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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 246197.MXAN_5281 |
| Max annot lvl | 28221|Deltaproteobacteria |
| Evalue | 3.64e-71 |
| EggNOG OGs | 28HSN@1|root,2Z7ZT@2|Bacteria,1QPV9@1224|Proteobacteria,437IT@68525|delta/epsilon subdivisions,2X43W@28221|Deltaproteobacteria,2YY6P@29|Myxococcales |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra2199.t1.start1 | Ggra2199.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000900_pilon 616868..616870 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra2199.t1.stop1 | Ggra2199.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000900_pilon 619370..619372 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra2199.t1 ID=Ggra2199.t1|Name=Ggra2199.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=835bp MNTNAGCICCDSGYALSERQSEKFRQWLECLHNIVSGDVRIGSRTPLRDK PIFLTPEVLPGGFANGRLMAGGDLAPFEQELVNKNGWNFSNLSNEYRVQL QNLRKSLNKYFLSPKGLGELFDLLKSGKYHCVYPEEAALLAVLWMLERRD FELARGLVSTIAPYFGDVRFYPHPSSAPKSLDLKCSLLTVGAFKRGVSDM RVSHGSLSYAINKLIVEDCAPSYDRLVSLILATCKKGAFDLIPFEARPSN KMVAAFKILFRRFENVQRMYESFLHLAKRPKKELRQLGESRNCGKLLRFS KAFVERKTKRITRIERSEAQRIIIQIRDRSRRGLPSVWTPGQDFSNAETR LDELPRKLKIFRERQRKTTLAEHQLVSHDWKELSLNRVTKPSVDDQTGID DVGPMTQPVTRREAERHGFTRGTAIPPLICRMVRMLERQPLKAMFERELV PSMEVLAILVDQILGAAQAQTQGPIETRRLYASLLGAFRNRRSLLLFDYE SQVKFEELPWVHRLEEVRREHDDADDRDKSQLLCEMVKLCISKWPDVMIP NKMITALDHMARGFSISTADGPWIGLLPELAADIFMGGFTPKWCLHAALA RKLLASSLYAKYYGTELRKSLWDGMDQIQVDARHKCRQFTSLCTKRGEKQ KMQGYVARNRAVIEESMILTGQNYPYLLEVLDYHGKGFDSKELLEICVKC FQNLKQTMIPALADKTPWQTRTRITKNVAYGWRQLVILVSSMDTKDVEHF FRQTISLEEAVGGCTLQRALVDLRAVWMAMQNEAWTGRPWKPLRGWHSGQ HSLWDKLWCERLRNRAGSRHDSHVRSGDLTLLRV* back to topspliced messenger RNA >Ggra2199.t1 ID=Ggra2199.t1|Name=Ggra2199.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2505bp|location=Sequence derived from alignment at tig00000900_pilon:616868..619372+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGAACACAAACGCAGGATGCATTTGCTGCGATAGTGGATACGCTCTCTC GGAGAGGCAATCGGAAAAATTCCGACAGTGGTTGGAATGCCTTCACAACA TTGTGAGCGGAGATGTTAGAATTGGTTCACGAACGCCACTACGGGACAAG CCCATCTTTCTGACCCCCGAAGTTCTCCCCGGGGGATTTGCAAATGGTCG CCTCATGGCGGGAGGTGACCTCGCCCCTTTTGAACAAGAGTTGGTCAACA AGAATGGCTGGAATTTTTCTAATCTATCCAACGAATACCGAGTCCAGTTG CAGAACTTGAGAAAGTCTTTGAACAAATACTTCTTGTCCCCGAAAGGATT GGGAGAACTATTCGACTTGCTCAAATCTGGAAAGTATCATTGCGTTTATC CAGAAGAGGCAGCACTTCTTGCTGTGCTATGGATGTTAGAACGCCGAGAT TTCGAGCTTGCACGTGGACTGGTGAGTACTATTGCACCCTACTTTGGGGA TGTACGTTTCTACCCCCACCCATCGTCGGCTCCTAAATCTCTGGACCTGA AGTGCAGCTTGCTCACTGTGGGTGCTTTCAAGCGTGGAGTTTCAGACATG CGAGTGTCGCACGGTAGCCTTTCGTATGCCATAAACAAGCTAATTGTGGA GGACTGCGCTCCGAGCTATGACAGGCTCGTATCGCTGATACTAGCCACAT GTAAGAAGGGAGCTTTTGACTTGATACCCTTCGAAGCTCGTCCTTCGAAC AAAATGGTCGCTGCATTTAAGATCCTGTTCCGGCGCTTCGAGAACGTCCA GAGAATGTATGAATCTTTCCTTCATCTAGCCAAGCGTCCAAAAAAAGAAC TGCGGCAGCTTGGAGAATCGCGGAATTGCGGAAAACTGCTGAGGTTCTCA AAGGCCTTTGTCGAAAGAAAGACAAAACGTATAACTCGAATTGAAAGGAG TGAAGCGCAGAGGATAATCATTCAAATACGTGACAGGTCAAGGCGCGGAC TGCCTTCGGTTTGGACACCGGGCCAGGACTTCAGTAACGCGGAAACTAGG TTGGATGAACTTCCCCGTAAGCTGAAAATTTTCAGGGAGCGCCAAAGAAA GACTACATTAGCAGAACACCAACTGGTTTCACATGACTGGAAGGAACTTT CCTTGAATCGCGTTACTAAACCAAGTGTAGACGATCAAACTGGGATTGAT GATGTTGGGCCAATGACCCAACCTGTTACCAGAAGAGAGGCAGAACGTCA CGGGTTTACGCGTGGTACAGCCATACCCCCCTTGATTTGTCGCATGGTAA GAATGCTTGAGAGACAACCTCTGAAAGCGATGTTTGAAAGAGAACTGGTG CCATCTATGGAAGTTTTGGCTATCCTGGTAGATCAAATCTTAGGGGCGGC ACAGGCTCAAACCCAAGGACCCATCGAAACGAGAAGACTTTATGCCTCGC TTTTAGGAGCTTTTCGTAATCGCCGATCTCTACTCCTCTTTGATTATGAA TCTCAAGTCAAGTTTGAAGAACTGCCTTGGGTTCATCGCCTGGAGGAGGT TCGAAGAGAGCACGACGATGCAGACGATCGCGACAAATCTCAACTATTAT GTGAGATGGTTAAATTATGTATATCAAAGTGGCCTGACGTAATGATTCCG AATAAGATGATCACCGCTCTAGATCATATGGCCAGAGGTTTTTCAATATC TACTGCTGATGGCCCTTGGATAGGACTCCTCCCAGAGTTGGCAGCAGATA TATTCATGGGTGGATTCACCCCAAAATGGTGCTTGCATGCCGCTTTGGCG AGGAAATTGCTGGCATCATCGCTTTACGCGAAGTACTACGGCACTGAACT TCGTAAATCTCTTTGGGATGGGATGGATCAAATACAGGTCGATGCTCGTC ATAAATGTCGTCAATTCACGTCGTTGTGTACAAAACGGGGCGAGAAACAA AAAATGCAGGGGTACGTAGCCCGAAACCGAGCTGTTATCGAGGAATCTAT GATACTCACGGGTCAAAACTACCCATACCTCCTTGAAGTGCTGGATTATC ATGGGAAAGGGTTTGATAGCAAAGAGCTCTTAGAGATCTGTGTGAAGTGC TTCCAAAATTTGAAGCAAACGATGATCCCAGCTTTGGCCGATAAGACTCC CTGGCAAACACGCACGCGAATAACTAAAAATGTCGCTTACGGTTGGCGTC AACTTGTTATTCTGGTTTCATCAATGGACACTAAGGACGTGGAGCATTTC TTTCGACAGACTATAAGCCTGGAGGAGGCTGTTGGTGGCTGCACTCTGCA ACGGGCTCTGGTGGATCTAAGAGCGGTATGGATGGCTATGCAAAACGAAG CCTGGACGGGACGTCCATGGAAGCCTCTTCGTGGGTGGCACAGCGGCCAG CACAGTCTCTGGGACAAGTTGTGGTGTGAACGACTGAGGAACAGGGCAGG CTCTCGTCATGACAGCCATGTCCGCAGTGGAGATTTGACGCTGTTAAGGG TATGA back to topprotein sequence of Ggra2199.t1 >Ggra2199.t1 ID=Ggra2199.t1|Name=Ggra2199.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=835bp
MNTNAGCICCDSGYALSERQSEKFRQWLECLHNIVSGDVRIGSRTPLRDK PIFLTPEVLPGGFANGRLMAGGDLAPFEQELVNKNGWNFSNLSNEYRVQL QNLRKSLNKYFLSPKGLGELFDLLKSGKYHCVYPEEAALLAVLWMLERRD FELARGLVSTIAPYFGDVRFYPHPSSAPKSLDLKCSLLTVGAFKRGVSDM RVSHGSLSYAINKLIVEDCAPSYDRLVSLILATCKKGAFDLIPFEARPSN KMVAAFKILFRRFENVQRMYESFLHLAKRPKKELRQLGESRNCGKLLRFS KAFVERKTKRITRIERSEAQRIIIQIRDRSRRGLPSVWTPGQDFSNAETR LDELPRKLKIFRERQRKTTLAEHQLVSHDWKELSLNRVTKPSVDDQTGID DVGPMTQPVTRREAERHGFTRGTAIPPLICRMVRMLERQPLKAMFERELV PSMEVLAILVDQILGAAQAQTQGPIETRRLYASLLGAFRNRRSLLLFDYE SQVKFEELPWVHRLEEVRREHDDADDRDKSQLLCEMVKLCISKWPDVMIP NKMITALDHMARGFSISTADGPWIGLLPELAADIFMGGFTPKWCLHAALA RKLLASSLYAKYYGTELRKSLWDGMDQIQVDARHKCRQFTSLCTKRGEKQ KMQGYVARNRAVIEESMILTGQNYPYLLEVLDYHGKGFDSKELLEICVKC FQNLKQTMIPALADKTPWQTRTRITKNVAYGWRQLVILVSSMDTKDVEHF FRQTISLEEAVGGCTLQRALVDLRAVWMAMQNEAWTGRPWKPLRGWHSGQ HSLWDKLWCERLRNRAGSRHDSHVRSGDLTLLRV* back to topmRNA from alignment at tig00000900_pilon:616868..619372+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra2199.t1 ID=Ggra2199.t1|Name=Ggra2199.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2505bp|location=Sequence derived from alignment at tig00000900_pilon:616868..619372+ (Gracilaria gracilis GNS1m male) ATGAACACAAACGCAGGATGCATTTGCTGCGATAGTGGATACGCTCTCTC
GGAGAGGCAATCGGAAAAATTCCGACAGTGGTTGGAATGCCTTCACAACA
TTGTGAGCGGAGATGTTAGAATTGGTTCACGAACGCCACTACGGGACAAG
CCCATCTTTCTGACCCCCGAAGTTCTCCCCGGGGGATTTGCAAATGGTCG
CCTCATGGCGGGAGGTGACCTCGCCCCTTTTGAACAAGAGTTGGTCAACA
AGAATGGCTGGAATTTTTCTAATCTATCCAACGAATACCGAGTCCAGTTG
CAGAACTTGAGAAAGTCTTTGAACAAATACTTCTTGTCCCCGAAAGGATT
GGGAGAACTATTCGACTTGCTCAAATCTGGAAAGTATCATTGCGTTTATC
CAGAAGAGGCAGCACTTCTTGCTGTGCTATGGATGTTAGAACGCCGAGAT
TTCGAGCTTGCACGTGGACTGGTGAGTACTATTGCACCCTACTTTGGGGA
TGTACGTTTCTACCCCCACCCATCGTCGGCTCCTAAATCTCTGGACCTGA
AGTGCAGCTTGCTCACTGTGGGTGCTTTCAAGCGTGGAGTTTCAGACATG
CGAGTGTCGCACGGTAGCCTTTCGTATGCCATAAACAAGCTAATTGTGGA
GGACTGCGCTCCGAGCTATGACAGGCTCGTATCGCTGATACTAGCCACAT
GTAAGAAGGGAGCTTTTGACTTGATACCCTTCGAAGCTCGTCCTTCGAAC
AAAATGGTCGCTGCATTTAAGATCCTGTTCCGGCGCTTCGAGAACGTCCA
GAGAATGTATGAATCTTTCCTTCATCTAGCCAAGCGTCCAAAAAAAGAAC
TGCGGCAGCTTGGAGAATCGCGGAATTGCGGAAAACTGCTGAGGTTCTCA
AAGGCCTTTGTCGAAAGAAAGACAAAACGTATAACTCGAATTGAAAGGAG
TGAAGCGCAGAGGATAATCATTCAAATACGTGACAGGTCAAGGCGCGGAC
TGCCTTCGGTTTGGACACCGGGCCAGGACTTCAGTAACGCGGAAACTAGG
TTGGATGAACTTCCCCGTAAGCTGAAAATTTTCAGGGAGCGCCAAAGAAA
GACTACATTAGCAGAACACCAACTGGTTTCACATGACTGGAAGGAACTTT
CCTTGAATCGCGTTACTAAACCAAGTGTAGACGATCAAACTGGGATTGAT
GATGTTGGGCCAATGACCCAACCTGTTACCAGAAGAGAGGCAGAACGTCA
CGGGTTTACGCGTGGTACAGCCATACCCCCCTTGATTTGTCGCATGGTAA
GAATGCTTGAGAGACAACCTCTGAAAGCGATGTTTGAAAGAGAACTGGTG
CCATCTATGGAAGTTTTGGCTATCCTGGTAGATCAAATCTTAGGGGCGGC
ACAGGCTCAAACCCAAGGACCCATCGAAACGAGAAGACTTTATGCCTCGC
TTTTAGGAGCTTTTCGTAATCGCCGATCTCTACTCCTCTTTGATTATGAA
TCTCAAGTCAAGTTTGAAGAACTGCCTTGGGTTCATCGCCTGGAGGAGGT
TCGAAGAGAGCACGACGATGCAGACGATCGCGACAAATCTCAACTATTAT
GTGAGATGGTTAAATTATGTATATCAAAGTGGCCTGACGTAATGATTCCG
AATAAGATGATCACCGCTCTAGATCATATGGCCAGAGGTTTTTCAATATC
TACTGCTGATGGCCCTTGGATAGGACTCCTCCCAGAGTTGGCAGCAGATA
TATTCATGGGTGGATTCACCCCAAAATGGTGCTTGCATGCCGCTTTGGCG
AGGAAATTGCTGGCATCATCGCTTTACGCGAAGTACTACGGCACTGAACT
TCGTAAATCTCTTTGGGATGGGATGGATCAAATACAGGTCGATGCTCGTC
ATAAATGTCGTCAATTCACGTCGTTGTGTACAAAACGGGGCGAGAAACAA
AAAATGCAGGGGTACGTAGCCCGAAACCGAGCTGTTATCGAGGAATCTAT
GATACTCACGGGTCAAAACTACCCATACCTCCTTGAAGTGCTGGATTATC
ATGGGAAAGGGTTTGATAGCAAAGAGCTCTTAGAGATCTGTGTGAAGTGC
TTCCAAAATTTGAAGCAAACGATGATCCCAGCTTTGGCCGATAAGACTCC
CTGGCAAACACGCACGCGAATAACTAAAAATGTCGCTTACGGTTGGCGTC
AACTTGTTATTCTGGTTTCATCAATGGACACTAAGGACGTGGAGCATTTC
TTTCGACAGACTATAAGCCTGGAGGAGGCTGTTGGTGGCTGCACTCTGCA
ACGGGCTCTGGTGGATCTAAGAGCGGTATGGATGGCTATGCAAAACGAAG
CCTGGACGGGACGTCCATGGAAGCCTCTTCGTGGGTGGCACAGCGGCCAG
CACAGTCTCTGGGACAAGTTGTGGTGTGAACGACTGAGGAACAGGGCAGG
CTCTCGTCATGACAGCCATGTCCGCAGTGGAGATTTGACGCTGTTAAGGG
TATGA back to topCoding sequence (CDS) from alignment at tig00000900_pilon:616868..619372+ >Ggra2199.t1 ID=Ggra2199.t1|Name=Ggra2199.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2505bp|location=Sequence derived from alignment at tig00000900_pilon:616868..619372+ (Gracilaria gracilis GNS1m male) ATGAACACAAACGCAGGATGCATTTGCTGCGATAGTGGATACGCTCTCTC GGAGAGGCAATCGGAAAAATTCCGACAGTGGTTGGAATGCCTTCACAACA TTGTGAGCGGAGATGTTAGAATTGGTTCACGAACGCCACTACGGGACAAG CCCATCTTTCTGACCCCCGAAGTTCTCCCCGGGGGATTTGCAAATGGTCG CCTCATGGCGGGAGGTGACCTCGCCCCTTTTGAACAAGAGTTGGTCAACA AGAATGGCTGGAATTTTTCTAATCTATCCAACGAATACCGAGTCCAGTTG CAGAACTTGAGAAAGTCTTTGAACAAATACTTCTTGTCCCCGAAAGGATT GGGAGAACTATTCGACTTGCTCAAATCTGGAAAGTATCATTGCGTTTATC CAGAAGAGGCAGCACTTCTTGCTGTGCTATGGATGTTAGAACGCCGAGAT TTCGAGCTTGCACGTGGACTGGTGAGTACTATTGCACCCTACTTTGGGGA TGTACGTTTCTACCCCCACCCATCGTCGGCTCCTAAATCTCTGGACCTGA AGTGCAGCTTGCTCACTGTGGGTGCTTTCAAGCGTGGAGTTTCAGACATG CGAGTGTCGCACGGTAGCCTTTCGTATGCCATAAACAAGCTAATTGTGGA GGACTGCGCTCCGAGCTATGACAGGCTCGTATCGCTGATACTAGCCACAT GTAAGAAGGGAGCTTTTGACTTGATACCCTTCGAAGCTCGTCCTTCGAAC AAAATGGTCGCTGCATTTAAGATCCTGTTCCGGCGCTTCGAGAACGTCCA GAGAATGTATGAATCTTTCCTTCATCTAGCCAAGCGTCCAAAAAAAGAAC TGCGGCAGCTTGGAGAATCGCGGAATTGCGGAAAACTGCTGAGGTTCTCA AAGGCCTTTGTCGAAAGAAAGACAAAACGTATAACTCGAATTGAAAGGAG TGAAGCGCAGAGGATAATCATTCAAATACGTGACAGGTCAAGGCGCGGAC TGCCTTCGGTTTGGACACCGGGCCAGGACTTCAGTAACGCGGAAACTAGG TTGGATGAACTTCCCCGTAAGCTGAAAATTTTCAGGGAGCGCCAAAGAAA GACTACATTAGCAGAACACCAACTGGTTTCACATGACTGGAAGGAACTTT CCTTGAATCGCGTTACTAAACCAAGTGTAGACGATCAAACTGGGATTGAT GATGTTGGGCCAATGACCCAACCTGTTACCAGAAGAGAGGCAGAACGTCA CGGGTTTACGCGTGGTACAGCCATACCCCCCTTGATTTGTCGCATGGTAA GAATGCTTGAGAGACAACCTCTGAAAGCGATGTTTGAAAGAGAACTGGTG CCATCTATGGAAGTTTTGGCTATCCTGGTAGATCAAATCTTAGGGGCGGC ACAGGCTCAAACCCAAGGACCCATCGAAACGAGAAGACTTTATGCCTCGC TTTTAGGAGCTTTTCGTAATCGCCGATCTCTACTCCTCTTTGATTATGAA TCTCAAGTCAAGTTTGAAGAACTGCCTTGGGTTCATCGCCTGGAGGAGGT TCGAAGAGAGCACGACGATGCAGACGATCGCGACAAATCTCAACTATTAT GTGAGATGGTTAAATTATGTATATCAAAGTGGCCTGACGTAATGATTCCG AATAAGATGATCACCGCTCTAGATCATATGGCCAGAGGTTTTTCAATATC TACTGCTGATGGCCCTTGGATAGGACTCCTCCCAGAGTTGGCAGCAGATA TATTCATGGGTGGATTCACCCCAAAATGGTGCTTGCATGCCGCTTTGGCG AGGAAATTGCTGGCATCATCGCTTTACGCGAAGTACTACGGCACTGAACT TCGTAAATCTCTTTGGGATGGGATGGATCAAATACAGGTCGATGCTCGTC ATAAATGTCGTCAATTCACGTCGTTGTGTACAAAACGGGGCGAGAAACAA AAAATGCAGGGGTACGTAGCCCGAAACCGAGCTGTTATCGAGGAATCTAT GATACTCACGGGTCAAAACTACCCATACCTCCTTGAAGTGCTGGATTATC ATGGGAAAGGGTTTGATAGCAAAGAGCTCTTAGAGATCTGTGTGAAGTGC TTCCAAAATTTGAAGCAAACGATGATCCCAGCTTTGGCCGATAAGACTCC CTGGCAAACACGCACGCGAATAACTAAAAATGTCGCTTACGGTTGGCGTC AACTTGTTATTCTGGTTTCATCAATGGACACTAAGGACGTGGAGCATTTC TTTCGACAGACTATAAGCCTGGAGGAGGCTGTTGGTGGCTGCACTCTGCA ACGGGCTCTGGTGGATCTAAGAGCGGTATGGATGGCTATGCAAAACGAAG CCTGGACGGGACGTCCATGGAAGCCTCTTCGTGGGTGGCACAGCGGCCAG CACAGTCTCTGGGACAAGTTGTGGTGTGAACGACTGAGGAACAGGGCAGG CTCTCGTCATGACAGCCATGTCCGCAGTGGAGATTTGACGCTGTTAAGGG TATGA back to top
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