Ggra2429.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2429.t1
Unique NameGgra2429.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length152
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:256497..256952 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2429Ggra2429Gracilaria gracilis GNS1m malegenetig00000005_pilon 256497..256952 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2429.t1.stop1Ggra2429.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000005_pilon 256497..256499 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2429.t1.CDS1Ggra2429.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000005_pilon 256497..256952 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2429.t1.exon1Ggra2429.t1.exon1Gracilaria gracilis GNS1m maleexontig00000005_pilon 256497..256952 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2429.t1.start1Ggra2429.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000005_pilon 256950..256952 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2429.t1Ggra2429.t1Gracilaria gracilis GNS1m malepolypeptidetig00000005_pilon 256497..256952 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2429.t1 ID=Ggra2429.t1|Name=Ggra2429.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=152bp
MGDFIGSYVTIDDEEILSRQFALLRAELPVSIMEMDQLQAETGRMRRLEA
VDALETQAYPQPAAVAFDLDEVDLDEIGVEPMSLFAPKSGDNEGEDKLFS
VDLNSTKKAFERKEAKTEEKPSETTQRKKNTLKTSIIKFLWRKKNEEKVN
K*
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spliced messenger RNA

>Ggra2429.t1 ID=Ggra2429.t1|Name=Ggra2429.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=456bp|location=Sequence derived from alignment at tig00000005_pilon:256497..256952- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTGATTTCATTGGTTCTTACGTTACAATCGATGATGAAGAAATTCT
TTCTCGTCAGTTTGCGTTACTGCGTGCAGAACTACCAGTATCAATCATGG
AAATGGATCAGTTGCAAGCCGAGACTGGTAGAATGCGTCGCTTGGAAGCA
GTGGATGCCTTAGAAACACAGGCATATCCTCAACCCGCTGCCGTCGCATT
TGATTTAGATGAGGTGGATCTGGACGAAATTGGGGTGGAGCCAATGAGTT
TGTTTGCCCCCAAGTCTGGGGACAATGAAGGAGAGGATAAACTATTCAGT
GTCGATCTCAATTCTACGAAGAAGGCATTTGAACGAAAGGAAGCGAAAAC
TGAAGAGAAACCATCTGAAACCACCCAGCGAAAGAAAAACACGCTGAAGA
CTTCCATAATCAAGTTCTTATGGCGAAAAAAGAACGAAGAAAAGGTTAAC
AAATAA
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protein sequence of Ggra2429.t1

>Ggra2429.t1 ID=Ggra2429.t1|Name=Ggra2429.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=152bp
MGDFIGSYVTIDDEEILSRQFALLRAELPVSIMEMDQLQAETGRMRRLEA
VDALETQAYPQPAAVAFDLDEVDLDEIGVEPMSLFAPKSGDNEGEDKLFS
VDLNSTKKAFERKEAKTEEKPSETTQRKKNTLKTSIIKFLWRKKNEEKVN
K*
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mRNA from alignment at tig00000005_pilon:256497..256952-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2429.t1 ID=Ggra2429.t1|Name=Ggra2429.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=456bp|location=Sequence derived from alignment at tig00000005_pilon:256497..256952- (Gracilaria gracilis GNS1m male)
ATGGGTGATTTCATTGGTTCTTACGTTACAATCGATGATGAAGAAATTCT
TTCTCGTCAGTTTGCGTTACTGCGTGCAGAACTACCAGTATCAATCATGG
AAATGGATCAGTTGCAAGCCGAGACTGGTAGAATGCGTCGCTTGGAAGCA
GTGGATGCCTTAGAAACACAGGCATATCCTCAACCCGCTGCCGTCGCATT
TGATTTAGATGAGGTGGATCTGGACGAAATTGGGGTGGAGCCAATGAGTT
TGTTTGCCCCCAAGTCTGGGGACAATGAAGGAGAGGATAAACTATTCAGT
GTCGATCTCAATTCTACGAAGAAGGCATTTGAACGAAAGGAAGCGAAAAC
TGAAGAGAAACCATCTGAAACCACCCAGCGAAAGAAAAACACGCTGAAGA
CTTCCATAATCAAGTTCTTATGGCGAAAAAAGAACGAAGAAAAGGTTAAC
AAATAA
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Coding sequence (CDS) from alignment at tig00000005_pilon:256497..256952-

>Ggra2429.t1 ID=Ggra2429.t1|Name=Ggra2429.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=456bp|location=Sequence derived from alignment at tig00000005_pilon:256497..256952- (Gracilaria gracilis GNS1m male)
ATGGGTGATTTCATTGGTTCTTACGTTACAATCGATGATGAAGAAATTCT
TTCTCGTCAGTTTGCGTTACTGCGTGCAGAACTACCAGTATCAATCATGG
AAATGGATCAGTTGCAAGCCGAGACTGGTAGAATGCGTCGCTTGGAAGCA
GTGGATGCCTTAGAAACACAGGCATATCCTCAACCCGCTGCCGTCGCATT
TGATTTAGATGAGGTGGATCTGGACGAAATTGGGGTGGAGCCAATGAGTT
TGTTTGCCCCCAAGTCTGGGGACAATGAAGGAGAGGATAAACTATTCAGT
GTCGATCTCAATTCTACGAAGAAGGCATTTGAACGAAAGGAAGCGAAAAC
TGAAGAGAAACCATCTGAAACCACCCAGCGAAAGAAAAACACGCTGAAGA
CTTCCATAATCAAGTTCTTATGGCGAAAAAAGAACGAAGAAAAGGTTAAC
AAATAA
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