Ggra2991.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2991.t1
Unique NameGgra2991.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length190
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000858_piloncontigtig00000858_pilon:826109..826678 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2991Ggra2991Gracilaria gracilis GNS1m malegenetig00000858_pilon 826109..826678 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2991.t1.stop1Ggra2991.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000858_pilon 826109..826111 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2991.t1.CDS1Ggra2991.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000858_pilon 826109..826678 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2991.t1.exon1Ggra2991.t1.exon1Gracilaria gracilis GNS1m maleexontig00000858_pilon 826109..826678 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2991.t1.start1Ggra2991.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000858_pilon 826676..826678 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2991.t1Ggra2991.t1Gracilaria gracilis GNS1m malepolypeptidetig00000858_pilon 826109..826678 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2991.t1 ID=Ggra2991.t1|Name=Ggra2991.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=190bp
MESRLRSQTKSIVASLTSAVHIAYGATLMLIALLSILLTWVLYKVYPPSI
FLLIFIVVLVVMYINSKKELADEVLEQIDAAVSPSQTEESGQTPQQQKTI
LQRVLHKGVDAILSAAADSFMIVPAIIALIGVVLLVLGYHPFGATVLFFA
ACVLAITGCSCSIVKRLAYAWIDRLVLPSSTDETTALVT*
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spliced messenger RNA

>Ggra2991.t1 ID=Ggra2991.t1|Name=Ggra2991.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=570bp|location=Sequence derived from alignment at tig00000858_pilon:826109..826678- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGAGTCGGCTGCGATCCCAGACAAAAAGCATTGTTGCGAGTCTCAC
ATCCGCAGTTCATATCGCTTATGGTGCGACGTTGATGCTCATTGCTCTCC
TCTCTATACTGTTGACATGGGTTCTATATAAAGTGTACCCTCCGTCTATA
TTCCTTCTGATATTCATCGTTGTGCTCGTCGTGATGTATATCAACTCCAA
GAAAGAGCTCGCAGACGAGGTCCTCGAACAGATCGATGCTGCTGTATCCC
CGTCGCAAACAGAGGAAAGTGGACAAACCCCACAGCAACAGAAGACCATC
TTGCAGCGCGTGCTTCATAAAGGAGTGGATGCTATCCTTTCGGCTGCGGC
AGATTCTTTTATGATTGTGCCTGCTATTATTGCTCTGATCGGTGTCGTTC
TCCTCGTGCTTGGTTATCACCCGTTTGGTGCGACTGTGTTGTTCTTCGCG
GCATGTGTTTTGGCAATTACAGGGTGTTCGTGTTCTATCGTTAAGAGGCT
TGCCTATGCTTGGATTGACAGACTGGTACTTCCCTCAAGCACAGATGAAA
CTACGGCCTTGGTGACATGA
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protein sequence of Ggra2991.t1

>Ggra2991.t1 ID=Ggra2991.t1|Name=Ggra2991.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=190bp
MESRLRSQTKSIVASLTSAVHIAYGATLMLIALLSILLTWVLYKVYPPSI
FLLIFIVVLVVMYINSKKELADEVLEQIDAAVSPSQTEESGQTPQQQKTI
LQRVLHKGVDAILSAAADSFMIVPAIIALIGVVLLVLGYHPFGATVLFFA
ACVLAITGCSCSIVKRLAYAWIDRLVLPSSTDETTALVT*
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mRNA from alignment at tig00000858_pilon:826109..826678-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2991.t1 ID=Ggra2991.t1|Name=Ggra2991.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=570bp|location=Sequence derived from alignment at tig00000858_pilon:826109..826678- (Gracilaria gracilis GNS1m male)
ATGGAGAGTCGGCTGCGATCCCAGACAAAAAGCATTGTTGCGAGTCTCAC
ATCCGCAGTTCATATCGCTTATGGTGCGACGTTGATGCTCATTGCTCTCC
TCTCTATACTGTTGACATGGGTTCTATATAAAGTGTACCCTCCGTCTATA
TTCCTTCTGATATTCATCGTTGTGCTCGTCGTGATGTATATCAACTCCAA
GAAAGAGCTCGCAGACGAGGTCCTCGAACAGATCGATGCTGCTGTATCCC
CGTCGCAAACAGAGGAAAGTGGACAAACCCCACAGCAACAGAAGACCATC
TTGCAGCGCGTGCTTCATAAAGGAGTGGATGCTATCCTTTCGGCTGCGGC
AGATTCTTTTATGATTGTGCCTGCTATTATTGCTCTGATCGGTGTCGTTC
TCCTCGTGCTTGGTTATCACCCGTTTGGTGCGACTGTGTTGTTCTTCGCG
GCATGTGTTTTGGCAATTACAGGGTGTTCGTGTTCTATCGTTAAGAGGCT
TGCCTATGCTTGGATTGACAGACTGGTACTTCCCTCAAGCACAGATGAAA
CTACGGCCTTGGTGACATGA
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Coding sequence (CDS) from alignment at tig00000858_pilon:826109..826678-

>Ggra2991.t1 ID=Ggra2991.t1|Name=Ggra2991.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=570bp|location=Sequence derived from alignment at tig00000858_pilon:826109..826678- (Gracilaria gracilis GNS1m male)
ATGGAGAGTCGGCTGCGATCCCAGACAAAAAGCATTGTTGCGAGTCTCAC
ATCCGCAGTTCATATCGCTTATGGTGCGACGTTGATGCTCATTGCTCTCC
TCTCTATACTGTTGACATGGGTTCTATATAAAGTGTACCCTCCGTCTATA
TTCCTTCTGATATTCATCGTTGTGCTCGTCGTGATGTATATCAACTCCAA
GAAAGAGCTCGCAGACGAGGTCCTCGAACAGATCGATGCTGCTGTATCCC
CGTCGCAAACAGAGGAAAGTGGACAAACCCCACAGCAACAGAAGACCATC
TTGCAGCGCGTGCTTCATAAAGGAGTGGATGCTATCCTTTCGGCTGCGGC
AGATTCTTTTATGATTGTGCCTGCTATTATTGCTCTGATCGGTGTCGTTC
TCCTCGTGCTTGGTTATCACCCGTTTGGTGCGACTGTGTTGTTCTTCGCG
GCATGTGTTTTGGCAATTACAGGGTGTTCGTGTTCTATCGTTAAGAGGCT
TGCCTATGCTTGGATTGACAGACTGGTACTTCCCTCAAGCACAGATGAAA
CTACGGCCTTGGTGACATGA
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