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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005709216.1 |
| Preferred name | SLC9C1 |
| PFAMs | Ion_trans,Na_H_Exchanger,cNMP_binding |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K14726 |
| KEGG TC | 2.A.36 |
| GOs | GO:0000302,GO:0003674,GO:0005215,GO:0005451,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005929,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0006873,GO:0006885,GO:0006928,GO:0006950,GO:0006970,GO:0006979,GO:0008150,GO:0008324,GO:0009507,GO:0009526,GO:0009536,GO:0009628,GO:0009636,GO:0009651,GO:0009941,GO:0009987,GO:0010035,GO:0010351,GO:0010352,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015386,GO:0015491,GO:0015672,GO:0016020,GO:0019222,GO:0019725,GO:0022804,GO:0022821,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030004,GO:0030317,GO:0030641,GO:0031090,GO:0031253,GO:0031323,GO:0031514,GO:0031967,GO:0031975,GO:0034220,GO:0035725,GO:0040011,GO:0042221,GO:0042493,GO:0042542,GO:0042592,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044434,GO:0044435,GO:0044441,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0046677,GO:0046873,GO:0048870,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051453,GO:0051674,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0060170,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071944,GO:0097722,GO:0098588,GO:0098590,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098719,GO:0098739,GO:0098771,GO:0099516,GO:0099587,GO:0120025,GO:0120038,GO:0140115,GO:1901700,GO:1902600,GO:2000377 |
| Evalue | 2.7e-72 |
| EggNOG OGs | COG0025@1|root,KOG1965@2759|Eukaryota |
| Description | potassium:proton antiporter activity |
| COG category | P |
| BRITE | ko00000,ko02000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra2978.t1.stop1 | Ggra2978.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000858_pilon 755122..755124 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra2978.t1.intron1 | Ggra2978.t1.intron1 | Gracilaria gracilis GNS1m male | intron | tig00000858_pilon 755149..755207 - |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra2978.t1.start1 | Ggra2978.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000858_pilon 757398..757400 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra2978.t1 ID=Ggra2978.t1|Name=Ggra2978.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=740bp MDASLAALVRTSATKICGQSKSSCLLQNVNNCTNIDGVDLCSKNFTIIIF PFFALFIGVISMPLSKSVHVSYTLFILIVGIILGALGCGVDIGLLSVSLR QWVHLRPPTIFFYVFLAPLIFEASFNTRWHVFKKLLVPILTAAFIIVSLQ VALISFFQKVVIRTEGWSWWSALMFGSMLSATDPISVTATLKSLGASEAL NTLIEGESLVNDGSAFVLWEQFFENAQIDFKLGETAAEAAEAVARSSVEE TTKSAGEIVGAIFKLSIGGMVMGVAFGLVALIILSSVYDEFEVETSLTVI VAFLGFWTAQAPSKLSGVIANVASGLVISAFGRHLITPAVRGPLAEFWEL LGWIANTIVFVHAGVLLTAFTWSCAGKPHEVKDYAFILVWYLYLQLIRMG LFLLFRPILSWRNKWLGWKEALVVGFSGLRGAVSLILALEVAGSQELPEG VKSRVVLWTTGIVGLSLLVNGFLIKPVIHGMKLDRAEKSREEFMLRARAV MVQRTLQILDNLCVESGYKSARWSYVIKSVLPAEWLDEAEHVAGYRNAVE QLLDNAPASTRVSLDAVRVEERQKIMHTHLNHRLSQDIPTLGIRPSPTLS PGANQQDFHPSIRTSMSNMPFMFNNAAVVDTPHRSPTVPANLADLNPSFS PISIGVAARPSRFSMEGGAGLQHRRSIDADVVRYATTRLSIGQPHVQEPQ TAASIQKEIAQRYRDLGDHLDEFEETEKDREFGRVQCAH* back to topspliced messenger RNA >Ggra2978.t1 ID=Ggra2978.t1|Name=Ggra2978.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2220bp|location=Sequence derived from alignment at tig00000858_pilon:755122..757400- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGACGCCTCGCTCGCCGCGCTGGTGCGCACGAGCGCCACCAAGATCTG CGGCCAGTCCAAGTCCAGCTGCCTGCTGCAAAACGTCAACAACTGCACAA ACATAGATGGCGTCGACCTGTGCAGCAAGAACTTCACCATCATCATCTTC CCCTTCTTCGCGCTCTTCATCGGCGTCATCAGCATGCCGCTGTCCAAGTC CGTCCACGTGTCGTACACCCTCTTCATCCTCATCGTCGGCATCATCCTCG GCGCCTTGGGCTGCGGCGTTGACATTGGCTTGCTTTCCGTGTCGCTGCGC CAATGGGTCCATCTGCGCCCGCCCACCATCTTCTTCTACGTCTTCCTGGC GCCCCTCATCTTTGAGGCCTCGTTCAACACCCGCTGGCACGTCTTCAAGA AGCTGCTCGTCCCCATCCTCACCGCCGCCTTCATCATAGTCAGTCTGCAG GTAGCGCTCATCAGCTTCTTCCAAAAGGTTGTCATCCGCACCGAAGGCTG GTCCTGGTGGTCCGCCCTCATGTTCGGCTCCATGCTGTCCGCCACCGACC CCATCAGTGTCACCGCCACCCTCAAGTCGCTCGGCGCCTCCGAGGCGCTC AACACCCTCATCGAGGGCGAGTCGCTCGTCAACGACGGCTCCGCCTTCGT GCTGTGGGAGCAGTTTTTCGAAAACGCCCAGATCGACTTTAAGCTCGGCG AGACGGCCGCCGAGGCCGCCGAGGCCGTCGCGCGCTCCAGTGTGGAGGAG ACCACCAAGTCGGCGGGCGAGATTGTGGGCGCCATCTTCAAGCTCAGCAT TGGCGGCATGGTTATGGGCGTCGCCTTTGGCCTCGTCGCCCTCATCATTC TCAGCTCCGTCTATGACGAGTTTGAGGTCGAGACCTCGCTCACCGTCATT GTCGCCTTTCTGGGCTTTTGGACCGCGCAGGCCCCTTCCAAACTGTCGGG CGTTATCGCCAACGTTGCCTCGGGCTTGGTCATATCTGCGTTTGGGCGCC ACCTCATCACGCCTGCTGTTCGAGGGCCGCTTGCAGAGTTTTGGGAGCTA CTGGGCTGGATTGCCAACACCATTGTGTTTGTGCATGCGGGCGTGCTGCT CACTGCTTTCACATGGTCGTGTGCGGGCAAGCCGCATGAGGTCAAGGACT ATGCGTTTATCCTTGTGTGGTACTTGTATCTGCAGCTCATTCGTATGGGC CTGTTCCTGCTCTTCCGCCCCATCCTGTCGTGGCGCAACAAGTGGCTGGG CTGGAAGGAAGCGTTGGTGGTGGGCTTTAGCGGCCTTCGAGGCGCCGTGT CACTCATCCTCGCGCTGGAGGTGGCCGGCAGTCAGGAGCTTCCTGAGGGA GTCAAGTCGCGCGTCGTGCTGTGGACCACCGGTATTGTGGGGCTCAGCTT GCTCGTCAATGGCTTTTTGATCAAACCGGTGATTCACGGAATGAAGCTTG ACCGTGCCGAAAAGTCGAGGGAAGAGTTTATGCTTCGCGCGCGTGCTGTC ATGGTGCAGCGCACGCTGCAGATTTTGGATAACCTCTGTGTGGAATCGGG CTACAAGTCGGCGAGATGGTCGTATGTCATCAAGAGTGTGCTGCCGGCTG AATGGTTGGACGAAGCCGAACATGTCGCTGGCTATCGAAACGCTGTGGAG CAGCTGTTGGATAATGCGCCCGCTTCCACCAGGGTGAGTCTGGATGCTGT TCGTGTGGAAGAACGCCAAAAGATAATGCATACACACCTCAACCACCGTC TGAGTCAGGACATTCCCACGCTTGGCATTCGCCCGTCGCCTACGCTGTCG CCTGGAGCCAACCAGCAGGACTTCCATCCGAGTATCCGCACATCCATGAG CAACATGCCTTTCATGTTTAACAATGCGGCCGTCGTGGACACTCCTCACC GAAGCCCGACGGTTCCGGCCAACCTGGCGGACTTGAACCCTTCCTTCTCT CCCATCTCAATTGGCGTCGCTGCCAGACCGTCGCGCTTCAGCATGGAGGG CGGCGCTGGATTGCAGCATCGTCGCTCCATTGATGCCGATGTGGTGCGGT ACGCCACCACCAGACTCTCCATCGGTCAACCTCACGTTCAAGAACCGCAG ACCGCTGCGAGCATTCAAAAGGAGATTGCGCAACGCTATCGCGATTTGGG TGATCATCTGGATGAGTTTGAGGAGACGGAGAAGGATAGGGAATTTGGTA GAGTACAGTGTGCTCATTAA back to topprotein sequence of Ggra2978.t1 >Ggra2978.t1 ID=Ggra2978.t1|Name=Ggra2978.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=740bp
MDASLAALVRTSATKICGQSKSSCLLQNVNNCTNIDGVDLCSKNFTIIIF PFFALFIGVISMPLSKSVHVSYTLFILIVGIILGALGCGVDIGLLSVSLR QWVHLRPPTIFFYVFLAPLIFEASFNTRWHVFKKLLVPILTAAFIIVSLQ VALISFFQKVVIRTEGWSWWSALMFGSMLSATDPISVTATLKSLGASEAL NTLIEGESLVNDGSAFVLWEQFFENAQIDFKLGETAAEAAEAVARSSVEE TTKSAGEIVGAIFKLSIGGMVMGVAFGLVALIILSSVYDEFEVETSLTVI VAFLGFWTAQAPSKLSGVIANVASGLVISAFGRHLITPAVRGPLAEFWEL LGWIANTIVFVHAGVLLTAFTWSCAGKPHEVKDYAFILVWYLYLQLIRMG LFLLFRPILSWRNKWLGWKEALVVGFSGLRGAVSLILALEVAGSQELPEG VKSRVVLWTTGIVGLSLLVNGFLIKPVIHGMKLDRAEKSREEFMLRARAV MVQRTLQILDNLCVESGYKSARWSYVIKSVLPAEWLDEAEHVAGYRNAVE QLLDNAPASTRVSLDAVRVEERQKIMHTHLNHRLSQDIPTLGIRPSPTLS PGANQQDFHPSIRTSMSNMPFMFNNAAVVDTPHRSPTVPANLADLNPSFS PISIGVAARPSRFSMEGGAGLQHRRSIDADVVRYATTRLSIGQPHVQEPQ TAASIQKEIAQRYRDLGDHLDEFEETEKDREFGRVQCAH* back to topmRNA from alignment at tig00000858_pilon:755122..757400- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra2978.t1 ID=Ggra2978.t1|Name=Ggra2978.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2279bp|location=Sequence derived from alignment at tig00000858_pilon:755122..757400- (Gracilaria gracilis GNS1m male) ATGGACGCCTCGCTCGCCGCGCTGGTGCGCACGAGCGCCACCAAGATCTG
CGGCCAGTCCAAGTCCAGCTGCCTGCTGCAAAACGTCAACAACTGCACAA
ACATAGATGGCGTCGACCTGTGCAGCAAGAACTTCACCATCATCATCTTC
CCCTTCTTCGCGCTCTTCATCGGCGTCATCAGCATGCCGCTGTCCAAGTC
CGTCCACGTGTCGTACACCCTCTTCATCCTCATCGTCGGCATCATCCTCG
GCGCCTTGGGCTGCGGCGTTGACATTGGCTTGCTTTCCGTGTCGCTGCGC
CAATGGGTCCATCTGCGCCCGCCCACCATCTTCTTCTACGTCTTCCTGGC
GCCCCTCATCTTTGAGGCCTCGTTCAACACCCGCTGGCACGTCTTCAAGA
AGCTGCTCGTCCCCATCCTCACCGCCGCCTTCATCATAGTCAGTCTGCAG
GTAGCGCTCATCAGCTTCTTCCAAAAGGTTGTCATCCGCACCGAAGGCTG
GTCCTGGTGGTCCGCCCTCATGTTCGGCTCCATGCTGTCCGCCACCGACC
CCATCAGTGTCACCGCCACCCTCAAGTCGCTCGGCGCCTCCGAGGCGCTC
AACACCCTCATCGAGGGCGAGTCGCTCGTCAACGACGGCTCCGCCTTCGT
GCTGTGGGAGCAGTTTTTCGAAAACGCCCAGATCGACTTTAAGCTCGGCG
AGACGGCCGCCGAGGCCGCCGAGGCCGTCGCGCGCTCCAGTGTGGAGGAG
ACCACCAAGTCGGCGGGCGAGATTGTGGGCGCCATCTTCAAGCTCAGCAT
TGGCGGCATGGTTATGGGCGTCGCCTTTGGCCTCGTCGCCCTCATCATTC
TCAGCTCCGTCTATGACGAGTTTGAGGTCGAGACCTCGCTCACCGTCATT
GTCGCCTTTCTGGGCTTTTGGACCGCGCAGGCCCCTTCCAAACTGTCGGG
CGTTATCGCCAACGTTGCCTCGGGCTTGGTCATATCTGCGTTTGGGCGCC
ACCTCATCACGCCTGCTGTTCGAGGGCCGCTTGCAGAGTTTTGGGAGCTA
CTGGGCTGGATTGCCAACACCATTGTGTTTGTGCATGCGGGCGTGCTGCT
CACTGCTTTCACATGGTCGTGTGCGGGCAAGCCGCATGAGGTCAAGGACT
ATGCGTTTATCCTTGTGTGGTACTTGTATCTGCAGCTCATTCGTATGGGC
CTGTTCCTGCTCTTCCGCCCCATCCTGTCGTGGCGCAACAAGTGGCTGGG
CTGGAAGGAAGCGTTGGTGGTGGGCTTTAGCGGCCTTCGAGGCGCCGTGT
CACTCATCCTCGCGCTGGAGGTGGCCGGCAGTCAGGAGCTTCCTGAGGGA
GTCAAGTCGCGCGTCGTGCTGTGGACCACCGGTATTGTGGGGCTCAGCTT
GCTCGTCAATGGCTTTTTGATCAAACCGGTGATTCACGGAATGAAGCTTG
ACCGTGCCGAAAAGTCGAGGGAAGAGTTTATGCTTCGCGCGCGTGCTGTC
ATGGTGCAGCGCACGCTGCAGATTTTGGATAACCTCTGTGTGGAATCGGG
CTACAAGTCGGCGAGATGGTCGTATGTCATCAAGAGTGTGCTGCCGGCTG
AATGGTTGGACGAAGCCGAACATGTCGCTGGCTATCGAAACGCTGTGGAG
CAGCTGTTGGATAATGCGCCCGCTTCCACCAGGGTGAGTCTGGATGCTGT
TCGTGTGGAAGAACGCCAAAAGATAATGCATACACACCTCAACCACCGTC
TGAGTCAGGACATTCCCACGCTTGGCATTCGCCCGTCGCCTACGCTGTCG
CCTGGAGCCAACCAGCAGGACTTCCATCCGAGTATCCGCACATCCATGAG
CAACATGCCTTTCATGTTTAACAATGCGGCCGTCGTGGACACTCCTCACC
GAAGCCCGACGGTTCCGGCCAACCTGGCGGACTTGAACCCTTCCTTCTCT
CCCATCTCAATTGGCGTCGCTGCCAGACCGTCGCGCTTCAGCATGGAGGG
CGGCGCTGGATTGCAGCATCGTCGCTCCATTGATGCCGATGTGGTGCGGT
ACGCCACCACCAGACTCTCCATCGGTCAACCTCACGTTCAAGAACCGCAG
ACCGCTGCGAGCATTCAAAAGGAGATTGCGCAACGCTATCGCGATTTGGG
TGATCATCTGGATGAGTTTGAGGAGACGGAGAAGGATAGGGAAGTTCGTC
GCCGTTTGTTGACCGCAATTTTGTCCCATGTGCGTGCGATCAACAATGCC
AGTTTGGTAGAGTACAGTGTGCTCATTAA back to topCoding sequence (CDS) from alignment at tig00000858_pilon:755122..757400- >Ggra2978.t1 ID=Ggra2978.t1|Name=Ggra2978.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2220bp|location=Sequence derived from alignment at tig00000858_pilon:755122..757400- (Gracilaria gracilis GNS1m male) ATGGACGCCTCGCTCGCCGCGCTGGTGCGCACGAGCGCCACCAAGATCTG CGGCCAGTCCAAGTCCAGCTGCCTGCTGCAAAACGTCAACAACTGCACAA ACATAGATGGCGTCGACCTGTGCAGCAAGAACTTCACCATCATCATCTTC CCCTTCTTCGCGCTCTTCATCGGCGTCATCAGCATGCCGCTGTCCAAGTC CGTCCACGTGTCGTACACCCTCTTCATCCTCATCGTCGGCATCATCCTCG GCGCCTTGGGCTGCGGCGTTGACATTGGCTTGCTTTCCGTGTCGCTGCGC CAATGGGTCCATCTGCGCCCGCCCACCATCTTCTTCTACGTCTTCCTGGC GCCCCTCATCTTTGAGGCCTCGTTCAACACCCGCTGGCACGTCTTCAAGA AGCTGCTCGTCCCCATCCTCACCGCCGCCTTCATCATAGTCAGTCTGCAG GTAGCGCTCATCAGCTTCTTCCAAAAGGTTGTCATCCGCACCGAAGGCTG GTCCTGGTGGTCCGCCCTCATGTTCGGCTCCATGCTGTCCGCCACCGACC CCATCAGTGTCACCGCCACCCTCAAGTCGCTCGGCGCCTCCGAGGCGCTC AACACCCTCATCGAGGGCGAGTCGCTCGTCAACGACGGCTCCGCCTTCGT GCTGTGGGAGCAGTTTTTCGAAAACGCCCAGATCGACTTTAAGCTCGGCG AGACGGCCGCCGAGGCCGCCGAGGCCGTCGCGCGCTCCAGTGTGGAGGAG ACCACCAAGTCGGCGGGCGAGATTGTGGGCGCCATCTTCAAGCTCAGCAT TGGCGGCATGGTTATGGGCGTCGCCTTTGGCCTCGTCGCCCTCATCATTC TCAGCTCCGTCTATGACGAGTTTGAGGTCGAGACCTCGCTCACCGTCATT GTCGCCTTTCTGGGCTTTTGGACCGCGCAGGCCCCTTCCAAACTGTCGGG CGTTATCGCCAACGTTGCCTCGGGCTTGGTCATATCTGCGTTTGGGCGCC ACCTCATCACGCCTGCTGTTCGAGGGCCGCTTGCAGAGTTTTGGGAGCTA CTGGGCTGGATTGCCAACACCATTGTGTTTGTGCATGCGGGCGTGCTGCT CACTGCTTTCACATGGTCGTGTGCGGGCAAGCCGCATGAGGTCAAGGACT ATGCGTTTATCCTTGTGTGGTACTTGTATCTGCAGCTCATTCGTATGGGC CTGTTCCTGCTCTTCCGCCCCATCCTGTCGTGGCGCAACAAGTGGCTGGG CTGGAAGGAAGCGTTGGTGGTGGGCTTTAGCGGCCTTCGAGGCGCCGTGT CACTCATCCTCGCGCTGGAGGTGGCCGGCAGTCAGGAGCTTCCTGAGGGA GTCAAGTCGCGCGTCGTGCTGTGGACCACCGGTATTGTGGGGCTCAGCTT GCTCGTCAATGGCTTTTTGATCAAACCGGTGATTCACGGAATGAAGCTTG ACCGTGCCGAAAAGTCGAGGGAAGAGTTTATGCTTCGCGCGCGTGCTGTC ATGGTGCAGCGCACGCTGCAGATTTTGGATAACCTCTGTGTGGAATCGGG CTACAAGTCGGCGAGATGGTCGTATGTCATCAAGAGTGTGCTGCCGGCTG AATGGTTGGACGAAGCCGAACATGTCGCTGGCTATCGAAACGCTGTGGAG CAGCTGTTGGATAATGCGCCCGCTTCCACCAGGGTGAGTCTGGATGCTGT TCGTGTGGAAGAACGCCAAAAGATAATGCATACACACCTCAACCACCGTC TGAGTCAGGACATTCCCACGCTTGGCATTCGCCCGTCGCCTACGCTGTCG CCTGGAGCCAACCAGCAGGACTTCCATCCGAGTATCCGCACATCCATGAG CAACATGCCTTTCATGTTTAACAATGCGGCCGTCGTGGACACTCCTCACC GAAGCCCGACGGTTCCGGCCAACCTGGCGGACTTGAACCCTTCCTTCTCT CCCATCTCAATTGGCGTCGCTGCCAGACCGTCGCGCTTCAGCATGGAGGG CGGCGCTGGATTGCAGCATCGTCGCTCCATTGATGCCGATGTGGTGCGGT ACGCCACCACCAGACTCTCCATCGGTCAACCTCACGTTCAAGAACCGCAG ACCGCTGCGAGCATTCAAAAGGAGATTGCGCAACGCTATCGCGATTTGGG TGATCATCTGGATGAGTTTGAGGAGACGGAGAAGGATAGGGAATTTGGTA GAGTACAGTGTGCTCATTAA back to top
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