Ggra2081.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2081.t1
Unique NameGgra2081.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length325
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:131653..132627 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2081Ggra2081Gracilaria gracilis GNS1m malegenetig00000900_pilon 131653..132627 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2081.t1.start1Ggra2081.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000900_pilon 131653..131655 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2081.t1.CDS1Ggra2081.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000900_pilon 131653..132627 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2081.t1.exon1Ggra2081.t1.exon1Gracilaria gracilis GNS1m maleexontig00000900_pilon 131653..132627 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2081.t1.stop1Ggra2081.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000900_pilon 132625..132627 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2081.t1Ggra2081.t1Gracilaria gracilis GNS1m malepolypeptidetig00000900_pilon 131653..132627 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2081.t1 ID=Ggra2081.t1|Name=Ggra2081.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=325bp
MVVHRNNSGVQEKGSYALACVGGAYPSKAKYVFEQAGALDVVIQALSAVE
RENTNDAVTKQACAALGAMCSSCPSNAQYAAKKDALQYLITAFERFRRAS
RVDGGKRGEMRLVCKAFMDLLCHPENRKLAGSNGGSTMIIRAMRIFRLDS
DFIEKALTMLSDFCTYRSNGMQIVQAGGVDDIVAAMERFRLSETMQKEGS
RVLTLLMKATGDQARRRMVHAGGAEAVVFALERFGAIPDNSVPVVVETCR
ALHMLFLMENHSEGDILGKRMKKVRCDKAIKAAMVTHKGSPQVQEKGKEA
LKQLGHLKAGGGLFGRMRSGAKRR*
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spliced messenger RNA

>Ggra2081.t1 ID=Ggra2081.t1|Name=Ggra2081.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=975bp|location=Sequence derived from alignment at tig00000900_pilon:131653..132627+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTAGTACACCGTAATAACAGCGGCGTGCAGGAGAAGGGCAGCTACGC
TCTCGCTTGTGTGGGAGGAGCGTACCCTTCAAAGGCGAAGTACGTGTTTG
AGCAAGCTGGAGCTCTCGATGTTGTAATTCAAGCCTTATCGGCTGTAGAA
AGAGAAAACACGAATGACGCGGTAACAAAACAAGCCTGTGCTGCTCTTGG
TGCAATGTGCTCTTCGTGTCCATCGAATGCCCAGTACGCAGCAAAGAAAG
ACGCACTCCAGTATCTCATTACTGCGTTTGAAAGATTCCGAAGAGCATCG
AGGGTGGATGGAGGAAAACGGGGCGAGATGCGATTGGTTTGCAAGGCATT
CATGGACTTGCTGTGCCATCCAGAGAACAGAAAATTGGCCGGGTCTAACG
GTGGATCTACAATGATCATTCGGGCCATGCGAATCTTCCGGTTGGATTCC
GACTTCATTGAAAAGGCCCTCACAATGCTTTCCGATTTTTGTACATATCG
TTCAAACGGCATGCAAATCGTTCAAGCTGGAGGGGTAGATGATATCGTGG
CTGCAATGGAGCGATTCCGATTGTCTGAAACGATGCAGAAGGAGGGATCG
AGGGTGCTCACATTGTTAATGAAAGCCACCGGTGATCAAGCAAGACGGCG
AATGGTGCACGCGGGCGGAGCGGAAGCGGTGGTGTTTGCGTTGGAAAGGT
TTGGAGCCATACCAGACAACAGCGTGCCTGTTGTTGTAGAGACGTGTAGA
GCATTGCACATGTTGTTTTTGATGGAGAATCATAGTGAGGGAGATATTTT
GGGAAAGAGAATGAAGAAGGTAAGGTGTGATAAGGCGATTAAGGCAGCGA
TGGTAACACACAAAGGAAGCCCTCAGGTGCAAGAGAAGGGGAAGGAAGCC
CTCAAACAACTGGGACACTTGAAAGCGGGTGGGGGGTTATTTGGGAGAAT
GAGAAGTGGTGCGAAGCGGCGGTAA
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protein sequence of Ggra2081.t1

>Ggra2081.t1 ID=Ggra2081.t1|Name=Ggra2081.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=325bp
MVVHRNNSGVQEKGSYALACVGGAYPSKAKYVFEQAGALDVVIQALSAVE
RENTNDAVTKQACAALGAMCSSCPSNAQYAAKKDALQYLITAFERFRRAS
RVDGGKRGEMRLVCKAFMDLLCHPENRKLAGSNGGSTMIIRAMRIFRLDS
DFIEKALTMLSDFCTYRSNGMQIVQAGGVDDIVAAMERFRLSETMQKEGS
RVLTLLMKATGDQARRRMVHAGGAEAVVFALERFGAIPDNSVPVVVETCR
ALHMLFLMENHSEGDILGKRMKKVRCDKAIKAAMVTHKGSPQVQEKGKEA
LKQLGHLKAGGGLFGRMRSGAKRR*
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mRNA from alignment at tig00000900_pilon:131653..132627+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2081.t1 ID=Ggra2081.t1|Name=Ggra2081.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=975bp|location=Sequence derived from alignment at tig00000900_pilon:131653..132627+ (Gracilaria gracilis GNS1m male)
ATGGTAGTACACCGTAATAACAGCGGCGTGCAGGAGAAGGGCAGCTACGC
TCTCGCTTGTGTGGGAGGAGCGTACCCTTCAAAGGCGAAGTACGTGTTTG
AGCAAGCTGGAGCTCTCGATGTTGTAATTCAAGCCTTATCGGCTGTAGAA
AGAGAAAACACGAATGACGCGGTAACAAAACAAGCCTGTGCTGCTCTTGG
TGCAATGTGCTCTTCGTGTCCATCGAATGCCCAGTACGCAGCAAAGAAAG
ACGCACTCCAGTATCTCATTACTGCGTTTGAAAGATTCCGAAGAGCATCG
AGGGTGGATGGAGGAAAACGGGGCGAGATGCGATTGGTTTGCAAGGCATT
CATGGACTTGCTGTGCCATCCAGAGAACAGAAAATTGGCCGGGTCTAACG
GTGGATCTACAATGATCATTCGGGCCATGCGAATCTTCCGGTTGGATTCC
GACTTCATTGAAAAGGCCCTCACAATGCTTTCCGATTTTTGTACATATCG
TTCAAACGGCATGCAAATCGTTCAAGCTGGAGGGGTAGATGATATCGTGG
CTGCAATGGAGCGATTCCGATTGTCTGAAACGATGCAGAAGGAGGGATCG
AGGGTGCTCACATTGTTAATGAAAGCCACCGGTGATCAAGCAAGACGGCG
AATGGTGCACGCGGGCGGAGCGGAAGCGGTGGTGTTTGCGTTGGAAAGGT
TTGGAGCCATACCAGACAACAGCGTGCCTGTTGTTGTAGAGACGTGTAGA
GCATTGCACATGTTGTTTTTGATGGAGAATCATAGTGAGGGAGATATTTT
GGGAAAGAGAATGAAGAAGGTAAGGTGTGATAAGGCGATTAAGGCAGCGA
TGGTAACACACAAAGGAAGCCCTCAGGTGCAAGAGAAGGGGAAGGAAGCC
CTCAAACAACTGGGACACTTGAAAGCGGGTGGGGGGTTATTTGGGAGAAT
GAGAAGTGGTGCGAAGCGGCGGTAA
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Coding sequence (CDS) from alignment at tig00000900_pilon:131653..132627+

>Ggra2081.t1 ID=Ggra2081.t1|Name=Ggra2081.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=975bp|location=Sequence derived from alignment at tig00000900_pilon:131653..132627+ (Gracilaria gracilis GNS1m male)
ATGGTAGTACACCGTAATAACAGCGGCGTGCAGGAGAAGGGCAGCTACGC
TCTCGCTTGTGTGGGAGGAGCGTACCCTTCAAAGGCGAAGTACGTGTTTG
AGCAAGCTGGAGCTCTCGATGTTGTAATTCAAGCCTTATCGGCTGTAGAA
AGAGAAAACACGAATGACGCGGTAACAAAACAAGCCTGTGCTGCTCTTGG
TGCAATGTGCTCTTCGTGTCCATCGAATGCCCAGTACGCAGCAAAGAAAG
ACGCACTCCAGTATCTCATTACTGCGTTTGAAAGATTCCGAAGAGCATCG
AGGGTGGATGGAGGAAAACGGGGCGAGATGCGATTGGTTTGCAAGGCATT
CATGGACTTGCTGTGCCATCCAGAGAACAGAAAATTGGCCGGGTCTAACG
GTGGATCTACAATGATCATTCGGGCCATGCGAATCTTCCGGTTGGATTCC
GACTTCATTGAAAAGGCCCTCACAATGCTTTCCGATTTTTGTACATATCG
TTCAAACGGCATGCAAATCGTTCAAGCTGGAGGGGTAGATGATATCGTGG
CTGCAATGGAGCGATTCCGATTGTCTGAAACGATGCAGAAGGAGGGATCG
AGGGTGCTCACATTGTTAATGAAAGCCACCGGTGATCAAGCAAGACGGCG
AATGGTGCACGCGGGCGGAGCGGAAGCGGTGGTGTTTGCGTTGGAAAGGT
TTGGAGCCATACCAGACAACAGCGTGCCTGTTGTTGTAGAGACGTGTAGA
GCATTGCACATGTTGTTTTTGATGGAGAATCATAGTGAGGGAGATATTTT
GGGAAAGAGAATGAAGAAGGTAAGGTGTGATAAGGCGATTAAGGCAGCGA
TGGTAACACACAAAGGAAGCCCTCAGGTGCAAGAGAAGGGGAAGGAAGCC
CTCAAACAACTGGGACACTTGAAAGCGGGTGGGGGGTTATTTGGGAGAAT
GAGAAGTGGTGCGAAGCGGCGGTAA
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