Ggra2804.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2804.t1
Unique NameGgra2804.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length236
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000123_piloncontigtig00000123_pilon:294784..295491 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2804Ggra2804Gracilaria gracilis GNS1m malegenetig00000123_pilon 294784..295491 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2804.t1.start1Ggra2804.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000123_pilon 294784..294786 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2804.t1.CDS1Ggra2804.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000123_pilon 294784..295491 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2804.t1.exon1Ggra2804.t1.exon1Gracilaria gracilis GNS1m maleexontig00000123_pilon 294784..295491 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2804.t1.stop1Ggra2804.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000123_pilon 295489..295491 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2804.t1Ggra2804.t1Gracilaria gracilis GNS1m malepolypeptidetig00000123_pilon 294784..295491 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2804.t1 ID=Ggra2804.t1|Name=Ggra2804.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=236bp
MKNVLALSVFLVVGNAALIPSFRQAGSGGRGGTGTAIGSSNRGGIGGNGG
NGGIGLFGGGDGGDGGNGVVSGDFAIGGFGGQGGDGGDALVVGDGGEGGM
GGGGALYGNFGYGGFGGQGGKGGNGGFFGGDGGDGGDGGVGLLKGLLGFG
GFGGDGGEGGGSFLGGGGRGGRGGLGALYGDFGYGAFGGKGGKGGDGFIA
GDGGDGGNAILAGNFGSGASGGNGGAGGAQLPPVL*
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spliced messenger RNA

>Ggra2804.t1 ID=Ggra2804.t1|Name=Ggra2804.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=708bp|location=Sequence derived from alignment at tig00000123_pilon:294784..295491+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGAACGTTTTGGCTCTTTCGGTATTCCTCGTCGTGGGCAATGCGGC
TCTTATTCCATCATTTCGGCAAGCTGGTAGCGGCGGCAGGGGTGGTACAG
GCACTGCCATTGGTTCATCAAACCGCGGTGGTATAGGTGGCAACGGAGGA
AATGGGGGCATTGGCCTTTTTGGTGGCGGCGACGGAGGGGATGGAGGTAA
TGGTGTTGTTAGCGGTGATTTTGCAATTGGTGGCTTTGGAGGCCAGGGTG
GAGACGGTGGAGACGCTCTCGTTGTCGGGGATGGTGGGGAAGGTGGTATG
GGCGGTGGAGGTGCTCTGTATGGCAACTTCGGATACGGTGGATTTGGAGG
ACAAGGAGGGAAGGGAGGAAATGGTGGCTTCTTCGGTGGGGATGGTGGAG
ACGGTGGGGACGGTGGCGTAGGCTTGCTTAAGGGGTTGCTCGGATTTGGT
GGATTTGGTGGCGATGGTGGAGAGGGAGGTGGGTCTTTCCTGGGCGGCGG
AGGCCGTGGAGGACGTGGTGGGCTTGGAGCGCTATACGGGGACTTTGGAT
ATGGTGCCTTCGGAGGAAAAGGTGGCAAGGGAGGTGACGGTTTCATAGCT
GGTGATGGGGGGGATGGTGGCAACGCGATCCTGGCCGGGAACTTTGGCAG
CGGCGCTTCCGGTGGAAATGGAGGTGCTGGTGGGGCCCAGCTCCCACCTG
TTCTATAG
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protein sequence of Ggra2804.t1

>Ggra2804.t1 ID=Ggra2804.t1|Name=Ggra2804.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=236bp
MKNVLALSVFLVVGNAALIPSFRQAGSGGRGGTGTAIGSSNRGGIGGNGG
NGGIGLFGGGDGGDGGNGVVSGDFAIGGFGGQGGDGGDALVVGDGGEGGM
GGGGALYGNFGYGGFGGQGGKGGNGGFFGGDGGDGGDGGVGLLKGLLGFG
GFGGDGGEGGGSFLGGGGRGGRGGLGALYGDFGYGAFGGKGGKGGDGFIA
GDGGDGGNAILAGNFGSGASGGNGGAGGAQLPPVL*
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mRNA from alignment at tig00000123_pilon:294784..295491+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2804.t1 ID=Ggra2804.t1|Name=Ggra2804.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=708bp|location=Sequence derived from alignment at tig00000123_pilon:294784..295491+ (Gracilaria gracilis GNS1m male)
ATGAAGAACGTTTTGGCTCTTTCGGTATTCCTCGTCGTGGGCAATGCGGC
TCTTATTCCATCATTTCGGCAAGCTGGTAGCGGCGGCAGGGGTGGTACAG
GCACTGCCATTGGTTCATCAAACCGCGGTGGTATAGGTGGCAACGGAGGA
AATGGGGGCATTGGCCTTTTTGGTGGCGGCGACGGAGGGGATGGAGGTAA
TGGTGTTGTTAGCGGTGATTTTGCAATTGGTGGCTTTGGAGGCCAGGGTG
GAGACGGTGGAGACGCTCTCGTTGTCGGGGATGGTGGGGAAGGTGGTATG
GGCGGTGGAGGTGCTCTGTATGGCAACTTCGGATACGGTGGATTTGGAGG
ACAAGGAGGGAAGGGAGGAAATGGTGGCTTCTTCGGTGGGGATGGTGGAG
ACGGTGGGGACGGTGGCGTAGGCTTGCTTAAGGGGTTGCTCGGATTTGGT
GGATTTGGTGGCGATGGTGGAGAGGGAGGTGGGTCTTTCCTGGGCGGCGG
AGGCCGTGGAGGACGTGGTGGGCTTGGAGCGCTATACGGGGACTTTGGAT
ATGGTGCCTTCGGAGGAAAAGGTGGCAAGGGAGGTGACGGTTTCATAGCT
GGTGATGGGGGGGATGGTGGCAACGCGATCCTGGCCGGGAACTTTGGCAG
CGGCGCTTCCGGTGGAAATGGAGGTGCTGGTGGGGCCCAGCTCCCACCTG
TTCTATAG
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Coding sequence (CDS) from alignment at tig00000123_pilon:294784..295491+

>Ggra2804.t1 ID=Ggra2804.t1|Name=Ggra2804.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=708bp|location=Sequence derived from alignment at tig00000123_pilon:294784..295491+ (Gracilaria gracilis GNS1m male)
ATGAAGAACGTTTTGGCTCTTTCGGTATTCCTCGTCGTGGGCAATGCGGC
TCTTATTCCATCATTTCGGCAAGCTGGTAGCGGCGGCAGGGGTGGTACAG
GCACTGCCATTGGTTCATCAAACCGCGGTGGTATAGGTGGCAACGGAGGA
AATGGGGGCATTGGCCTTTTTGGTGGCGGCGACGGAGGGGATGGAGGTAA
TGGTGTTGTTAGCGGTGATTTTGCAATTGGTGGCTTTGGAGGCCAGGGTG
GAGACGGTGGAGACGCTCTCGTTGTCGGGGATGGTGGGGAAGGTGGTATG
GGCGGTGGAGGTGCTCTGTATGGCAACTTCGGATACGGTGGATTTGGAGG
ACAAGGAGGGAAGGGAGGAAATGGTGGCTTCTTCGGTGGGGATGGTGGAG
ACGGTGGGGACGGTGGCGTAGGCTTGCTTAAGGGGTTGCTCGGATTTGGT
GGATTTGGTGGCGATGGTGGAGAGGGAGGTGGGTCTTTCCTGGGCGGCGG
AGGCCGTGGAGGACGTGGTGGGCTTGGAGCGCTATACGGGGACTTTGGAT
ATGGTGCCTTCGGAGGAAAAGGTGGCAAGGGAGGTGACGGTTTCATAGCT
GGTGATGGGGGGGATGGTGGCAACGCGATCCTGGCCGGGAACTTTGGCAG
CGGCGCTTCCGGTGGAAATGGAGGTGCTGGTGGGGCCCAGCTCCCACCTG
TTCTATAG
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