Ggra2361.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2361.t1
Unique NameGgra2361.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length390
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:32435..33604 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005704939.1
Preferred nameSLC25A32
PFAMsMito_carr
Max annot lvl2759|Eukaryota
KEGG rclassRC00062,RC00189,RC00676,RC01052
KEGG koko:K00276,ko:K02935,ko:K15115
KEGG TC2.A.29.10.1,2.A.29.10.2,2.A.29.10.3,2.A.29.10.5
KEGG ReactionR02382,R02529,R02613,R03139,R04027,R04300,R06154,R06740
KEGG Pathwayko00260,ko00350,ko00360,ko00410,ko00950,ko00960,ko01100,ko01110,ko03010,map00260,map00350,map00360,map00410,map00950,map00960,map01100,map01110,map03010
KEGG ModuleM00178
GOsGO:0001505,GO:0003674,GO:0005215,GO:0005310,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006082,GO:0006520,GO:0006544,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006839,GO:0006855,GO:0006862,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0008517,GO:0009069,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0009987,GO:0015075,GO:0015215,GO:0015230,GO:0015238,GO:0015318,GO:0015605,GO:0015711,GO:0015748,GO:0015849,GO:0015883,GO:0015884,GO:0015893,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0017144,GO:0019752,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031966,GO:0031967,GO:0031975,GO:0032592,GO:0034220,GO:0034641,GO:0035350,GO:0035461,GO:0042133,GO:0042221,GO:0042493,GO:0042558,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0046483,GO:0046655,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051182,GO:0051184,GO:0051186,GO:0051234,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071704,GO:0071705,GO:0072337,GO:0072349,GO:0090482,GO:0098573,GO:0098656,GO:0098838,GO:1901360,GO:1901564,GO:1901605,GO:1901679,GO:1903825,GO:1904947,GO:1905039,GO:1990542,GO:1990548
Evalue3.09e-72
EggNOG OGsKOG0764@1|root,KOG0764@2759|Eukaryota
EC1.4.3.21
DescriptionBelongs to the mitochondrial carrier (TC 2.A.29) family
COG categoryU
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko02000,ko03011
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2361Ggra2361Gracilaria gracilis GNS1m malegenetig00000005_pilon 32435..33604 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2361.t1.stop1Ggra2361.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000005_pilon 32435..32437 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2361.t1.CDS1Ggra2361.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000005_pilon 32435..33604 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2361.t1.exon1Ggra2361.t1.exon1Gracilaria gracilis GNS1m maleexontig00000005_pilon 32435..33604 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2361.t1.start1Ggra2361.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000005_pilon 33602..33604 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2361.t1Ggra2361.t1Gracilaria gracilis GNS1m malepolypeptidetig00000005_pilon 32435..33604 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2361.t1 ID=Ggra2361.t1|Name=Ggra2361.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=390bp
MEVCRRPYPMPINNGMMLADLGSPGVAIALSTESAYAPPKLTVTRAIPFK
HDASSPIQNLAAQRCSLQPKIPPPSLHPLRNEGSSKSLSGPPVLIYPPYA
HAFAGAGAGLATVLLLHPLDTLRTRLQVSTSGAALRILRNMVLREGSIAL
YKGVVPAAFGSVFSWACYFHWFQQAHSFYRRRVPYDPVSHLLAGSTAGAV
TSFATNPIWVVKVRLQLQAVHSVHRAQVKPYSGFSDGLQSILREEGIRGL
YRGLGPSLWLVSHGAIQFTLYEQFKAWLKARGDLGKRQGAAATTTVYQSL
IASTASKLIASVSTYPIQVARTRMQDRAVDSERYGSLGRAFFHILRTEGV
RGLYRGLSANIARVTPQAAVTFITYEQILGITASQSTGR*
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spliced messenger RNA

>Ggra2361.t1 ID=Ggra2361.t1|Name=Ggra2361.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1170bp|location=Sequence derived from alignment at tig00000005_pilon:32435..33604- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAAGTGTGTCGCCGGCCGTACCCGATGCCAATCAATAATGGCATGAT
GCTGGCTGACTTGGGCAGCCCGGGGGTTGCAATCGCCCTTTCAACGGAGT
CTGCGTACGCCCCACCAAAGCTAACGGTCACGCGTGCCATTCCGTTTAAG
CACGACGCCTCATCGCCGATCCAGAACCTAGCAGCACAACGCTGCTCACT
GCAACCAAAGATTCCACCGCCAAGCTTGCACCCGCTCCGCAATGAAGGCT
CCTCCAAATCGCTAAGCGGGCCTCCAGTTCTGATTTATCCGCCCTATGCG
CATGCATTCGCTGGAGCTGGAGCTGGTTTGGCCACTGTTTTGCTGTTGCA
TCCTTTGGACACATTGCGGACAAGACTGCAAGTATCTACAAGTGGCGCCG
CATTGCGAATCCTTCGGAACATGGTTCTGCGTGAAGGGTCGATAGCTCTT
TACAAGGGTGTGGTGCCTGCTGCCTTTGGAAGCGTTTTTTCCTGGGCGTG
TTACTTTCATTGGTTCCAGCAAGCACATTCATTCTATCGGAGGCGAGTTC
CTTACGACCCTGTATCACATTTGCTCGCCGGAAGCACTGCAGGTGCCGTG
ACATCCTTTGCCACAAATCCGATTTGGGTAGTGAAGGTTCGTTTGCAGCT
GCAGGCCGTGCATTCAGTCCATCGGGCACAAGTAAAACCATACAGTGGTT
TTTCAGATGGGCTCCAATCCATCTTGAGAGAGGAAGGGATACGTGGATTG
TACAGAGGATTGGGGCCAAGTTTGTGGCTTGTTTCGCACGGCGCCATTCA
ATTCACGCTATATGAGCAGTTCAAAGCGTGGCTGAAAGCACGAGGCGACC
TCGGGAAACGACAAGGTGCTGCGGCAACTACCACGGTATATCAATCTCTC
ATTGCTTCCACAGCATCCAAACTAATTGCCTCCGTGAGCACATACCCCAT
TCAAGTTGCAAGAACTCGCATGCAGGACAGAGCTGTCGACAGTGAAAGAT
ATGGTAGTCTTGGTCGAGCCTTCTTCCACATTCTTCGAACAGAGGGTGTC
AGAGGACTCTACCGTGGTCTATCGGCAAATATAGCTCGTGTTACCCCCCA
AGCGGCAGTTACTTTTATTACATATGAGCAGATTCTTGGAATAACTGCTT
CGCAGTCAACGGGACGCTGA
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protein sequence of Ggra2361.t1

>Ggra2361.t1 ID=Ggra2361.t1|Name=Ggra2361.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=390bp
MEVCRRPYPMPINNGMMLADLGSPGVAIALSTESAYAPPKLTVTRAIPFK
HDASSPIQNLAAQRCSLQPKIPPPSLHPLRNEGSSKSLSGPPVLIYPPYA
HAFAGAGAGLATVLLLHPLDTLRTRLQVSTSGAALRILRNMVLREGSIAL
YKGVVPAAFGSVFSWACYFHWFQQAHSFYRRRVPYDPVSHLLAGSTAGAV
TSFATNPIWVVKVRLQLQAVHSVHRAQVKPYSGFSDGLQSILREEGIRGL
YRGLGPSLWLVSHGAIQFTLYEQFKAWLKARGDLGKRQGAAATTTVYQSL
IASTASKLIASVSTYPIQVARTRMQDRAVDSERYGSLGRAFFHILRTEGV
RGLYRGLSANIARVTPQAAVTFITYEQILGITASQSTGR*
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mRNA from alignment at tig00000005_pilon:32435..33604-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2361.t1 ID=Ggra2361.t1|Name=Ggra2361.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1170bp|location=Sequence derived from alignment at tig00000005_pilon:32435..33604- (Gracilaria gracilis GNS1m male)
ATGGAAGTGTGTCGCCGGCCGTACCCGATGCCAATCAATAATGGCATGAT
GCTGGCTGACTTGGGCAGCCCGGGGGTTGCAATCGCCCTTTCAACGGAGT
CTGCGTACGCCCCACCAAAGCTAACGGTCACGCGTGCCATTCCGTTTAAG
CACGACGCCTCATCGCCGATCCAGAACCTAGCAGCACAACGCTGCTCACT
GCAACCAAAGATTCCACCGCCAAGCTTGCACCCGCTCCGCAATGAAGGCT
CCTCCAAATCGCTAAGCGGGCCTCCAGTTCTGATTTATCCGCCCTATGCG
CATGCATTCGCTGGAGCTGGAGCTGGTTTGGCCACTGTTTTGCTGTTGCA
TCCTTTGGACACATTGCGGACAAGACTGCAAGTATCTACAAGTGGCGCCG
CATTGCGAATCCTTCGGAACATGGTTCTGCGTGAAGGGTCGATAGCTCTT
TACAAGGGTGTGGTGCCTGCTGCCTTTGGAAGCGTTTTTTCCTGGGCGTG
TTACTTTCATTGGTTCCAGCAAGCACATTCATTCTATCGGAGGCGAGTTC
CTTACGACCCTGTATCACATTTGCTCGCCGGAAGCACTGCAGGTGCCGTG
ACATCCTTTGCCACAAATCCGATTTGGGTAGTGAAGGTTCGTTTGCAGCT
GCAGGCCGTGCATTCAGTCCATCGGGCACAAGTAAAACCATACAGTGGTT
TTTCAGATGGGCTCCAATCCATCTTGAGAGAGGAAGGGATACGTGGATTG
TACAGAGGATTGGGGCCAAGTTTGTGGCTTGTTTCGCACGGCGCCATTCA
ATTCACGCTATATGAGCAGTTCAAAGCGTGGCTGAAAGCACGAGGCGACC
TCGGGAAACGACAAGGTGCTGCGGCAACTACCACGGTATATCAATCTCTC
ATTGCTTCCACAGCATCCAAACTAATTGCCTCCGTGAGCACATACCCCAT
TCAAGTTGCAAGAACTCGCATGCAGGACAGAGCTGTCGACAGTGAAAGAT
ATGGTAGTCTTGGTCGAGCCTTCTTCCACATTCTTCGAACAGAGGGTGTC
AGAGGACTCTACCGTGGTCTATCGGCAAATATAGCTCGTGTTACCCCCCA
AGCGGCAGTTACTTTTATTACATATGAGCAGATTCTTGGAATAACTGCTT
CGCAGTCAACGGGACGCTGA
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Coding sequence (CDS) from alignment at tig00000005_pilon:32435..33604-

>Ggra2361.t1 ID=Ggra2361.t1|Name=Ggra2361.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1170bp|location=Sequence derived from alignment at tig00000005_pilon:32435..33604- (Gracilaria gracilis GNS1m male)
ATGGAAGTGTGTCGCCGGCCGTACCCGATGCCAATCAATAATGGCATGAT
GCTGGCTGACTTGGGCAGCCCGGGGGTTGCAATCGCCCTTTCAACGGAGT
CTGCGTACGCCCCACCAAAGCTAACGGTCACGCGTGCCATTCCGTTTAAG
CACGACGCCTCATCGCCGATCCAGAACCTAGCAGCACAACGCTGCTCACT
GCAACCAAAGATTCCACCGCCAAGCTTGCACCCGCTCCGCAATGAAGGCT
CCTCCAAATCGCTAAGCGGGCCTCCAGTTCTGATTTATCCGCCCTATGCG
CATGCATTCGCTGGAGCTGGAGCTGGTTTGGCCACTGTTTTGCTGTTGCA
TCCTTTGGACACATTGCGGACAAGACTGCAAGTATCTACAAGTGGCGCCG
CATTGCGAATCCTTCGGAACATGGTTCTGCGTGAAGGGTCGATAGCTCTT
TACAAGGGTGTGGTGCCTGCTGCCTTTGGAAGCGTTTTTTCCTGGGCGTG
TTACTTTCATTGGTTCCAGCAAGCACATTCATTCTATCGGAGGCGAGTTC
CTTACGACCCTGTATCACATTTGCTCGCCGGAAGCACTGCAGGTGCCGTG
ACATCCTTTGCCACAAATCCGATTTGGGTAGTGAAGGTTCGTTTGCAGCT
GCAGGCCGTGCATTCAGTCCATCGGGCACAAGTAAAACCATACAGTGGTT
TTTCAGATGGGCTCCAATCCATCTTGAGAGAGGAAGGGATACGTGGATTG
TACAGAGGATTGGGGCCAAGTTTGTGGCTTGTTTCGCACGGCGCCATTCA
ATTCACGCTATATGAGCAGTTCAAAGCGTGGCTGAAAGCACGAGGCGACC
TCGGGAAACGACAAGGTGCTGCGGCAACTACCACGGTATATCAATCTCTC
ATTGCTTCCACAGCATCCAAACTAATTGCCTCCGTGAGCACATACCCCAT
TCAAGTTGCAAGAACTCGCATGCAGGACAGAGCTGTCGACAGTGAAAGAT
ATGGTAGTCTTGGTCGAGCCTTCTTCCACATTCTTCGAACAGAGGGTGTC
AGAGGACTCTACCGTGGTCTATCGGCAAATATAGCTCGTGTTACCCCCCA
AGCGGCAGTTACTTTTATTACATATGAGCAGATTCTTGGAATAACTGCTT
CGCAGTCAACGGGACGCTGA
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