Ggra2456.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2456.t1
Unique NameGgra2456.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length437
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:380492..381802 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog192875.XP_004349251.1
Preferred nameIPPK
PFAMsIns_P5_2-kin
Max annot lvl33154|Opisthokonta
KEGG rclassRC00002,RC00078
KEGG koko:K10572
KEGG ReactionR05202
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
KEGG ModuleM00132
GOsGO:0003341,GO:0003351,GO:0003674,GO:0003824,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0005975,GO:0006020,GO:0006066,GO:0006355,GO:0006356,GO:0006793,GO:0006796,GO:0006810,GO:0006928,GO:0007017,GO:0007018,GO:0007275,GO:0007368,GO:0007389,GO:0008150,GO:0008152,GO:0009058,GO:0009799,GO:0009855,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0015630,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019222,GO:0019637,GO:0019751,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032400,GO:0032401,GO:0032402,GO:0032501,GO:0032502,GO:0032947,GO:0032958,GO:0033059,GO:0035299,GO:0036064,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043473,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0045893,GO:0045935,GO:0045943,GO:0046165,GO:0046173,GO:0046835,GO:0046907,GO:0048518,GO:0048522,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051875,GO:0051904,GO:0051905,GO:0052746,GO:0060255,GO:0060287,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090407,GO:0120025,GO:0120038,GO:1901576,GO:1901615,GO:1901617,GO:1901836,GO:1901838,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Evalue1.66e-07
EggNOG OGsKOG4749@1|root,KOG4749@2759|Eukaryota,3901E@33154|Opisthokonta
EC2.7.1.158
DescriptionPhosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate)
COG categoryT
BRITEko00000,ko00001,ko00002,ko01000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2456Ggra2456Gracilaria gracilis GNS1m malegenetig00000005_pilon 380492..381802 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2456.t1.stop1Ggra2456.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000005_pilon 380492..380494 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2456.t1.CDS1Ggra2456.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000005_pilon 380492..381802 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2456.t1.exon1Ggra2456.t1.exon1Gracilaria gracilis GNS1m maleexontig00000005_pilon 380492..381802 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2456.t1.start1Ggra2456.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000005_pilon 381800..381802 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2456.t1Ggra2456.t1Gracilaria gracilis GNS1m malepolypeptidetig00000005_pilon 380492..381802 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2456.t1 ID=Ggra2456.t1|Name=Ggra2456.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=437bp
MSCFRPVVSKDRQPPGPRSRNFPIPLPILPPPNRWNYRIEGAQKLIFSNA
PADVPQVLVIYAVKNHPCAPLQTVTTVPQALFRRHLSRYLLPHQSVTLTP
AYIKQLSQRATPLRPAHRRTASHISPHNRSASLYPDVAFHFGPNTTLVEI
KPKAALLSRSRLIPPNIASTLEKYTRPPYHIKNYLLQHGALPHRPYSPSH
LLSDDIPTVSSAISSLLTESSRSLRVFRSGEPCDPAHHLHELRAAAHAIV
LDNACAQGIMAIQSADLIDNIGAETIMRNLIRRVGEQQATKMVRRALYAA
QSVTHYDEITYKTSDQAHQLHNTAEYTKALKAAQGLPVAASVQLLAGFLQ
AAAAKDCSMMIALCKLDEAQHRRAESMRVDVHGVKWLAHLWVIDTDEKHI
AKILGKWGVDDRKRASMLGSIVSSCSGASQQQGNAT*
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spliced messenger RNA

>Ggra2456.t1 ID=Ggra2456.t1|Name=Ggra2456.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1311bp|location=Sequence derived from alignment at tig00000005_pilon:380492..381802- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCTGCTTCCGCCCAGTGGTCAGCAAAGACCGCCAGCCGCCGGGTCC
CCGCAGTCGCAACTTCCCAATTCCCCTCCCAATCCTGCCGCCGCCGAATC
GCTGGAACTACCGCATCGAAGGAGCGCAGAAGCTTATCTTTTCCAACGCG
CCCGCCGATGTCCCCCAGGTGCTCGTCATCTACGCCGTCAAGAACCATCC
CTGCGCCCCTCTTCAGACTGTCACAACCGTCCCACAGGCTCTTTTCCGTC
GTCATCTCTCCCGATATCTTCTCCCGCATCAATCCGTCACACTAACTCCT
GCCTACATCAAACAGCTGTCTCAACGCGCCACTCCTCTGCGTCCGGCTCA
TCGCCGAACCGCTTCTCATATCTCGCCACACAATCGCAGCGCCTCGCTGT
ATCCAGACGTTGCCTTTCACTTTGGTCCCAATACAACTCTGGTAGAAATC
AAGCCAAAGGCTGCTCTTTTATCGCGATCAAGGCTCATACCGCCCAACAT
TGCATCCACGCTTGAAAAGTACACCCGTCCACCATACCATATCAAGAACT
ATCTGCTGCAACACGGAGCTCTGCCACATCGACCTTACAGTCCATCTCAT
CTACTCAGCGATGATATCCCCACTGTTTCCAGTGCAATCTCCAGTCTTCT
AACTGAGAGCTCGCGCAGTCTGCGAGTGTTCCGATCTGGCGAGCCTTGTG
ACCCTGCTCACCATCTTCATGAGTTGCGTGCTGCTGCCCATGCCATTGTG
CTCGACAACGCTTGTGCGCAAGGAATCATGGCCATTCAATCTGCGGATCT
TATTGATAACATTGGCGCCGAAACAATAATGCGAAACCTTATCCGACGGG
TAGGTGAGCAACAGGCCACGAAAATGGTGCGTCGCGCGCTCTACGCTGCT
CAATCGGTCACGCACTATGATGAGATCACTTATAAGACCTCTGATCAAGC
ACATCAACTACACAACACAGCTGAGTATACGAAGGCGTTGAAAGCGGCGC
AAGGATTGCCTGTTGCAGCTTCTGTGCAGTTGCTTGCTGGCTTTTTGCAA
GCTGCTGCTGCTAAAGATTGTTCTATGATGATTGCGTTATGTAAACTTGA
TGAGGCTCAACATCGTAGAGCTGAAAGTATGCGTGTTGACGTACATGGTG
TAAAGTGGCTCGCGCACTTGTGGGTCATTGATACAGATGAGAAGCACATT
GCAAAGATTCTTGGAAAGTGGGGCGTTGATGATCGAAAACGAGCTTCAAT
GCTCGGTAGCATAGTTTCTTCATGCAGCGGTGCAAGCCAACAACAGGGTA
ACGCCACATAA
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protein sequence of Ggra2456.t1

>Ggra2456.t1 ID=Ggra2456.t1|Name=Ggra2456.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=437bp
MSCFRPVVSKDRQPPGPRSRNFPIPLPILPPPNRWNYRIEGAQKLIFSNA
PADVPQVLVIYAVKNHPCAPLQTVTTVPQALFRRHLSRYLLPHQSVTLTP
AYIKQLSQRATPLRPAHRRTASHISPHNRSASLYPDVAFHFGPNTTLVEI
KPKAALLSRSRLIPPNIASTLEKYTRPPYHIKNYLLQHGALPHRPYSPSH
LLSDDIPTVSSAISSLLTESSRSLRVFRSGEPCDPAHHLHELRAAAHAIV
LDNACAQGIMAIQSADLIDNIGAETIMRNLIRRVGEQQATKMVRRALYAA
QSVTHYDEITYKTSDQAHQLHNTAEYTKALKAAQGLPVAASVQLLAGFLQ
AAAAKDCSMMIALCKLDEAQHRRAESMRVDVHGVKWLAHLWVIDTDEKHI
AKILGKWGVDDRKRASMLGSIVSSCSGASQQQGNAT*
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mRNA from alignment at tig00000005_pilon:380492..381802-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2456.t1 ID=Ggra2456.t1|Name=Ggra2456.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1311bp|location=Sequence derived from alignment at tig00000005_pilon:380492..381802- (Gracilaria gracilis GNS1m male)
ATGTCCTGCTTCCGCCCAGTGGTCAGCAAAGACCGCCAGCCGCCGGGTCC
CCGCAGTCGCAACTTCCCAATTCCCCTCCCAATCCTGCCGCCGCCGAATC
GCTGGAACTACCGCATCGAAGGAGCGCAGAAGCTTATCTTTTCCAACGCG
CCCGCCGATGTCCCCCAGGTGCTCGTCATCTACGCCGTCAAGAACCATCC
CTGCGCCCCTCTTCAGACTGTCACAACCGTCCCACAGGCTCTTTTCCGTC
GTCATCTCTCCCGATATCTTCTCCCGCATCAATCCGTCACACTAACTCCT
GCCTACATCAAACAGCTGTCTCAACGCGCCACTCCTCTGCGTCCGGCTCA
TCGCCGAACCGCTTCTCATATCTCGCCACACAATCGCAGCGCCTCGCTGT
ATCCAGACGTTGCCTTTCACTTTGGTCCCAATACAACTCTGGTAGAAATC
AAGCCAAAGGCTGCTCTTTTATCGCGATCAAGGCTCATACCGCCCAACAT
TGCATCCACGCTTGAAAAGTACACCCGTCCACCATACCATATCAAGAACT
ATCTGCTGCAACACGGAGCTCTGCCACATCGACCTTACAGTCCATCTCAT
CTACTCAGCGATGATATCCCCACTGTTTCCAGTGCAATCTCCAGTCTTCT
AACTGAGAGCTCGCGCAGTCTGCGAGTGTTCCGATCTGGCGAGCCTTGTG
ACCCTGCTCACCATCTTCATGAGTTGCGTGCTGCTGCCCATGCCATTGTG
CTCGACAACGCTTGTGCGCAAGGAATCATGGCCATTCAATCTGCGGATCT
TATTGATAACATTGGCGCCGAAACAATAATGCGAAACCTTATCCGACGGG
TAGGTGAGCAACAGGCCACGAAAATGGTGCGTCGCGCGCTCTACGCTGCT
CAATCGGTCACGCACTATGATGAGATCACTTATAAGACCTCTGATCAAGC
ACATCAACTACACAACACAGCTGAGTATACGAAGGCGTTGAAAGCGGCGC
AAGGATTGCCTGTTGCAGCTTCTGTGCAGTTGCTTGCTGGCTTTTTGCAA
GCTGCTGCTGCTAAAGATTGTTCTATGATGATTGCGTTATGTAAACTTGA
TGAGGCTCAACATCGTAGAGCTGAAAGTATGCGTGTTGACGTACATGGTG
TAAAGTGGCTCGCGCACTTGTGGGTCATTGATACAGATGAGAAGCACATT
GCAAAGATTCTTGGAAAGTGGGGCGTTGATGATCGAAAACGAGCTTCAAT
GCTCGGTAGCATAGTTTCTTCATGCAGCGGTGCAAGCCAACAACAGGGTA
ACGCCACATAA
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Coding sequence (CDS) from alignment at tig00000005_pilon:380492..381802-

>Ggra2456.t1 ID=Ggra2456.t1|Name=Ggra2456.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1311bp|location=Sequence derived from alignment at tig00000005_pilon:380492..381802- (Gracilaria gracilis GNS1m male)
ATGTCCTGCTTCCGCCCAGTGGTCAGCAAAGACCGCCAGCCGCCGGGTCC
CCGCAGTCGCAACTTCCCAATTCCCCTCCCAATCCTGCCGCCGCCGAATC
GCTGGAACTACCGCATCGAAGGAGCGCAGAAGCTTATCTTTTCCAACGCG
CCCGCCGATGTCCCCCAGGTGCTCGTCATCTACGCCGTCAAGAACCATCC
CTGCGCCCCTCTTCAGACTGTCACAACCGTCCCACAGGCTCTTTTCCGTC
GTCATCTCTCCCGATATCTTCTCCCGCATCAATCCGTCACACTAACTCCT
GCCTACATCAAACAGCTGTCTCAACGCGCCACTCCTCTGCGTCCGGCTCA
TCGCCGAACCGCTTCTCATATCTCGCCACACAATCGCAGCGCCTCGCTGT
ATCCAGACGTTGCCTTTCACTTTGGTCCCAATACAACTCTGGTAGAAATC
AAGCCAAAGGCTGCTCTTTTATCGCGATCAAGGCTCATACCGCCCAACAT
TGCATCCACGCTTGAAAAGTACACCCGTCCACCATACCATATCAAGAACT
ATCTGCTGCAACACGGAGCTCTGCCACATCGACCTTACAGTCCATCTCAT
CTACTCAGCGATGATATCCCCACTGTTTCCAGTGCAATCTCCAGTCTTCT
AACTGAGAGCTCGCGCAGTCTGCGAGTGTTCCGATCTGGCGAGCCTTGTG
ACCCTGCTCACCATCTTCATGAGTTGCGTGCTGCTGCCCATGCCATTGTG
CTCGACAACGCTTGTGCGCAAGGAATCATGGCCATTCAATCTGCGGATCT
TATTGATAACATTGGCGCCGAAACAATAATGCGAAACCTTATCCGACGGG
TAGGTGAGCAACAGGCCACGAAAATGGTGCGTCGCGCGCTCTACGCTGCT
CAATCGGTCACGCACTATGATGAGATCACTTATAAGACCTCTGATCAAGC
ACATCAACTACACAACACAGCTGAGTATACGAAGGCGTTGAAAGCGGCGC
AAGGATTGCCTGTTGCAGCTTCTGTGCAGTTGCTTGCTGGCTTTTTGCAA
GCTGCTGCTGCTAAAGATTGTTCTATGATGATTGCGTTATGTAAACTTGA
TGAGGCTCAACATCGTAGAGCTGAAAGTATGCGTGTTGACGTACATGGTG
TAAAGTGGCTCGCGCACTTGTGGGTCATTGATACAGATGAGAAGCACATT
GCAAAGATTCTTGGAAAGTGGGGCGTTGATGATCGAAAACGAGCTTCAAT
GCTCGGTAGCATAGTTTCTTCATGCAGCGGTGCAAGCCAACAACAGGGTA
ACGCCACATAA
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