Ggra2274.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2274.t1
Unique NameGgra2274.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length289
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:984415..985281 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2274Ggra2274Gracilaria gracilis GNS1m malegenetig00000900_pilon 984415..985281 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2274.t1.stop1Ggra2274.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000900_pilon 984415..984417 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2274.t1.CDS1Ggra2274.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000900_pilon 984415..985281 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2274.t1.exon1Ggra2274.t1.exon1Gracilaria gracilis GNS1m maleexontig00000900_pilon 984415..985281 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2274.t1.start1Ggra2274.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000900_pilon 985279..985281 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2274.t1Ggra2274.t1Gracilaria gracilis GNS1m malepolypeptidetig00000900_pilon 984415..985281 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2274.t1 ID=Ggra2274.t1|Name=Ggra2274.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=289bp
MLFSYFVSERAAKEARRRARVLAQRKKRTIIRYSLVLFATLLLLTAASVL
FSRTSVYTEPSDEQVSVPDHPEHALATHPQQALEHPPTVSETDIQSSTHT
AADLQPLTEQQSISLQRDESTQQQDQSNSKLDDTLPLTATASSPNTSHPL
ASVSTRDEPGSDGAPASIQENTSSEKAHLSQLSVRQQPLDTIGDEEGGNG
IIITLDKKASHSSASRKENLSNDLRTANSPQAELKTDVKVSSVDGTLNSH
TNSNDAAQALTTNYKSSLQLPSMDTNTEASQETRRTAM*
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spliced messenger RNA

>Ggra2274.t1 ID=Ggra2274.t1|Name=Ggra2274.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=867bp|location=Sequence derived from alignment at tig00000900_pilon:984415..985281- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTCTTCTCCTACTTTGTCTCCGAGCGAGCGGCGAAAGAAGCTCGTCG
TCGCGCCCGCGTTCTTGCACAGAGAAAGAAACGCACAATAATTCGCTACT
CGTTGGTTCTATTCGCCACATTGCTTCTGTTAACTGCAGCCTCCGTTCTG
TTCTCTCGCACGAGTGTATACACCGAGCCCTCTGACGAGCAAGTGAGTGT
GCCTGACCATCCAGAGCACGCACTTGCAACTCATCCACAACAAGCATTGG
AACATCCACCCACAGTGAGCGAAACAGATATTCAATCGTCCACGCATACA
GCTGCAGATTTGCAACCGCTCACAGAGCAGCAGTCCATTTCTCTGCAGCG
AGACGAAAGTACACAACAGCAAGATCAGTCAAATTCCAAGTTGGACGACA
CTCTACCACTCACTGCAACTGCATCCTCCCCAAATACGTCACATCCCCTT
GCTTCGGTTTCCACCAGAGATGAGCCTGGCTCTGATGGCGCCCCTGCATC
AATCCAAGAAAATACCTCCTCCGAAAAGGCGCATCTGTCGCAACTCAGCG
TCCGTCAGCAACCTTTAGATACCATTGGTGATGAAGAGGGAGGCAATGGT
ATAATAATCACACTGGACAAAAAAGCATCTCACTCCTCAGCATCACGAAA
GGAAAACCTCTCTAATGATTTGCGTACGGCGAACAGTCCACAAGCCGAAC
TCAAGACTGATGTGAAGGTCTCAAGTGTTGATGGTACTCTAAACAGTCAT
ACGAACTCCAATGATGCTGCTCAAGCTCTTACCACGAATTACAAGTCCTC
TTTACAGCTCCCGTCAATGGACACTAACACAGAAGCAAGCCAGGAGACTC
GACGCACCGCCATGTGA
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protein sequence of Ggra2274.t1

>Ggra2274.t1 ID=Ggra2274.t1|Name=Ggra2274.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=289bp
MLFSYFVSERAAKEARRRARVLAQRKKRTIIRYSLVLFATLLLLTAASVL
FSRTSVYTEPSDEQVSVPDHPEHALATHPQQALEHPPTVSETDIQSSTHT
AADLQPLTEQQSISLQRDESTQQQDQSNSKLDDTLPLTATASSPNTSHPL
ASVSTRDEPGSDGAPASIQENTSSEKAHLSQLSVRQQPLDTIGDEEGGNG
IIITLDKKASHSSASRKENLSNDLRTANSPQAELKTDVKVSSVDGTLNSH
TNSNDAAQALTTNYKSSLQLPSMDTNTEASQETRRTAM*
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mRNA from alignment at tig00000900_pilon:984415..985281-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2274.t1 ID=Ggra2274.t1|Name=Ggra2274.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=867bp|location=Sequence derived from alignment at tig00000900_pilon:984415..985281- (Gracilaria gracilis GNS1m male)
ATGCTCTTCTCCTACTTTGTCTCCGAGCGAGCGGCGAAAGAAGCTCGTCG
TCGCGCCCGCGTTCTTGCACAGAGAAAGAAACGCACAATAATTCGCTACT
CGTTGGTTCTATTCGCCACATTGCTTCTGTTAACTGCAGCCTCCGTTCTG
TTCTCTCGCACGAGTGTATACACCGAGCCCTCTGACGAGCAAGTGAGTGT
GCCTGACCATCCAGAGCACGCACTTGCAACTCATCCACAACAAGCATTGG
AACATCCACCCACAGTGAGCGAAACAGATATTCAATCGTCCACGCATACA
GCTGCAGATTTGCAACCGCTCACAGAGCAGCAGTCCATTTCTCTGCAGCG
AGACGAAAGTACACAACAGCAAGATCAGTCAAATTCCAAGTTGGACGACA
CTCTACCACTCACTGCAACTGCATCCTCCCCAAATACGTCACATCCCCTT
GCTTCGGTTTCCACCAGAGATGAGCCTGGCTCTGATGGCGCCCCTGCATC
AATCCAAGAAAATACCTCCTCCGAAAAGGCGCATCTGTCGCAACTCAGCG
TCCGTCAGCAACCTTTAGATACCATTGGTGATGAAGAGGGAGGCAATGGT
ATAATAATCACACTGGACAAAAAAGCATCTCACTCCTCAGCATCACGAAA
GGAAAACCTCTCTAATGATTTGCGTACGGCGAACAGTCCACAAGCCGAAC
TCAAGACTGATGTGAAGGTCTCAAGTGTTGATGGTACTCTAAACAGTCAT
ACGAACTCCAATGATGCTGCTCAAGCTCTTACCACGAATTACAAGTCCTC
TTTACAGCTCCCGTCAATGGACACTAACACAGAAGCAAGCCAGGAGACTC
GACGCACCGCCATGTGA
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Coding sequence (CDS) from alignment at tig00000900_pilon:984415..985281-

>Ggra2274.t1 ID=Ggra2274.t1|Name=Ggra2274.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=867bp|location=Sequence derived from alignment at tig00000900_pilon:984415..985281- (Gracilaria gracilis GNS1m male)
ATGCTCTTCTCCTACTTTGTCTCCGAGCGAGCGGCGAAAGAAGCTCGTCG
TCGCGCCCGCGTTCTTGCACAGAGAAAGAAACGCACAATAATTCGCTACT
CGTTGGTTCTATTCGCCACATTGCTTCTGTTAACTGCAGCCTCCGTTCTG
TTCTCTCGCACGAGTGTATACACCGAGCCCTCTGACGAGCAAGTGAGTGT
GCCTGACCATCCAGAGCACGCACTTGCAACTCATCCACAACAAGCATTGG
AACATCCACCCACAGTGAGCGAAACAGATATTCAATCGTCCACGCATACA
GCTGCAGATTTGCAACCGCTCACAGAGCAGCAGTCCATTTCTCTGCAGCG
AGACGAAAGTACACAACAGCAAGATCAGTCAAATTCCAAGTTGGACGACA
CTCTACCACTCACTGCAACTGCATCCTCCCCAAATACGTCACATCCCCTT
GCTTCGGTTTCCACCAGAGATGAGCCTGGCTCTGATGGCGCCCCTGCATC
AATCCAAGAAAATACCTCCTCCGAAAAGGCGCATCTGTCGCAACTCAGCG
TCCGTCAGCAACCTTTAGATACCATTGGTGATGAAGAGGGAGGCAATGGT
ATAATAATCACACTGGACAAAAAAGCATCTCACTCCTCAGCATCACGAAA
GGAAAACCTCTCTAATGATTTGCGTACGGCGAACAGTCCACAAGCCGAAC
TCAAGACTGATGTGAAGGTCTCAAGTGTTGATGGTACTCTAAACAGTCAT
ACGAACTCCAATGATGCTGCTCAAGCTCTTACCACGAATTACAAGTCCTC
TTTACAGCTCCCGTCAATGGACACTAACACAGAAGCAAGCCAGGAGACTC
GACGCACCGCCATGTGA
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