCTCTCCGC
TGCCGAAGTGGATTCCGCAATCATCGCTGCGAACTACGACATCGACCAAG
CCCTCAAGCAAATCCGGCTTCAGAGAGAGGGTTCAGTCGAAGTCGAGCGG
AAAAGACTTACTGAACTCGAGCTAAAGACTCCTTCAGATCTGGGGCAGCT
AGTTTCAGATGGAACAGAGCGTCAAGTGTTACCCCTCCCCCCCGAGTCCG
CAGTCAATGTCAACGACCTTGAACTCGCAGGGTTCTCAACTGTCATGCAC
TTAACGCCGCCATCGCAATGGAATGCGGAGCCATACAATTTTGAGGATCC
GTCTCCGGATGATGTTATTTTCTCAAAGCAAAAGAAGGCTTCTAAGCGGA
TACAAACAATACGGTTCCCCAAAGCTTCAGCACTTCGCGGCTCCTCATCA
AAATCTGTTTCTCTAGGGTCCAAAAATGCACCTGAAAAGTCTCCGTCGAA
ACCCCAACCGAAACCGTCAAGCTCTGCAGCACCGAAACGTCAAGTCAATG
AAAGCAAAGCGGCTTCGAAGTCCTCGAGAAGACAGAAGCCGAATTCAAGG
AAAAACACGGCAGCAGAGAAGCCTCCAGAGGGGCAACGTCAGAAAGAAAT
CGACCTCTCACAAAGAGTGAAGAAAGGTTCAACTTCCATACCTATTGTTA
TAGCCGGTCACGTTGATGCAGGCAAGAGCACCCTGTTGGGGCAATTACTG
AAGCAAGTAAAGTCCAAATCTACCGGAAAAACGAAGAGGCGAAAAGCACT
ACAGGATATCGCCTGGGAAACTGATGAAGATGGTGTGGAACGTGAGAGGG
GCGTAACTATAGACATTGCAACAAGAGTCTTCGAAAGCCATGGACGAAAG
TATGCCCTCATCGATGCCCCTGGACATCGGGATTTTGTGCCTGCAATGAT
TCTAGGAGCTGCCCAGGCTTCTGCCGCTATTCTGGTGGTTGATTCTTCTC
CTGGTGAGTTTGAGTCCGGATTTTCTGAGAGCGGGCAGACGAGAGAACAT
ACATTAGTCTTGAAAGCCCTTGGGGTAAGCAGACTGATTGTGGTTGTGAA
CAAAATGGACATGGTCTCATACAAAAAAGAACGATACTTGGAAGTAACGC
AGAAGATTCAAAACTATCTTGGAAGCAACGGATGGAAGACTTCGAAGAGC
GTGAGCTTTGTCGCAGCATCGGGGAGGGAAGGTATTAATCTTACTTCTTC
TCCGGGCAAGAACCATCCCTTATCACAATGGTACAAAGGAAGTACCCTAC
TTGGAGAGATTGAAAAGTTGGAGACCATCAGTATCTCAAGTATTGAAGCA
GACAGTCAGAAATCAACGCGTTTCGTTGTTTCGGACTTCTTCAGGAGTGT
TTCGTTGGGTGGGGACGGTGCTGTCACGGGTCGATTAATTTGTGGTTCAA
TTGCTCCAAAAGACCGTCTCGTCCTTAGCCCAGGAAGTGCGACAGTGGCT
GTTAAAGCCGTTGAAGTAGCGCCCGGGGAAAGGGGTCAAGTGGCGATTGC
AGGCGTTGACAGTCTACCGGTATCTTTAAGTCTGCAGAATCTCACTGAAG
GACTTTTGATTTCTCCCGGTAACGTACTATGTGATCCCCGAAAACCAGTG
CCAGTTGCTACAAAGTTCCGAGCACAGCTGATTACGACATCCACCCAAGC
AGTCCTGCTGCAGGGAACCTGCGGGGTGTTACATATAGGAGGTGGAGCTG
AAGCAGCTTCAATAACCAGACTAATTGAATTCGTGCAAACAAAGAGGGGG
GGAAAGGATGGCAAAAAGAGAGTCCCGCGACGCTTGGTTAAGGGAGACTC
GGCTATCGTAGAAATCAAATGCGACCGTGGAGTTGCGATGGAAACTTCAT
CCGAAGTTAAGGGGCTCGGGAGGTTTGCCTTCCGTCAAAACGGACTCACA
CTCGCAGTCGGGCTTGTACAAGAAATTGTGGAAACTTCAGGAGATGATGC
GGAGGGCAAAGCTCTAGGACCTGCTAACTAA back to topCoding sequence (CDS) from alignment at tig00000120_pilon:264448..266628+ >Ggra3132.t1 ID=Ggra3132.t1|Name=Ggra3132.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2181bp|location=Sequence derived from alignment at tig00000120_pilon:264448..266628+ (Gracilaria gracilis GNS1m male) ATGTCTCGTCATCGGCACATCCGTAATTTGcgatacgatgactacatgga cgatgactactacgatgacgattactatgaagaagaagaagaACCTCCCG TGCACGAGGAACAGCAACAGAATGTGGAGAATCCGGACGAACTTTTCGAC GACCTTGTCCAGCAATTTAGAGAACATTTACAAGATGAAACTCTCTCCGC TGCCGAAGTGGATTCCGCAATCATCGCTGCGAACTACGACATCGACCAAG CCCTCAAGCAAATCCGGCTTCAGAGAGAGGGTTCAGTCGAAGTCGAGCGG AAAAGACTTACTGAACTCGAGCTAAAGACTCCTTCAGATCTGGGGCAGCT AGTTTCAGATGGAACAGAGCGTCAAGTGTTACCCCTCCCCCCCGAGTCCG CAGTCAATGTCAACGACCTTGAACTCGCAGGGTTCTCAACTGTCATGCAC TTAACGCCGCCATCGCAATGGAATGCGGAGCCATACAATTTTGAGGATCC GTCTCCGGATGATGTTATTTTCTCAAAGCAAAAGAAGGCTTCTAAGCGGA TACAAACAATACGGTTCCCCAAAGCTTCAGCACTTCGCGGCTCCTCATCA AAATCTGTTTCTCTAGGGTCCAAAAATGCACCTGAAAAGTCTCCGTCGAA ACCCCAACCGAAACCGTCAAGCTCTGCAGCACCGAAACGTCAAGTCAATG AAAGCAAAGCGGCTTCGAAGTCCTCGAGAAGACAGAAGCCGAATTCAAGG AAAAACACGGCAGCAGAGAAGCCTCCAGAGGGGCAACGTCAGAAAGAAAT CGACCTCTCACAAAGAGTGAAGAAAGGTTCAACTTCCATACCTATTGTTA TAGCCGGTCACGTTGATGCAGGCAAGAGCACCCTGTTGGGGCAATTACTG AAGCAAGTAAAGTCCAAATCTACCGGAAAAACGAAGAGGCGAAAAGCACT ACAGGATATCGCCTGGGAAACTGATGAAGATGGTGTGGAACGTGAGAGGG GCGTAACTATAGACATTGCAACAAGAGTCTTCGAAAGCCATGGACGAAAG TATGCCCTCATCGATGCCCCTGGACATCGGGATTTTGTGCCTGCAATGAT TCTAGGAGCTGCCCAGGCTTCTGCCGCTATTCTGGTGGTTGATTCTTCTC CTGGTGAGTTTGAGTCCGGATTTTCTGAGAGCGGGCAGACGAGAGAACAT ACATTAGTCTTGAAAGCCCTTGGGGTAAGCAGACTGATTGTGGTTGTGAA CAAAATGGACATGGTCTCATACAAAAAAGAACGATACTTGGAAGTAACGC AGAAGATTCAAAACTATCTTGGAAGCAACGGATGGAAGACTTCGAAGAGC GTGAGCTTTGTCGCAGCATCGGGGAGGGAAGGTATTAATCTTACTTCTTC TCCGGGCAAGAACCATCCCTTATCACAATGGTACAAAGGAAGTACCCTAC TTGGAGAGATTGAAAAGTTGGAGACCATCAGTATCTCAAGTATTGAAGCA GACAGTCAGAAATCAACGCGTTTCGTTGTTTCGGACTTCTTCAGGAGTGT TTCGTTGGGTGGGGACGGTGCTGTCACGGGTCGATTAATTTGTGGTTCAA TTGCTCCAAAAGACCGTCTCGTCCTTAGCCCAGGAAGTGCGACAGTGGCT GTTAAAGCCGTTGAAGTAGCGCCCGGGGAAAGGGGTCAAGTGGCGATTGC AGGCGTTGACAGTCTACCGGTATCTTTAAGTCTGCAGAATCTCACTGAAG GACTTTTGATTTCTCCCGGTAACGTACTATGTGATCCCCGAAAACCAGTG CCAGTTGCTACAAAGTTCCGAGCACAGCTGATTACGACATCCACCCAAGC AGTCCTGCTGCAGGGAACCTGCGGGGTGTTACATATAGGAGGTGGAGCTG AAGCAGCTTCAATAACCAGACTAATTGAATTCGTGCAAACAAAGAGGGGG GGAAAGGATGGCAAAAAGAGAGTCCCGCGACGCTTGGTTAAGGGAGACTC GGCTATCGTAGAAATCAAATGCGACCGTGGAGTTGCGATGGAAACTTCAT CCGAAGTTAAGGGGCTCGGGAGGTTTGCCTTCCGTCAAAACGGACTCACA CTCGCAGTCGGGCTTGTACAAGAAATTGTGGAAACTTCAGGAGATGATGC GGAGGGCAAAGCTCTAGGACCTGCTAACTAA back to top
|