Ggra2365.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2365.t1
Unique NameGgra2365.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length505
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:41152..42666 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005703355.1
Preferred namePFKFB2
PFAMs6PF2K,His_Phos_1
Max annot lvl2759|Eukaryota
KEGG rclassRC00152
KEGG koko:K01103,ko:K19028,ko:K19029,ko:K19030
KEGG ReactionR02731
KEGG Pathwayko00051,ko04066,ko04152,ko04919,ko04922,map00051,map04066,map04152,map04919,map04922
GOsGO:0000166,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0003873,GO:0004331,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006000,GO:0006003,GO:0006006,GO:0006007,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006110,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008144,GO:0008150,GO:0008152,GO:0008443,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009605,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010562,GO:0010563,GO:0010646,GO:0010647,GO:0010675,GO:0010676,GO:0010677,GO:0010817,GO:0010906,GO:0014070,GO:0014074,GO:0016051,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019203,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0023051,GO:0023056,GO:0030554,GO:0030808,GO:0030809,GO:0030810,GO:0030811,GO:0030812,GO:0030813,GO:0031099,GO:0031100,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031330,GO:0031331,GO:0031667,GO:0031960,GO:0031974,GO:0031981,GO:0032024,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032868,GO:0032879,GO:0032880,GO:0032991,GO:0033131,GO:0033133,GO:0033674,GO:0033762,GO:0033993,GO:0034284,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042578,GO:0042594,GO:0042802,GO:0042866,GO:0043085,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043434,GO:0043436,GO:0043467,GO:0043470,GO:0043540,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045820,GO:0045821,GO:0045912,GO:0045913,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045980,GO:0045981,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046683,GO:0046700,GO:0046835,GO:0046883,GO:0046887,GO:0046939,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048731,GO:0048856,GO:0050308,GO:0050708,GO:0050714,GO:0050789,GO:0050790,GO:0050794,GO:0050796,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051194,GO:0051195,GO:0051196,GO:0051197,GO:0051198,GO:0051222,GO:0051223,GO:0051338,GO:0051347,GO:0051384,GO:0051591,GO:0055086,GO:0060322,GO:0061695,GO:0062012,GO:0062013,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070095,GO:0070201,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090276,GO:0090277,GO:0090407,GO:0097159,GO:0097367,GO:1900371,GO:1900372,GO:1900373,GO:1900542,GO:1900543,GO:1900544,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901652,GO:1901698,GO:1901700,GO:1902494,GO:1903299,GO:1903301,GO:1903530,GO:1903532,GO:1903578,GO:1903579,GO:1903580,GO:1904951,GO:1990234,GO:2001169,GO:2001170,GO:2001171
Evalue1.53e-186
EggNOG OGsCOG0406@1|root,KOG0234@2759|Eukaryota
EC2.7.1.105,3.1.3.46
Description6phosphofructo2kinase
COG categoryG
BiGG ReactioniMM904.YJL155C,iND750.YJL155C
BRITEko00000,ko00001,ko01000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2365Ggra2365Gracilaria gracilis GNS1m malegenetig00000005_pilon 41152..42666 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2365.t1.start1Ggra2365.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000005_pilon 41152..41154 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2365.t1.CDS1Ggra2365.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000005_pilon 41152..42666 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2365.t1.exon1Ggra2365.t1.exon1Gracilaria gracilis GNS1m maleexontig00000005_pilon 41152..42666 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2365.t1.stop1Ggra2365.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000005_pilon 42664..42666 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2365.t1Ggra2365.t1Gracilaria gracilis GNS1m malepolypeptidetig00000005_pilon 41152..42666 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2365.t1 ID=Ggra2365.t1|Name=Ggra2365.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=505bp
MTLHEDRLREMLKRAVSFDNVSAFASIPNGAGAHTANLSALTSPLSPSSA
PIATKKLCIVMVGLPARGKTHIARCLERYLNWLGFSAAVFNVGNYRRMIL
GATQSADFFSPDNAEGRRARMELAIECMNDMLAWFSHGGMVGIYDATNST
KKRRKMVKDRLEAVGVRVLFLESLCTDPAIIEKNILETKLHSPDYKHKDP
EEAVMDFKKRIQQYDKANETVDDNENCSYIKIVNVGRQIILNDIQGFAQG
KIVSFLLNSHITPRSIYLSRHGESEWNVTGQIGGDPDLTVLGRKYAKRLA
DFIDNEFPKKGKEFPLVWTSQLRRTRRTVEHIPTMTHSWRALNEIDAGVC
EGMTYESIADQMPQIAGERKKDKLRYRYPGGESYVDVIYRLEPLILELER
QRGPVLIVAHNAVIRAIYAYFMRKSQEECPYIDIPLHTVFKLTTRAYGAE
EEVFPLEVAHTDLNRTPESGDSDDGEEEEAVKQAPDPIKPLTESFELVTV
NGLK*
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spliced messenger RNA

>Ggra2365.t1 ID=Ggra2365.t1|Name=Ggra2365.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1515bp|location=Sequence derived from alignment at tig00000005_pilon:41152..42666+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTCTTCATGAAGACCGCTTACGAGAGATGCTCAAGCGCGCAGTGTC
CTTTGACAACGTGTCTGCTTTTGCTTCCATTCCCAATGGCGCTGGAGCTC
ACACCGCCAACCTCTCCGCACTCACCAGCCCGCTATCGCCGAGCTCTGCC
CCCATTGCCACCAAGAAGCTCTGCATTGTAATGGTCGGCCTCCCTGCGCG
CGGCAAGACCCACATTGCCCGATGCCTTGAGCGTTACCTCAACTGGCTGG
GCTTCTCCGCCGCTGTTTTCAATGTGGGCAACTACCGACGCATGATTCTT
GGCGCCACCCAGTCGGCTGATTTCTTCAGCCCAGACAATGCTGAGGGACG
CCGCGCGCGCATGGAGCTGGCCATCGAATGCATGAATGATATGCTCGCCT
GGTTCAGCCACGGCGGAATGGTTGGCATATACGATGCTACCAATTCCACC
AAGAAGAGGCGTAAGATGGTCAAGGATCGTCTCGAAGCTGTTGGTGTTCG
CGTTCTTTTCCTGGAGAGCCTCTGTACAGATCCCGCTATCATCGAGAAGA
ACATTTTGGAGACCAAGCTTCATTCGCCAGATTACAAACACAAGGACCCT
GAAGAAGCGGTAATGGATTTCAAAAAACGCATCCAGCAGTATGATAAAGC
CAACGAGACTGTGGATGACAACGAGAATTGCTCCTACATCAAAATCGTCA
ACGTCGGTCGGCAAATTATCCTCAATGACATTCAAGGTTTTGCGCAAGGC
AAAATAGTCAGCTTCTTGCTTAATTCACATATCACTCCTAGAAGCATCTA
TCTTAGTCGACACGGCGAATCGGAATGGAATGTCACCGGCCAAATTGGAG
GAGATCCAGACCTCACTGTGCTAGGACGAAAATATGCCAAGCGCCTTGCG
GACTTTATTGACAATGAATTTCCAAAGAAGGGCAAGGAGTTCCCTCTCGT
GTGGACCAGTCAACTGCGTCGCACACGCCGCACGGTTGAACATATCCCCA
CTATGACCCACTCATGGCGCGCATTGAATGAGATTGATGCGGGCGTATGC
GAGGGAATGACGTACGAGTCCATTGCAGACCAAATGCCTCAAATCGCCGG
AGAGAGGAAAAAGGACAAACTGCGGTACAGGTATCCGGGCGGTGAGAGCT
ATGTGGATGTGATATACCGCCTCGAACCTCTCATATTGGAACTCGAACGG
CAAAGGGGACCTGTGTTAATCGTGGCTCACAACGCTGTCATCCGCGCCAT
CTATGCGTATTTCATGAGAAAGTCGCAGGAGGAATGTCCCTACATTGACA
TTCCGTTACATACAGTTTTCAAGCTAACTACACGTGCATATGGTGCGGAG
GAAGAAGTTTTTCCGCTTGAGGTAGCACACACTGACCTCAACCGAACACC
AGAGTCAGGAGATAGTGATGATGGAGAAGAAGAAGAAGCCGTGAAGCAGG
CCCCAGACCCCATCAAGCCTCTGACAGAGTCTTTCGAACTTGTTACCGTC
AATGGATTGAAATGA
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protein sequence of Ggra2365.t1

>Ggra2365.t1 ID=Ggra2365.t1|Name=Ggra2365.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=505bp
MTLHEDRLREMLKRAVSFDNVSAFASIPNGAGAHTANLSALTSPLSPSSA
PIATKKLCIVMVGLPARGKTHIARCLERYLNWLGFSAAVFNVGNYRRMIL
GATQSADFFSPDNAEGRRARMELAIECMNDMLAWFSHGGMVGIYDATNST
KKRRKMVKDRLEAVGVRVLFLESLCTDPAIIEKNILETKLHSPDYKHKDP
EEAVMDFKKRIQQYDKANETVDDNENCSYIKIVNVGRQIILNDIQGFAQG
KIVSFLLNSHITPRSIYLSRHGESEWNVTGQIGGDPDLTVLGRKYAKRLA
DFIDNEFPKKGKEFPLVWTSQLRRTRRTVEHIPTMTHSWRALNEIDAGVC
EGMTYESIADQMPQIAGERKKDKLRYRYPGGESYVDVIYRLEPLILELER
QRGPVLIVAHNAVIRAIYAYFMRKSQEECPYIDIPLHTVFKLTTRAYGAE
EEVFPLEVAHTDLNRTPESGDSDDGEEEEAVKQAPDPIKPLTESFELVTV
NGLK*
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mRNA from alignment at tig00000005_pilon:41152..42666+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2365.t1 ID=Ggra2365.t1|Name=Ggra2365.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1515bp|location=Sequence derived from alignment at tig00000005_pilon:41152..42666+ (Gracilaria gracilis GNS1m male)
ATGACTCTTCATGAAGACCGCTTACGAGAGATGCTCAAGCGCGCAGTGTC
CTTTGACAACGTGTCTGCTTTTGCTTCCATTCCCAATGGCGCTGGAGCTC
ACACCGCCAACCTCTCCGCACTCACCAGCCCGCTATCGCCGAGCTCTGCC
CCCATTGCCACCAAGAAGCTCTGCATTGTAATGGTCGGCCTCCCTGCGCG
CGGCAAGACCCACATTGCCCGATGCCTTGAGCGTTACCTCAACTGGCTGG
GCTTCTCCGCCGCTGTTTTCAATGTGGGCAACTACCGACGCATGATTCTT
GGCGCCACCCAGTCGGCTGATTTCTTCAGCCCAGACAATGCTGAGGGACG
CCGCGCGCGCATGGAGCTGGCCATCGAATGCATGAATGATATGCTCGCCT
GGTTCAGCCACGGCGGAATGGTTGGCATATACGATGCTACCAATTCCACC
AAGAAGAGGCGTAAGATGGTCAAGGATCGTCTCGAAGCTGTTGGTGTTCG
CGTTCTTTTCCTGGAGAGCCTCTGTACAGATCCCGCTATCATCGAGAAGA
ACATTTTGGAGACCAAGCTTCATTCGCCAGATTACAAACACAAGGACCCT
GAAGAAGCGGTAATGGATTTCAAAAAACGCATCCAGCAGTATGATAAAGC
CAACGAGACTGTGGATGACAACGAGAATTGCTCCTACATCAAAATCGTCA
ACGTCGGTCGGCAAATTATCCTCAATGACATTCAAGGTTTTGCGCAAGGC
AAAATAGTCAGCTTCTTGCTTAATTCACATATCACTCCTAGAAGCATCTA
TCTTAGTCGACACGGCGAATCGGAATGGAATGTCACCGGCCAAATTGGAG
GAGATCCAGACCTCACTGTGCTAGGACGAAAATATGCCAAGCGCCTTGCG
GACTTTATTGACAATGAATTTCCAAAGAAGGGCAAGGAGTTCCCTCTCGT
GTGGACCAGTCAACTGCGTCGCACACGCCGCACGGTTGAACATATCCCCA
CTATGACCCACTCATGGCGCGCATTGAATGAGATTGATGCGGGCGTATGC
GAGGGAATGACGTACGAGTCCATTGCAGACCAAATGCCTCAAATCGCCGG
AGAGAGGAAAAAGGACAAACTGCGGTACAGGTATCCGGGCGGTGAGAGCT
ATGTGGATGTGATATACCGCCTCGAACCTCTCATATTGGAACTCGAACGG
CAAAGGGGACCTGTGTTAATCGTGGCTCACAACGCTGTCATCCGCGCCAT
CTATGCGTATTTCATGAGAAAGTCGCAGGAGGAATGTCCCTACATTGACA
TTCCGTTACATACAGTTTTCAAGCTAACTACACGTGCATATGGTGCGGAG
GAAGAAGTTTTTCCGCTTGAGGTAGCACACACTGACCTCAACCGAACACC
AGAGTCAGGAGATAGTGATGATGGAGAAGAAGAAGAAGCCGTGAAGCAGG
CCCCAGACCCCATCAAGCCTCTGACAGAGTCTTTCGAACTTGTTACCGTC
AATGGATTGAAATGA
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Coding sequence (CDS) from alignment at tig00000005_pilon:41152..42666+

>Ggra2365.t1 ID=Ggra2365.t1|Name=Ggra2365.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1515bp|location=Sequence derived from alignment at tig00000005_pilon:41152..42666+ (Gracilaria gracilis GNS1m male)
ATGACTCTTCATGAAGACCGCTTACGAGAGATGCTCAAGCGCGCAGTGTC
CTTTGACAACGTGTCTGCTTTTGCTTCCATTCCCAATGGCGCTGGAGCTC
ACACCGCCAACCTCTCCGCACTCACCAGCCCGCTATCGCCGAGCTCTGCC
CCCATTGCCACCAAGAAGCTCTGCATTGTAATGGTCGGCCTCCCTGCGCG
CGGCAAGACCCACATTGCCCGATGCCTTGAGCGTTACCTCAACTGGCTGG
GCTTCTCCGCCGCTGTTTTCAATGTGGGCAACTACCGACGCATGATTCTT
GGCGCCACCCAGTCGGCTGATTTCTTCAGCCCAGACAATGCTGAGGGACG
CCGCGCGCGCATGGAGCTGGCCATCGAATGCATGAATGATATGCTCGCCT
GGTTCAGCCACGGCGGAATGGTTGGCATATACGATGCTACCAATTCCACC
AAGAAGAGGCGTAAGATGGTCAAGGATCGTCTCGAAGCTGTTGGTGTTCG
CGTTCTTTTCCTGGAGAGCCTCTGTACAGATCCCGCTATCATCGAGAAGA
ACATTTTGGAGACCAAGCTTCATTCGCCAGATTACAAACACAAGGACCCT
GAAGAAGCGGTAATGGATTTCAAAAAACGCATCCAGCAGTATGATAAAGC
CAACGAGACTGTGGATGACAACGAGAATTGCTCCTACATCAAAATCGTCA
ACGTCGGTCGGCAAATTATCCTCAATGACATTCAAGGTTTTGCGCAAGGC
AAAATAGTCAGCTTCTTGCTTAATTCACATATCACTCCTAGAAGCATCTA
TCTTAGTCGACACGGCGAATCGGAATGGAATGTCACCGGCCAAATTGGAG
GAGATCCAGACCTCACTGTGCTAGGACGAAAATATGCCAAGCGCCTTGCG
GACTTTATTGACAATGAATTTCCAAAGAAGGGCAAGGAGTTCCCTCTCGT
GTGGACCAGTCAACTGCGTCGCACACGCCGCACGGTTGAACATATCCCCA
CTATGACCCACTCATGGCGCGCATTGAATGAGATTGATGCGGGCGTATGC
GAGGGAATGACGTACGAGTCCATTGCAGACCAAATGCCTCAAATCGCCGG
AGAGAGGAAAAAGGACAAACTGCGGTACAGGTATCCGGGCGGTGAGAGCT
ATGTGGATGTGATATACCGCCTCGAACCTCTCATATTGGAACTCGAACGG
CAAAGGGGACCTGTGTTAATCGTGGCTCACAACGCTGTCATCCGCGCCAT
CTATGCGTATTTCATGAGAAAGTCGCAGGAGGAATGTCCCTACATTGACA
TTCCGTTACATACAGTTTTCAAGCTAACTACACGTGCATATGGTGCGGAG
GAAGAAGTTTTTCCGCTTGAGGTAGCACACACTGACCTCAACCGAACACC
AGAGTCAGGAGATAGTGATGATGGAGAAGAAGAAGAAGCCGTGAAGCAGG
CCCCAGACCCCATCAAGCCTCTGACAGAGTCTTTCGAACTTGTTACCGTC
AATGGATTGAAATGA
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