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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra2250.t1.stop1 | Ggra2250.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000900_pilon 908251..908253 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra2250.t1.start1 | Ggra2250.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000900_pilon 911600..911602 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra2250.t1 ID=Ggra2250.t1|Name=Ggra2250.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=750bp MIDLVSPHETKRHSLIDMRSESESASHPAPTSSNVLAPELATRSLFSSHH VPQEDDPDIVALQTAFLGLVHRYSERISSTDQNLQLSMCGLLHLLLQSLQ IMVGSFVIEDNRLKNVAFVGHQPTFRILMKNYMDSKQGEASNFSDWATPL IGGFHAEKQIIFSAVKQFFPHSTLNTDETDEFGMRLAFERDKRTASNVHL MLSKMKEVGHLSDEHLSGDNLSNAFTGEEVDIGHAGNLLSIKLPCKKRKA EAGSALFAKRAKVIANYKQRLIDALESAEEKESVDEIGTALRTCTTNAYI KSERCQAYRECLDGDIPYHGSKALFLSAFRTYYKGRSATFCRDGHAAHPR GYRYVYVDIMNLVHAQPRSSPDVKCLLEMIGLSVLENMRTFAIGTRALEL EEVHFNCDIPVIAVPQKRNEQEGRDIMRSADTSECIFLSIQEPYDKNKSW SSVLSDREETDFVASIYMWAVLKRARRLNLDNKNRSISSHSHGFACFTHE ISLEVQNSALGTNIDDIEIVRVAASADHRSEEAHLLVFQKALVGTNDLVL AARDDGVRDSFHAESETAMFYDMYLQSQYQTSEWKGPGKDAGILMLSKGT ESTIIAVLQPFIRGFGLFHKLGSSFWDIDGLLDALETLQFGKEAFAKCYA LAGCDFVPFTRHVSHKSYLYASMQNSRAIDSVGSVSSRRWCEVLTAFAYL QRFKGTSQDAVPRPKSEDLYPHQRMSIQDWMEKVRVYLDGCFGVLGMLF* back to topspliced messenger RNA >Ggra2250.t1 ID=Ggra2250.t1|Name=Ggra2250.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2250bp|location=Sequence derived from alignment at tig00000900_pilon:908251..911602- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGATTGATCTTGTCTCCCCACATGAAACAAAAAGACACTCTCTTATAGA TATGCGCTCAGAGTCTGAGAGTGCTTCGCATCCAGCGCCTACTTCGTCCA ATGTTCTCGCCCCAGAACTTGCCACAAGAAGTTTATTTTCAAGTCATCAT GTTCCGCAGGAAGATGATCCTGATATTGTTGCATTGCAAACGGCATTCTT GGGCCTGGTTCATCGATACAGTGAAAGAATTTCTTCTACGGATCAAAACT TGCAGCTTAGCATGTGCGGCTTACTGCATCTGCTCTTGCAGAGTTTGCAG ATAATGGTTGGAAGCTTCGTCATTGAAGATAACCGACTCAAGAACGTCGC GTTTGTCGGCCATCAACCCACGTTTAGAATCTTGATGAAAAACTATATGG ATTCTAAGCAAGGTGAGGCATCTAACTTCTCAGACTGGGCCACGCCACTT ATCGGTGGATTTCATGCAGAGAAGCAAATCATTTTCTCTGCTGTGAAGCA ATTTTTTCCTCATTCTACACTTAACACAGACGAGACCGACGAGTTTGGGA TGCGTCTAGCTTTTGAGCGAGACAAGAGAACAGCGTCAAACGTTCACCTT ATGCTTTCGAAAATGAAAGAAGTTGGGCATTTGAGCGACGAGCATCTATC CGGAGATAATCTGTCAAATGCATTTACTGGAGAGGAAGTAGACATTGGTC ATGCAGGAAACTTGCTTAGCATAAAGCTCCCATGTAAAAAGAGAAAAGCG GAGGCCGGGTCTGCACTCTTTGCAAAGAGGGCAAAAGTGATTGCGAATTA CAAGCAAAGATTAATTGATGCTTTAGAAAGCGCTGAAGAAAAGGAAAGCG TAGACGAGATTGGTACGGCACTACGGACCTGCACAACGAATGCTTACATT AAGTCTGAGCGGTGTCAGGCATATCGTGAGTGTCTTGATGGTGATATCCC CTACCACGGCAGCAAAGCGTTGTTTCTATCAGCCTTTAGAACGTACTACA AGGGTCGCTCAGCTACGTTCTGTAGAGATGGTCACGCTGCCCATCCCAGA GGTTACCGTTATGTATATGTCGATATTATGAACCTGGTTCATGCTCAGCC GAGAAGCTCTCCTGATGTGAAATGTCTACTGGAAATGATTGGTCTTTCGG TACTGGAAAACATGCGAACATTCGCAATCGGTACACGCGCCTTAGAGCTA GAAGAAGTTCATTTTAACTGTGACATTCCCGTAATTGCTGTTCCACAGAA GCGAAACGAGCAGGAAGGGCGGGATATCATGCGCTCTGCTGACACAAGTG AATGTATTTTCCTATCAATTCAAGAACCATATGACAAAAACAAATCTTGG TCTTCTGTTTTGTCAGACAGAGAGGAGACGGATTTTGTGGCATCCATTTA CATGTGGGCAGTCTTGAAAAGGGCACGGAGGTTGAACTTGGACAACAAAA ACAGATCCATTTCGTCGCACAGCCATGGATTTGCTTGCTTTACACACGAA ATTTCGTTGGAAGTGCAGAACTCGGCGCTGGGTACAAACATTGATGATAT AGAAATAGTTCGTGTGGCAGCATCGGCAGATCATCGCTCAGAGGAAGCTC ATTTGCTAGTCTTTCAGAAGGCTCTAGTTGGAACAAATGATCTAGTACTT GCTGCAAGGGACGACGGTGTTCGGGACTCTTTCCATGCAGAAAGTGAAAC TGCCATGTTCTACGACATGTATTTGCAATCACAATACCAAACGTCTGAAT GGAAAGGTCCAGGGAAAGATGCTGGAATACTTATGCTTTCAAAAGGTACA GAAAGTACCATAATTGCTGTTCTTCAGCCTTTCATAAGAGGATTCGGCCT TTTTCACAAGCTTGGGAGCTCATTTTGGGACATAGATGGATTACTTGATG CTCTCGAGACACTTCAATTTGGCAAAGAAGCCTTTGCGAAGTGCTACGCG CTTGCAGGCTGTGACTTTGTACCGTTTACAAGACATGTATCACACAAATC GTACTTGTACGCATCGATGCAAAACTCAAGAGCAATAGATTCTGTTGGTT CCGTGAGCTCCAGAAGATGGTGTGAAGTACTGACAGCATTTGCTTACTTG CAGCGTTTTAAAGGCACCAGTCAGGATGCTGTTCCTCGCCCGAAGTCTGA AGACCTCTATCCACACCAACGAATGTCGATCCAGGATTGGATGGAGAAGG TTCGAGTGTATCTTGATGGGTGCTTCGGTGTTCTCGGAATGCTATTTTAG back to topprotein sequence of Ggra2250.t1 >Ggra2250.t1 ID=Ggra2250.t1|Name=Ggra2250.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=750bp
MIDLVSPHETKRHSLIDMRSESESASHPAPTSSNVLAPELATRSLFSSHH VPQEDDPDIVALQTAFLGLVHRYSERISSTDQNLQLSMCGLLHLLLQSLQ IMVGSFVIEDNRLKNVAFVGHQPTFRILMKNYMDSKQGEASNFSDWATPL IGGFHAEKQIIFSAVKQFFPHSTLNTDETDEFGMRLAFERDKRTASNVHL MLSKMKEVGHLSDEHLSGDNLSNAFTGEEVDIGHAGNLLSIKLPCKKRKA EAGSALFAKRAKVIANYKQRLIDALESAEEKESVDEIGTALRTCTTNAYI KSERCQAYRECLDGDIPYHGSKALFLSAFRTYYKGRSATFCRDGHAAHPR GYRYVYVDIMNLVHAQPRSSPDVKCLLEMIGLSVLENMRTFAIGTRALEL EEVHFNCDIPVIAVPQKRNEQEGRDIMRSADTSECIFLSIQEPYDKNKSW SSVLSDREETDFVASIYMWAVLKRARRLNLDNKNRSISSHSHGFACFTHE ISLEVQNSALGTNIDDIEIVRVAASADHRSEEAHLLVFQKALVGTNDLVL AARDDGVRDSFHAESETAMFYDMYLQSQYQTSEWKGPGKDAGILMLSKGT ESTIIAVLQPFIRGFGLFHKLGSSFWDIDGLLDALETLQFGKEAFAKCYA LAGCDFVPFTRHVSHKSYLYASMQNSRAIDSVGSVSSRRWCEVLTAFAYL QRFKGTSQDAVPRPKSEDLYPHQRMSIQDWMEKVRVYLDGCFGVLGMLF* back to topmRNA from alignment at tig00000900_pilon:908251..911602- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra2250.t1 ID=Ggra2250.t1|Name=Ggra2250.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=3352bp|location=Sequence derived from alignment at tig00000900_pilon:908251..911602- (Gracilaria gracilis GNS1m male) ATGATTGATCTTGTCTCCCCACATGAAACAAAAAGACACTCTCTTATAGA
TATGCGCTCAGAGTCTGAGAGTGCTTCGCATCCAGCGCCTACTTCGTCCA
ATGTTCTCGCCCCAGAACTTGCCACAAGAAGTTTATTTTCAAGTCATCAT
GTTCCGCAGGAAGATGATCCTGATATTGTTGCATTGCAAACGGCATTCTT
GGGCCTGGTTCATCGATACAGTGAAAGAATTTCTTCTACGGATCAAAACT
TGCAGCTTAGCATGTGCGGCTTACTGCATCTGCTCTTGCAGAGTTTGCAG
ATAATGGTTGGAAGCTTCGTCATGTAGACATCGATCCTACAACAATGCGG
CGAACAAAGCTGTAGTGGACAGCAAAGTAGCTCTCATCCAGAATCTCTAT
CGCCCAAGATGCAGTGAAGATAACCGACTCAAGAACGTCGCGTTTGTCGG
CCATCAACCCACGTTTAGAATCTTGATGAAAAACTATATGGATTCTAAGC
AAGGTGAGGCATCTAACTTCTCAGACTGGGCCACGCCACTTATCGGTGGA
TTTCATGCAGAGAAGCAAATCATTTTCTCTGCTGTGAAGCAATTTTTGTA
CGGTTCAGGTTTGTAAGAGCTGGTAAAGTGTACAAGACTTTCTAAGTATC
ATCAAGAGAACTTCTTGTCACTACATCATGCAAGGAAAAACCGGCGTGTT
TGTTTGGAGATTGCAACTGCTTTAAGCATTCTTGCGTGCGAACGAGTCAT
GAACGAAGATCCGAAAGCATATGACGCTGTCGACAGAGCGCATGAACAGA
ATATGAGAATTTCATACGCTTCCCGGTTCATCTGTAAGGTTTAGTCATGC
AGTTTCAAAATCAGACCGTTCCGAATGAGCTGCTCTAAGAGATGGGTTGT
TGAGATTATCAACAAAGAGTTCAAACGCCCGCTGGCATTGGAAATGTATA
CTGTTAGATGGGCTTATTCCTTGTATGTGGTATTACGCCTTGCAGAGATC
TGGCCAGACCGACATTGTGGATAAGCCATTTTTCTGGTACCTGCCCGCTG
TCATGTGTACAAACAAGGTGAACTATCAAGAACTCCTCTTAATGTACGCC
TACATCAAAAGTACTATGTCGCGTGAGCTGTATAATGTGCTTTACAATGA
TGTCCCCGTGCAATCGCTATTAACACGAGCCAATCTTGCAGCCGCCAAAC
CAATCTTTGGCATGATGAGTGTCTAGAAAGCAACATTATAAGAAACAAAA
AAGCACTGAATTCCAAAGATTTCAAGGCGCTTTCGGAGTCGGTCTCGTGG
TGCCAACATGTCTCAGAAGCTTTCTTTAAGGTCTTTCGAGAGTTTTCTCC
TTTTCGCAGTCCTCATTCTACACTTAACACAGACGAGACCGACGAGTTTG
GGATGCGTCTAGCTTTTGAGCGAGACAAGAGAACAGCGTCAAACGTTCAC
CTTATGCTTTCGAAAATGAAAGAAGTTGGGCATTTGAGCGACGAGCATCT
ATCCGGAGATAATCTGTCAAATGCATTTACTGGAGAGGAAGTAGACATTG
GTCATGCAGGAAACTTGCTTAGTATTCGCTAGAAAGGTTTGAAAGTCGCT
GAGTTGTTTCTTTCTTGCAAGTTCCCCAGTATCTTTGGTCGTATTTCTTC
TGATGAAGAACGTACGTGTTTTGGGGGCAGTGCCCCAAAAGGCAGATTCA
CAACCCGATTTGCTGAGAAGAACTTCATGAAATTGTATTCTTTACGTAAC
ACAGGCATAAAGCTCCCATGTAAAAAGAGAAAAGCGGAGGCCGGGTCTGC
ACTCTTTGCAAAGAGGGCAAAAGTGATTGCGAATTACAAGCAAAGATTAA
TTGATGCTTTAGAAAGCGCTGAAGAAAAGGAAAGCGTAGACGAGATTGGT
ACGGCACTACGGACCTGCACAACGAATGCTTACATTAAGTCTGAGCGGTG
TCAGGCATATCGTGAGTGTCTTGATGGTGATATCCCCTACCACGGCAGCA
AAGCGTTGTTTCTATCAGCCTTTAGAACGTACTACAAGGGTCGCTCAGCT
ACGTTCTGTAGAGATGGTCACGCTGCCCATCCCAGAGGTTACCGTTATGT
ATATGTCGATATTATGAACCTGGTTCATGCTCAGCCGAGAAGCTCTCCTG
ATGTGAAATGTCTACTGGAAATGATTGGTCTTTCGGTACTGGAAAACATG
CGAACATTCGCAATCGGTACACGCGCCTTAGAGCTAGAAGAAGTTCATTT
TAACTGTGACATTCCCGTAATTGCTGTTCCACAGAAGCGAAACGAGCAGG
AAGGGCGGGATATCATGCGCTCTGCTGACACAAGTGAATGTATTTTCCTA
TCAATTCAAGAACCATATGACAAAAACAAATCTTGGTCTTCTGTTTTGTC
AGACAGAGAGGAGACGGATTTTGTGGCATCCATTTACATGTGGGCAGTCT
TGAAAAGGGCACGGAGGTTGAACTTGGACAACAAAAACAGATCCATTTCG
TCGCACAGCCATGGATTTGCTTGCTTTACACACGAAATTTCGTTGGAAGT
GCAGAACTCGGCGCTGGGTACAAACATTGATGATATAGAAATAGTTCGTG
TGGCAGCATCGGCAGATCATCGCTCAGAGGAAGCTCATTTGCTAGTCTTT
CAGAAGGCTCTAGTTGGAACAAATGATCTAGTACTTGCTGCAAGGGACGA
CGGTGTTCGTAGGTATGAATGAGGATCCTGTTTTGGAATAACGAGTGATG
GAATTTTTCAGCGCTTCCCTGAAGGGGACTCTTTCCATGCAGAAAGTGAA
ACTGCCATGTTCTACGACATGTATTTGCAATCACAATACCAAACGTCTGA
ATGGAAAGGTCCAGGGAAAGATGCTGGAATACTTATGCTTTCAAAAGGTA
CAGAAAGTACCATAATTGCTGTTCTTCAGCCTTTCATAAGAGGATTCGGC
CTTTTTCACAAGCTTGGGAGCTCATTTTGGGACATAGATGGATTACTTGA
TGCTCTCGAGACACTTCAATTTGGCAAAGAAGCCTTTGCGAAGTGCTACG
CGCTTGCAGGCTGTGACTTTGTACCGTTTACAAGACATGTATCACACAAA
TCGTACTTGTACGCATCGATGCAAAACTCAAGAGCAATAGATTCTGTTGG
TTCCGTGAGCTCCAGAAGATGGTGTGAAGTACTGACAGCATTTGCTTACT
TGCAGCGTTTTAAAGGCACCAGTCAGGATGCTGTTCCTCGCCCGAAGTCT
GAAGACCTCTATCCACACCAACGAATGTCGATCCAGGATTGGATGGAGAA
GGTTCGAGTGTATCTTGATGGGTGCTTCGGTGTTCTCGGAATGCTATTTT
AG back to topCoding sequence (CDS) from alignment at tig00000900_pilon:908251..911602- >Ggra2250.t1 ID=Ggra2250.t1|Name=Ggra2250.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2250bp|location=Sequence derived from alignment at tig00000900_pilon:908251..911602- (Gracilaria gracilis GNS1m male) ATGATTGATCTTGTCTCCCCACATGAAACAAAAAGACACTCTCTTATAGA TATGCGCTCAGAGTCTGAGAGTGCTTCGCATCCAGCGCCTACTTCGTCCA ATGTTCTCGCCCCAGAACTTGCCACAAGAAGTTTATTTTCAAGTCATCAT GTTCCGCAGGAAGATGATCCTGATATTGTTGCATTGCAAACGGCATTCTT GGGCCTGGTTCATCGATACAGTGAAAGAATTTCTTCTACGGATCAAAACT TGCAGCTTAGCATGTGCGGCTTACTGCATCTGCTCTTGCAGAGTTTGCAG ATAATGGTTGGAAGCTTCGTCATTGAAGATAACCGACTCAAGAACGTCGC GTTTGTCGGCCATCAACCCACGTTTAGAATCTTGATGAAAAACTATATGG ATTCTAAGCAAGGTGAGGCATCTAACTTCTCAGACTGGGCCACGCCACTT ATCGGTGGATTTCATGCAGAGAAGCAAATCATTTTCTCTGCTGTGAAGCA ATTTTTTCCTCATTCTACACTTAACACAGACGAGACCGACGAGTTTGGGA TGCGTCTAGCTTTTGAGCGAGACAAGAGAACAGCGTCAAACGTTCACCTT ATGCTTTCGAAAATGAAAGAAGTTGGGCATTTGAGCGACGAGCATCTATC CGGAGATAATCTGTCAAATGCATTTACTGGAGAGGAAGTAGACATTGGTC ATGCAGGAAACTTGCTTAGCATAAAGCTCCCATGTAAAAAGAGAAAAGCG GAGGCCGGGTCTGCACTCTTTGCAAAGAGGGCAAAAGTGATTGCGAATTA CAAGCAAAGATTAATTGATGCTTTAGAAAGCGCTGAAGAAAAGGAAAGCG TAGACGAGATTGGTACGGCACTACGGACCTGCACAACGAATGCTTACATT AAGTCTGAGCGGTGTCAGGCATATCGTGAGTGTCTTGATGGTGATATCCC CTACCACGGCAGCAAAGCGTTGTTTCTATCAGCCTTTAGAACGTACTACA AGGGTCGCTCAGCTACGTTCTGTAGAGATGGTCACGCTGCCCATCCCAGA GGTTACCGTTATGTATATGTCGATATTATGAACCTGGTTCATGCTCAGCC GAGAAGCTCTCCTGATGTGAAATGTCTACTGGAAATGATTGGTCTTTCGG TACTGGAAAACATGCGAACATTCGCAATCGGTACACGCGCCTTAGAGCTA GAAGAAGTTCATTTTAACTGTGACATTCCCGTAATTGCTGTTCCACAGAA GCGAAACGAGCAGGAAGGGCGGGATATCATGCGCTCTGCTGACACAAGTG AATGTATTTTCCTATCAATTCAAGAACCATATGACAAAAACAAATCTTGG TCTTCTGTTTTGTCAGACAGAGAGGAGACGGATTTTGTGGCATCCATTTA CATGTGGGCAGTCTTGAAAAGGGCACGGAGGTTGAACTTGGACAACAAAA ACAGATCCATTTCGTCGCACAGCCATGGATTTGCTTGCTTTACACACGAA ATTTCGTTGGAAGTGCAGAACTCGGCGCTGGGTACAAACATTGATGATAT AGAAATAGTTCGTGTGGCAGCATCGGCAGATCATCGCTCAGAGGAAGCTC ATTTGCTAGTCTTTCAGAAGGCTCTAGTTGGAACAAATGATCTAGTACTT GCTGCAAGGGACGACGGTGTTCGGGACTCTTTCCATGCAGAAAGTGAAAC TGCCATGTTCTACGACATGTATTTGCAATCACAATACCAAACGTCTGAAT GGAAAGGTCCAGGGAAAGATGCTGGAATACTTATGCTTTCAAAAGGTACA GAAAGTACCATAATTGCTGTTCTTCAGCCTTTCATAAGAGGATTCGGCCT TTTTCACAAGCTTGGGAGCTCATTTTGGGACATAGATGGATTACTTGATG CTCTCGAGACACTTCAATTTGGCAAAGAAGCCTTTGCGAAGTGCTACGCG CTTGCAGGCTGTGACTTTGTACCGTTTACAAGACATGTATCACACAAATC GTACTTGTACGCATCGATGCAAAACTCAAGAGCAATAGATTCTGTTGGTT CCGTGAGCTCCAGAAGATGGTGTGAAGTACTGACAGCATTTGCTTACTTG CAGCGTTTTAAAGGCACCAGTCAGGATGCTGTTCCTCGCCCGAAGTCTGA AGACCTCTATCCACACCAACGAATGTCGATCCAGGATTGGATGGAGAAGG TTCGAGTGTATCTTGATGGGTGCTTCGGTGTTCTCGGAATGCTATTTTAG back to top
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