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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra2088.t1.stop1 | Ggra2088.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000900_pilon 236143..236145 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra2088.t1.start1 | Ggra2088.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000900_pilon 238681..238683 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra2088.t1 ID=Ggra2088.t1|Name=Ggra2088.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=847bp MSTKPTTARDADAHDFLTTFASVLHVQPTEGTGSTVAASPSARRKRRRRL RPISLTASPASERSPQTNGFAQQTANTSLQREPHEDGRLGVKEKRLSTPT SALRGRAVSGESPFLRPVQSAAVESKREAHSVAALKGTVEADGENTPVKE RVKEESVQLSHTLKEGAVIHATHIRAVADEGTLFLEALQSLHQLSCASFP NDVQHRAASPIHHASASVRAAYCQAVLAELRPILRTFPIPIQRALKKTAH EGHFPHPGTRSWVAPHPPRVSFRLLQEECSDVKPMSNRLNHNLEIAWDAL LDMLRTYCGHKKEAAGSFSEEKLQSFMCSLHPCNMDIFASRFVNLLSTYT INAQQPTHIRLLDERLNALSTSSNAANHTGVTLHRIPPCVLVAFDDVPAH KFFARFLTSVDSARLNAAFLPRFLARVLQALNKVSAVGSNHEFCDAVLEA RLYARFLAVVMHTMNWSHSPFVISGSSSSPESLPRQNRESGKEKVTDSGK PQVQKPQVQTKENEQASQIGDNEKGASSGKQSSWKKTQQHTSQPLRPDET PGLGSHALQWRACHLSALWQSVININELITSAVSSKQTTAVVAAAAVADV LLRFGAIDPVAKSSTWFQNGLSAMKKLRIIDQTGELHMPLVQFLKTDLLT CDQIDAKDVEWRRGQPFDDKYVLQCDANEWSTIGNMRLLQECCTSLARFR KNLAESSDTKLQKTASRRITPQMKGTTDSPSPLHDRFAPGTNGMSKKGGQ EGQEGQEDCIDQDTQERFRREFLSRLDSRLLELMQIVMSSRPNSEEDARK KYSRVAKTLYSDVPVTVRAVAAHICGHQVQSRLKSEQKRTASNVNQ* back to topspliced messenger RNA >Ggra2088.t1 ID=Ggra2088.t1|Name=Ggra2088.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2541bp|location=Sequence derived from alignment at tig00000900_pilon:236143..238683- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGAGCACTAAGCCCACCACCGCTCGCGACGCCGACGCGCACGACTTCCT CACCACGTTCGCGTCCGTGTTGCATGTACAACCTACCGAAGGTACCGGCT CCACAGTCGCTGCATCGCCATCTGCGCGACGAAAGCGACGTCGTCGACTA CGCCCCATCTCGCTCACAGCCTCGCCTGCGAGCGAGCGCTCACCGCAGAC AAATGGATTTGCGCAGCAGACAGCAAACACCTCTCTGCAGCGTGAGCCGC ACGAAGACGGCCGGCTGGGTGTGAAAGAGAAGCGGCTGTCGACGCCGACG TCTGCGCTGCGCGGGCGCGCGGTGAGCGGGGAGAGCCCGTTTCTGCGGCC AGTGCAGAGCGCGGCTGTCGAATCTAAGCGGGAGGCGCATTCTGTCGCGG CGTTGAAAGGGACCGTCGAGGCTGATGGTGAAAATACGCCTGTCAAGGAA CGCGTGAAGGAAGAAAGCGTGCAGTTATCTCATACTCTCAAGGAAGGGGC TGTTATTCATGCTACGCACATTCGCGCTGTTGCGGACGAGGGCACTTTGT TTCTAGAAGCGTTACAGTCTCTTCATCAACTTTCGTGCGCTTCTTTCCCG AATGACGTTCAACATCGCGCTGCAAGCCCGATTCATCACGCCTCTGCTTC TGTAAGAGCGGCGTATTGTCAAGCTGTTCTGGCGGAGCTTCGTCCGATCC TGCGTACATTTCCAATCCCGATACAACGCGCTCTCAAAAAGACCGCGCAT GAAGGCCACTTTCCACACCCTGGTACGCGAAGCTGGGTAGCGCCTCATCC ACCCCGCGTATCTTTTCGTCTTCTACAAGAGGAGTGCAGCGATGTAAAGC CCATGTCCAACCGCCTCAACCATAATTTGGAAATAGCCTGGGACGCTCTC TTAGACATGTTGCGCACATACTGCGGACACAAAAAGGAGGCCGCTGGTTC CTTCAGTGAAGAAAAGCTACAAAGTTTTATGTGCTCTCTTCACCCCTGTA ACATGGATATCTTCGCCTCCAGATTCGTGAATTTGTTAAGTACCTACACC ATCAACGCACAGCAGCCTACTCATATCCGCTTACTTGACGAACGTCTTAA TGCACTGTCTACCTCCTCGAATGCTGCCAATCACACCGGTGTCACGCTTC ATCGCATTCCACCATGTGTGCTTGTAGCATTTGACGACGTTCCGGCTCAT AAATTCTTCGCTCGATTCTTGACTTCCGTTGATTCGGCACGATTGAACGC GGCGTTTCTTCCAAGGTTCCTTGCACGTGTGTTACAGGCTTTGAACAAAG TTTCTGCTGTGGGTTCGAATCATGAATTTTGTGATGCAGTGCTTGAGGCT CGTCTGTACGCTCGCTTTCTTGCTGTTGTGATGCACACGATGAATTGGTC GCATTCACCGTTTGTCATATCGGGTTCGTCGTCGTCGCCTGAATCTTTGC CTCGGCAGAATAGGGAATCGGGAAAGGAAAAGGTGACTGATTCGGGCAAA CCACAAGTACAAAAACCTCAAGTGCAAACAAAAGAAAACGAACAAGCTTC GCAAATTGGAGACAATGAAAAAGGAGCATCAAGTGGGAAACAGAGTTCAT GGAAGAAGACGCAGCAACACACCTCTCAACCCCTACGACCTGATGAAACT CCTGGTTTGGGTTCCCATGCACTGCAATGGCGCGCTTGCCATCTATCCGC CTTGTGGCAAAGCGTTATCAATATCAACGAGCTAATCACCAGCGCCGTTT CATCGAAACAAACAACGGCAGTAGTAGCAGCTGCCGCTGTGGCCGATGTG CTGCTCAGGTTCGGCGCAATAGATCCTGTGGCAAAGTCGAGCACGTGGTT TCAAAACGGCCTTTCTGCGATGAAAAAGCTTCGTATCATCGATCAAACAG GTGAGCTCCATATGCCATTGGTTCAGTTCTTGAAGACAGATCTGCTGACA TGTGATCAGATCGATGCAAAGGACGTGGAATGGCGACGCGGTCAGCCGTT TGATGACAAGTATGTGCTGCAATGTGACGCGAATGAGTGGTCGACCATCG GGAACATGAGATTGTTGCAGGAATGTTGCACATCACTGGCTCGGTTCCGC AAAAATCTGGCGGAAAGTAGTGACACAAAGCTGCAAAAAACAGCGTCGCG AAGAATCACACCTCAAATGAAAGGCACTACAGACTCCCCGTCTCCGTTGC ACGACCGTTTCGCACCTGGGACAAATGGTATGTCGAAGAAGGGAGGACAG GAAGGACAGGAAGGACAGGAAGATTGTATTGATCAAGATACACAAGAACG GTTCCGAAGAGAGTTCTTGTCTCGATTAGATTCAAGATTGCTTGAATTGA TGCAGATCGTCATGTCTTCGCGTCCAAACAGCGAGGAAGACGCGCGGAAG AAATACTCGAGAGTAGCTAAAACGTTGTATTCAGATGTGCCAGTAACTGT GCGAGCAGTGGCAGCACATATCTGTGGCCATCAAGTACAGTCAAGACTAA AATCAGAACAGAAAAGAACGGCTTCGAACGTGAATCAGTAG back to topprotein sequence of Ggra2088.t1 >Ggra2088.t1 ID=Ggra2088.t1|Name=Ggra2088.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=847bp
MSTKPTTARDADAHDFLTTFASVLHVQPTEGTGSTVAASPSARRKRRRRL RPISLTASPASERSPQTNGFAQQTANTSLQREPHEDGRLGVKEKRLSTPT SALRGRAVSGESPFLRPVQSAAVESKREAHSVAALKGTVEADGENTPVKE RVKEESVQLSHTLKEGAVIHATHIRAVADEGTLFLEALQSLHQLSCASFP NDVQHRAASPIHHASASVRAAYCQAVLAELRPILRTFPIPIQRALKKTAH EGHFPHPGTRSWVAPHPPRVSFRLLQEECSDVKPMSNRLNHNLEIAWDAL LDMLRTYCGHKKEAAGSFSEEKLQSFMCSLHPCNMDIFASRFVNLLSTYT INAQQPTHIRLLDERLNALSTSSNAANHTGVTLHRIPPCVLVAFDDVPAH KFFARFLTSVDSARLNAAFLPRFLARVLQALNKVSAVGSNHEFCDAVLEA RLYARFLAVVMHTMNWSHSPFVISGSSSSPESLPRQNRESGKEKVTDSGK PQVQKPQVQTKENEQASQIGDNEKGASSGKQSSWKKTQQHTSQPLRPDET PGLGSHALQWRACHLSALWQSVININELITSAVSSKQTTAVVAAAAVADV LLRFGAIDPVAKSSTWFQNGLSAMKKLRIIDQTGELHMPLVQFLKTDLLT CDQIDAKDVEWRRGQPFDDKYVLQCDANEWSTIGNMRLLQECCTSLARFR KNLAESSDTKLQKTASRRITPQMKGTTDSPSPLHDRFAPGTNGMSKKGGQ EGQEGQEDCIDQDTQERFRREFLSRLDSRLLELMQIVMSSRPNSEEDARK KYSRVAKTLYSDVPVTVRAVAAHICGHQVQSRLKSEQKRTASNVNQ* back to topmRNA from alignment at tig00000900_pilon:236143..238683- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra2088.t1 ID=Ggra2088.t1|Name=Ggra2088.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2541bp|location=Sequence derived from alignment at tig00000900_pilon:236143..238683- (Gracilaria gracilis GNS1m male) ATGAGCACTAAGCCCACCACCGCTCGCGACGCCGACGCGCACGACTTCCT
CACCACGTTCGCGTCCGTGTTGCATGTACAACCTACCGAAGGTACCGGCT
CCACAGTCGCTGCATCGCCATCTGCGCGACGAAAGCGACGTCGTCGACTA
CGCCCCATCTCGCTCACAGCCTCGCCTGCGAGCGAGCGCTCACCGCAGAC
AAATGGATTTGCGCAGCAGACAGCAAACACCTCTCTGCAGCGTGAGCCGC
ACGAAGACGGCCGGCTGGGTGTGAAAGAGAAGCGGCTGTCGACGCCGACG
TCTGCGCTGCGCGGGCGCGCGGTGAGCGGGGAGAGCCCGTTTCTGCGGCC
AGTGCAGAGCGCGGCTGTCGAATCTAAGCGGGAGGCGCATTCTGTCGCGG
CGTTGAAAGGGACCGTCGAGGCTGATGGTGAAAATACGCCTGTCAAGGAA
CGCGTGAAGGAAGAAAGCGTGCAGTTATCTCATACTCTCAAGGAAGGGGC
TGTTATTCATGCTACGCACATTCGCGCTGTTGCGGACGAGGGCACTTTGT
TTCTAGAAGCGTTACAGTCTCTTCATCAACTTTCGTGCGCTTCTTTCCCG
AATGACGTTCAACATCGCGCTGCAAGCCCGATTCATCACGCCTCTGCTTC
TGTAAGAGCGGCGTATTGTCAAGCTGTTCTGGCGGAGCTTCGTCCGATCC
TGCGTACATTTCCAATCCCGATACAACGCGCTCTCAAAAAGACCGCGCAT
GAAGGCCACTTTCCACACCCTGGTACGCGAAGCTGGGTAGCGCCTCATCC
ACCCCGCGTATCTTTTCGTCTTCTACAAGAGGAGTGCAGCGATGTAAAGC
CCATGTCCAACCGCCTCAACCATAATTTGGAAATAGCCTGGGACGCTCTC
TTAGACATGTTGCGCACATACTGCGGACACAAAAAGGAGGCCGCTGGTTC
CTTCAGTGAAGAAAAGCTACAAAGTTTTATGTGCTCTCTTCACCCCTGTA
ACATGGATATCTTCGCCTCCAGATTCGTGAATTTGTTAAGTACCTACACC
ATCAACGCACAGCAGCCTACTCATATCCGCTTACTTGACGAACGTCTTAA
TGCACTGTCTACCTCCTCGAATGCTGCCAATCACACCGGTGTCACGCTTC
ATCGCATTCCACCATGTGTGCTTGTAGCATTTGACGACGTTCCGGCTCAT
AAATTCTTCGCTCGATTCTTGACTTCCGTTGATTCGGCACGATTGAACGC
GGCGTTTCTTCCAAGGTTCCTTGCACGTGTGTTACAGGCTTTGAACAAAG
TTTCTGCTGTGGGTTCGAATCATGAATTTTGTGATGCAGTGCTTGAGGCT
CGTCTGTACGCTCGCTTTCTTGCTGTTGTGATGCACACGATGAATTGGTC
GCATTCACCGTTTGTCATATCGGGTTCGTCGTCGTCGCCTGAATCTTTGC
CTCGGCAGAATAGGGAATCGGGAAAGGAAAAGGTGACTGATTCGGGCAAA
CCACAAGTACAAAAACCTCAAGTGCAAACAAAAGAAAACGAACAAGCTTC
GCAAATTGGAGACAATGAAAAAGGAGCATCAAGTGGGAAACAGAGTTCAT
GGAAGAAGACGCAGCAACACACCTCTCAACCCCTACGACCTGATGAAACT
CCTGGTTTGGGTTCCCATGCACTGCAATGGCGCGCTTGCCATCTATCCGC
CTTGTGGCAAAGCGTTATCAATATCAACGAGCTAATCACCAGCGCCGTTT
CATCGAAACAAACAACGGCAGTAGTAGCAGCTGCCGCTGTGGCCGATGTG
CTGCTCAGGTTCGGCGCAATAGATCCTGTGGCAAAGTCGAGCACGTGGTT
TCAAAACGGCCTTTCTGCGATGAAAAAGCTTCGTATCATCGATCAAACAG
GTGAGCTCCATATGCCATTGGTTCAGTTCTTGAAGACAGATCTGCTGACA
TGTGATCAGATCGATGCAAAGGACGTGGAATGGCGACGCGGTCAGCCGTT
TGATGACAAGTATGTGCTGCAATGTGACGCGAATGAGTGGTCGACCATCG
GGAACATGAGATTGTTGCAGGAATGTTGCACATCACTGGCTCGGTTCCGC
AAAAATCTGGCGGAAAGTAGTGACACAAAGCTGCAAAAAACAGCGTCGCG
AAGAATCACACCTCAAATGAAAGGCACTACAGACTCCCCGTCTCCGTTGC
ACGACCGTTTCGCACCTGGGACAAATGGTATGTCGAAGAAGGGAGGACAG
GAAGGACAGGAAGGACAGGAAGATTGTATTGATCAAGATACACAAGAACG
GTTCCGAAGAGAGTTCTTGTCTCGATTAGATTCAAGATTGCTTGAATTGA
TGCAGATCGTCATGTCTTCGCGTCCAAACAGCGAGGAAGACGCGCGGAAG
AAATACTCGAGAGTAGCTAAAACGTTGTATTCAGATGTGCCAGTAACTGT
GCGAGCAGTGGCAGCACATATCTGTGGCCATCAAGTACAGTCAAGACTAA
AATCAGAACAGAAAAGAACGGCTTCGAACGTGAATCAGTAG back to topCoding sequence (CDS) from alignment at tig00000900_pilon:236143..238683- >Ggra2088.t1 ID=Ggra2088.t1|Name=Ggra2088.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2541bp|location=Sequence derived from alignment at tig00000900_pilon:236143..238683- (Gracilaria gracilis GNS1m male) ATGAGCACTAAGCCCACCACCGCTCGCGACGCCGACGCGCACGACTTCCT CACCACGTTCGCGTCCGTGTTGCATGTACAACCTACCGAAGGTACCGGCT CCACAGTCGCTGCATCGCCATCTGCGCGACGAAAGCGACGTCGTCGACTA CGCCCCATCTCGCTCACAGCCTCGCCTGCGAGCGAGCGCTCACCGCAGAC AAATGGATTTGCGCAGCAGACAGCAAACACCTCTCTGCAGCGTGAGCCGC ACGAAGACGGCCGGCTGGGTGTGAAAGAGAAGCGGCTGTCGACGCCGACG TCTGCGCTGCGCGGGCGCGCGGTGAGCGGGGAGAGCCCGTTTCTGCGGCC AGTGCAGAGCGCGGCTGTCGAATCTAAGCGGGAGGCGCATTCTGTCGCGG CGTTGAAAGGGACCGTCGAGGCTGATGGTGAAAATACGCCTGTCAAGGAA CGCGTGAAGGAAGAAAGCGTGCAGTTATCTCATACTCTCAAGGAAGGGGC TGTTATTCATGCTACGCACATTCGCGCTGTTGCGGACGAGGGCACTTTGT TTCTAGAAGCGTTACAGTCTCTTCATCAACTTTCGTGCGCTTCTTTCCCG AATGACGTTCAACATCGCGCTGCAAGCCCGATTCATCACGCCTCTGCTTC TGTAAGAGCGGCGTATTGTCAAGCTGTTCTGGCGGAGCTTCGTCCGATCC TGCGTACATTTCCAATCCCGATACAACGCGCTCTCAAAAAGACCGCGCAT GAAGGCCACTTTCCACACCCTGGTACGCGAAGCTGGGTAGCGCCTCATCC ACCCCGCGTATCTTTTCGTCTTCTACAAGAGGAGTGCAGCGATGTAAAGC CCATGTCCAACCGCCTCAACCATAATTTGGAAATAGCCTGGGACGCTCTC TTAGACATGTTGCGCACATACTGCGGACACAAAAAGGAGGCCGCTGGTTC CTTCAGTGAAGAAAAGCTACAAAGTTTTATGTGCTCTCTTCACCCCTGTA ACATGGATATCTTCGCCTCCAGATTCGTGAATTTGTTAAGTACCTACACC ATCAACGCACAGCAGCCTACTCATATCCGCTTACTTGACGAACGTCTTAA TGCACTGTCTACCTCCTCGAATGCTGCCAATCACACCGGTGTCACGCTTC ATCGCATTCCACCATGTGTGCTTGTAGCATTTGACGACGTTCCGGCTCAT AAATTCTTCGCTCGATTCTTGACTTCCGTTGATTCGGCACGATTGAACGC GGCGTTTCTTCCAAGGTTCCTTGCACGTGTGTTACAGGCTTTGAACAAAG TTTCTGCTGTGGGTTCGAATCATGAATTTTGTGATGCAGTGCTTGAGGCT CGTCTGTACGCTCGCTTTCTTGCTGTTGTGATGCACACGATGAATTGGTC GCATTCACCGTTTGTCATATCGGGTTCGTCGTCGTCGCCTGAATCTTTGC CTCGGCAGAATAGGGAATCGGGAAAGGAAAAGGTGACTGATTCGGGCAAA CCACAAGTACAAAAACCTCAAGTGCAAACAAAAGAAAACGAACAAGCTTC GCAAATTGGAGACAATGAAAAAGGAGCATCAAGTGGGAAACAGAGTTCAT GGAAGAAGACGCAGCAACACACCTCTCAACCCCTACGACCTGATGAAACT CCTGGTTTGGGTTCCCATGCACTGCAATGGCGCGCTTGCCATCTATCCGC CTTGTGGCAAAGCGTTATCAATATCAACGAGCTAATCACCAGCGCCGTTT CATCGAAACAAACAACGGCAGTAGTAGCAGCTGCCGCTGTGGCCGATGTG CTGCTCAGGTTCGGCGCAATAGATCCTGTGGCAAAGTCGAGCACGTGGTT TCAAAACGGCCTTTCTGCGATGAAAAAGCTTCGTATCATCGATCAAACAG GTGAGCTCCATATGCCATTGGTTCAGTTCTTGAAGACAGATCTGCTGACA TGTGATCAGATCGATGCAAAGGACGTGGAATGGCGACGCGGTCAGCCGTT TGATGACAAGTATGTGCTGCAATGTGACGCGAATGAGTGGTCGACCATCG GGAACATGAGATTGTTGCAGGAATGTTGCACATCACTGGCTCGGTTCCGC AAAAATCTGGCGGAAAGTAGTGACACAAAGCTGCAAAAAACAGCGTCGCG AAGAATCACACCTCAAATGAAAGGCACTACAGACTCCCCGTCTCCGTTGC ACGACCGTTTCGCACCTGGGACAAATGGTATGTCGAAGAAGGGAGGACAG GAAGGACAGGAAGGACAGGAAGATTGTATTGATCAAGATACACAAGAACG GTTCCGAAGAGAGTTCTTGTCTCGATTAGATTCAAGATTGCTTGAATTGA TGCAGATCGTCATGTCTTCGCGTCCAAACAGCGAGGAAGACGCGCGGAAG AAATACTCGAGAGTAGCTAAAACGTTGTATTCAGATGTGCCAGTAACTGT GCGAGCAGTGGCAGCACATATCTGTGGCCATCAAGTACAGTCAAGACTAA AATCAGAACAGAAAAGAACGGCTTCGAACGTGAATCAGTAG back to top
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