Ggra2159.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2159.t1
Unique NameGgra2159.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length270
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:468569..469378 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2159Ggra2159Gracilaria gracilis GNS1m malegenetig00000900_pilon 468569..469378 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2159.t1.start1Ggra2159.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000900_pilon 468569..468571 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2159.t1.CDS1Ggra2159.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000900_pilon 468569..469378 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2159.t1.exon1Ggra2159.t1.exon1Gracilaria gracilis GNS1m maleexontig00000900_pilon 468569..469378 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2159.t1.stop1Ggra2159.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000900_pilon 469376..469378 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2159.t1Ggra2159.t1Gracilaria gracilis GNS1m malepolypeptidetig00000900_pilon 468569..469378 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2159.t1 ID=Ggra2159.t1|Name=Ggra2159.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=270bp
MSTFRITALSLRAASVAGFRRNVTESLAVQKRLRPSARGLYPRYCAAQPA
PSRSSSPVETRRSEPQSTQVPNKKEVPNKKEVEEKVVEKGTESETDSSQK
VPDIPSTSWTSLGFEPEDANDPNRWKKFAWKYVGAVLLFFVSYKTLHWYV
DRMEEEGKQRKKSLEESREFSNELKNSESNSLGASSMFQNAVEQNADLKR
MMESLPEGGIQTSSELDELYRYRDELDARLRELRKQGRTPEIDAEKKEVK
LELKSLANEISLLETKNKS*
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spliced messenger RNA

>Ggra2159.t1 ID=Ggra2159.t1|Name=Ggra2159.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=810bp|location=Sequence derived from alignment at tig00000900_pilon:468569..469378+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGTACTTTTCGCATTACGGCCCTCAGTTTAAGAGCAGCCTCGGTCGC
TGGTTTTCGTCGGAACGTCACGGAATCACTCGCTGTCCAAAAGAGATTGC
GGCCGTCAGCACGGGGTTTGTATCCTCGATATTGTGCTGCGCAGCCCGCT
CCATCACGGTCTTCATCGCCGGTTGAAACACGACGATCCGAGCCCCAGTC
TACACAGGTTCCTAACAAGAAAGAGGTTCCTAACAAGAAAGAAGTAGAGG
AAAAGGTGGTCGAAAAAGGAACGGAATCTGAAACAGACTCTTCTCAAAAA
GTCCCGGATATTCCTTCAACTTCATGGACTTCTCTTGGATTCGAACCAGA
GGATGCAAATGATCCTAACAGGTGGAAGAAGTTTGCATGGAAGTATGTAG
GGGCTGTGCTATTGTTCTTTGTTTCGTATAAGACTTTGCACTGGTATGTT
GATAGAATGGAGGAAGAAGGAAAACAGCGCAAAAAGAGCCTGGAAGAATC
GCGAGAGTTTTCAAATGAGCTGAAGAACAGTGAAAGCAATTCCTTAGGCG
CATCTTCGATGTTCCAAAACGCCGTCGAGCAGAATGCAGATTTGAAACGA
ATGATGGAATCATTACCAGAAGGCGGGATCCAGACATCGTCAGAACTTGA
TGAGCTGTACAGATACCGTGATGAACTTGACGCTAGACTTCGGGAATTGC
GGAAGCAAGGACGAACACCGGAAATAGATGCCGAGAAGAAAGAAGTTAAA
CTGGAGCTGAAGTCTCTTGCTAATGAGATCAGTTTGCTTGAAACGAAGAA
CAAGTCGTAA
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protein sequence of Ggra2159.t1

>Ggra2159.t1 ID=Ggra2159.t1|Name=Ggra2159.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=270bp
MSTFRITALSLRAASVAGFRRNVTESLAVQKRLRPSARGLYPRYCAAQPA
PSRSSSPVETRRSEPQSTQVPNKKEVPNKKEVEEKVVEKGTESETDSSQK
VPDIPSTSWTSLGFEPEDANDPNRWKKFAWKYVGAVLLFFVSYKTLHWYV
DRMEEEGKQRKKSLEESREFSNELKNSESNSLGASSMFQNAVEQNADLKR
MMESLPEGGIQTSSELDELYRYRDELDARLRELRKQGRTPEIDAEKKEVK
LELKSLANEISLLETKNKS*
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mRNA from alignment at tig00000900_pilon:468569..469378+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2159.t1 ID=Ggra2159.t1|Name=Ggra2159.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=810bp|location=Sequence derived from alignment at tig00000900_pilon:468569..469378+ (Gracilaria gracilis GNS1m male)
ATGAGTACTTTTCGCATTACGGCCCTCAGTTTAAGAGCAGCCTCGGTCGC
TGGTTTTCGTCGGAACGTCACGGAATCACTCGCTGTCCAAAAGAGATTGC
GGCCGTCAGCACGGGGTTTGTATCCTCGATATTGTGCTGCGCAGCCCGCT
CCATCACGGTCTTCATCGCCGGTTGAAACACGACGATCCGAGCCCCAGTC
TACACAGGTTCCTAACAAGAAAGAGGTTCCTAACAAGAAAGAAGTAGAGG
AAAAGGTGGTCGAAAAAGGAACGGAATCTGAAACAGACTCTTCTCAAAAA
GTCCCGGATATTCCTTCAACTTCATGGACTTCTCTTGGATTCGAACCAGA
GGATGCAAATGATCCTAACAGGTGGAAGAAGTTTGCATGGAAGTATGTAG
GGGCTGTGCTATTGTTCTTTGTTTCGTATAAGACTTTGCACTGGTATGTT
GATAGAATGGAGGAAGAAGGAAAACAGCGCAAAAAGAGCCTGGAAGAATC
GCGAGAGTTTTCAAATGAGCTGAAGAACAGTGAAAGCAATTCCTTAGGCG
CATCTTCGATGTTCCAAAACGCCGTCGAGCAGAATGCAGATTTGAAACGA
ATGATGGAATCATTACCAGAAGGCGGGATCCAGACATCGTCAGAACTTGA
TGAGCTGTACAGATACCGTGATGAACTTGACGCTAGACTTCGGGAATTGC
GGAAGCAAGGACGAACACCGGAAATAGATGCCGAGAAGAAAGAAGTTAAA
CTGGAGCTGAAGTCTCTTGCTAATGAGATCAGTTTGCTTGAAACGAAGAA
CAAGTCGTAA
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Coding sequence (CDS) from alignment at tig00000900_pilon:468569..469378+

>Ggra2159.t1 ID=Ggra2159.t1|Name=Ggra2159.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=810bp|location=Sequence derived from alignment at tig00000900_pilon:468569..469378+ (Gracilaria gracilis GNS1m male)
ATGAGTACTTTTCGCATTACGGCCCTCAGTTTAAGAGCAGCCTCGGTCGC
TGGTTTTCGTCGGAACGTCACGGAATCACTCGCTGTCCAAAAGAGATTGC
GGCCGTCAGCACGGGGTTTGTATCCTCGATATTGTGCTGCGCAGCCCGCT
CCATCACGGTCTTCATCGCCGGTTGAAACACGACGATCCGAGCCCCAGTC
TACACAGGTTCCTAACAAGAAAGAGGTTCCTAACAAGAAAGAAGTAGAGG
AAAAGGTGGTCGAAAAAGGAACGGAATCTGAAACAGACTCTTCTCAAAAA
GTCCCGGATATTCCTTCAACTTCATGGACTTCTCTTGGATTCGAACCAGA
GGATGCAAATGATCCTAACAGGTGGAAGAAGTTTGCATGGAAGTATGTAG
GGGCTGTGCTATTGTTCTTTGTTTCGTATAAGACTTTGCACTGGTATGTT
GATAGAATGGAGGAAGAAGGAAAACAGCGCAAAAAGAGCCTGGAAGAATC
GCGAGAGTTTTCAAATGAGCTGAAGAACAGTGAAAGCAATTCCTTAGGCG
CATCTTCGATGTTCCAAAACGCCGTCGAGCAGAATGCAGATTTGAAACGA
ATGATGGAATCATTACCAGAAGGCGGGATCCAGACATCGTCAGAACTTGA
TGAGCTGTACAGATACCGTGATGAACTTGACGCTAGACTTCGGGAATTGC
GGAAGCAAGGACGAACACCGGAAATAGATGCCGAGAAGAAAGAAGTTAAA
CTGGAGCTGAAGTCTCTTGCTAATGAGATCAGTTTGCTTGAAACGAAGAA
CAAGTCGTAA
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