Ggra2351.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2351.t1
Unique NameGgra2351.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length131
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000122_piloncontigtig00000122_pilon:430297..430689 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2351Ggra2351Gracilaria gracilis GNS1m malegenetig00000122_pilon 430297..430689 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2351.t1.start1Ggra2351.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000122_pilon 430297..430299 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2351.t1.CDS1Ggra2351.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000122_pilon 430297..430689 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2351.t1.exon1Ggra2351.t1.exon1Gracilaria gracilis GNS1m maleexontig00000122_pilon 430297..430689 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2351.t1.stop1Ggra2351.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000122_pilon 430687..430689 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2351.t1Ggra2351.t1Gracilaria gracilis GNS1m malepolypeptidetig00000122_pilon 430297..430689 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2351.t1 ID=Ggra2351.t1|Name=Ggra2351.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=131bp
MSSSTRSQTSAKYDRLMRSVSIVEPITEVGLQLREVANYVLSMYSVTNDS
RSTIPFTAIRKDEIENMMKSVLPSPESILTPVFFNSPLFPIQLLREVATL
YELDAVPAGIIFSLHLESRETANRSMITHI*
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spliced messenger RNA

>Ggra2351.t1 ID=Ggra2351.t1|Name=Ggra2351.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=393bp|location=Sequence derived from alignment at tig00000122_pilon:430297..430689+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTTCCTCTACTCGATCTCAGACTTCAGCAAAGTATGATCGTCTAAT
GCGATCAGTCTCGATTGTGGAACCCATAACAGAAGTCGGTCTCCAGCTGC
GTGAAGTTGCTAATTATGTGTTGTCAATGTACTCAGTCACCAATGACTCT
AGATCCACAATTCCATTCACCGCTATCCGTAAGGACGAGATCGAAAACAT
GATGAAAAGTGTCCTCCCATCCCCGGAGAGCATTTTAACTCCTGTGTTCT
TCAACTCTCCTCTTTTTCCCATTCAGTTGCTTCGCGAGGTGGCTACTTTG
TATGAATTGGACGCCGTACCAGCTGGTATTATATTTTCTCTTCATCTCGA
GTCTCGTGAAACCGCCAATCGATCCATGATTACCCATATATGA
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protein sequence of Ggra2351.t1

>Ggra2351.t1 ID=Ggra2351.t1|Name=Ggra2351.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=131bp
MSSSTRSQTSAKYDRLMRSVSIVEPITEVGLQLREVANYVLSMYSVTNDS
RSTIPFTAIRKDEIENMMKSVLPSPESILTPVFFNSPLFPIQLLREVATL
YELDAVPAGIIFSLHLESRETANRSMITHI*
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mRNA from alignment at tig00000122_pilon:430297..430689+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2351.t1 ID=Ggra2351.t1|Name=Ggra2351.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=393bp|location=Sequence derived from alignment at tig00000122_pilon:430297..430689+ (Gracilaria gracilis GNS1m male)
ATGTCTTCCTCTACTCGATCTCAGACTTCAGCAAAGTATGATCGTCTAAT
GCGATCAGTCTCGATTGTGGAACCCATAACAGAAGTCGGTCTCCAGCTGC
GTGAAGTTGCTAATTATGTGTTGTCAATGTACTCAGTCACCAATGACTCT
AGATCCACAATTCCATTCACCGCTATCCGTAAGGACGAGATCGAAAACAT
GATGAAAAGTGTCCTCCCATCCCCGGAGAGCATTTTAACTCCTGTGTTCT
TCAACTCTCCTCTTTTTCCCATTCAGTTGCTTCGCGAGGTGGCTACTTTG
TATGAATTGGACGCCGTACCAGCTGGTATTATATTTTCTCTTCATCTCGA
GTCTCGTGAAACCGCCAATCGATCCATGATTACCCATATATGA
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Coding sequence (CDS) from alignment at tig00000122_pilon:430297..430689+

>Ggra2351.t1 ID=Ggra2351.t1|Name=Ggra2351.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=393bp|location=Sequence derived from alignment at tig00000122_pilon:430297..430689+ (Gracilaria gracilis GNS1m male)
ATGTCTTCCTCTACTCGATCTCAGACTTCAGCAAAGTATGATCGTCTAAT
GCGATCAGTCTCGATTGTGGAACCCATAACAGAAGTCGGTCTCCAGCTGC
GTGAAGTTGCTAATTATGTGTTGTCAATGTACTCAGTCACCAATGACTCT
AGATCCACAATTCCATTCACCGCTATCCGTAAGGACGAGATCGAAAACAT
GATGAAAAGTGTCCTCCCATCCCCGGAGAGCATTTTAACTCCTGTGTTCT
TCAACTCTCCTCTTTTTCCCATTCAGTTGCTTCGCGAGGTGGCTACTTTG
TATGAATTGGACGCCGTACCAGCTGGTATTATATTTTCTCTTCATCTCGA
GTCTCGTGAAACCGCCAATCGATCCATGATTACCCATATATGA
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