Ggra2069.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra2069.t1
Unique NameGgra2069.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length253
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000900_piloncontigtig00000900_pilon:55531..56289 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2069Ggra2069Gracilaria gracilis GNS1m malegenetig00000900_pilon 55531..56289 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2069.t1.start1Ggra2069.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000900_pilon 55531..55533 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2069.t1.CDS1Ggra2069.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000900_pilon 55531..56289 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2069.t1.exon1Ggra2069.t1.exon1Gracilaria gracilis GNS1m maleexontig00000900_pilon 55531..56289 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2069.t1.stop1Ggra2069.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000900_pilon 56287..56289 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra2069.t1Ggra2069.t1Gracilaria gracilis GNS1m malepolypeptidetig00000900_pilon 55531..56289 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra2069.t1 ID=Ggra2069.t1|Name=Ggra2069.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=253bp
MIIPRISMIVADQPQERAFFCLKDADSYADCTLCTTRFKSPISKESNIHD
EHPNIAHFEVNDVQPTKRDATTTVRNHLFCARNKLPGSKPTRALPNDAKQ
ILHESRTSLLEQSAHEYPPALAAFLGLGTAPFLLYMTPGFDSLHVLDLGV
YRIIPDNAGEILRQDWNYLLSATKAISVANRRILDIAPYARIHRTATFLV
NQSEKQAGINGLVRREHCPFLWYALMGILTRNPDDDKLVQTALQMATVYK
EL*
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spliced messenger RNA

>Ggra2069.t1 ID=Ggra2069.t1|Name=Ggra2069.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=759bp|location=Sequence derived from alignment at tig00000900_pilon:55531..56289+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATTATCCCGAGAATCTCTATGATTGTCGCAGATCAACCGCAAGAAAG
GGCCTTCTTTTGCTTGAAGGATGCAGACAGTTACGCAGACTGTACATTAT
GCACCACGCGTTTCAAGTCACCAATCTCTAAAGAATCAAATATCCATGAC
GAACATCCAAACATTGCTCACTTCGAAGTGAACGATGTACAACCTACCAA
ACGAGATGCGACAACAACGGTTCGCAATCATTTGTTTTGCGCTAGGAACA
AGTTACCAGGCTCAAAACCGACACGAGCATTACCCAACGACGCAAAACAG
ATTCTGCATGAGTCCAGGACCTCCCTTCTAGAACAAAGCGCGCATGAGTA
TCCGCCAGCGCTTGCCGCTTTTCTTGGTCTTGGAACCGCACCATTTCTTC
TTTACATGACACCGGGCTTTGATTCTCTCCATGTTCTAGATCTTGGAGTA
TACAGAATTATCCCAGACAATGCTGGTGAAATTCTTCGTCAGGATTGGAA
CTATTTGTTGTCCGCCACAAAAGCCATTTCTGTCGCAAACAGACGTATTC
TAGATATTGCGCCCTATGCTCGTATTCATAGAACTGCTACTTTTCTGGTC
AACCAAAGTGAAAAGCAAGCAGGCATTAATGGTCTCGTTCGTCGTGAGCA
TTGCCCATTCTTATGGTACGCGTTGATGGGCATTTTGACGAGAAACCCAG
ACGACGACAAACTTGTGCAGACCGCTCTCCAGATGGCAACAGTATACAAA
GAGCTGTAG
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protein sequence of Ggra2069.t1

>Ggra2069.t1 ID=Ggra2069.t1|Name=Ggra2069.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=253bp
MIIPRISMIVADQPQERAFFCLKDADSYADCTLCTTRFKSPISKESNIHD
EHPNIAHFEVNDVQPTKRDATTTVRNHLFCARNKLPGSKPTRALPNDAKQ
ILHESRTSLLEQSAHEYPPALAAFLGLGTAPFLLYMTPGFDSLHVLDLGV
YRIIPDNAGEILRQDWNYLLSATKAISVANRRILDIAPYARIHRTATFLV
NQSEKQAGINGLVRREHCPFLWYALMGILTRNPDDDKLVQTALQMATVYK
EL*
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mRNA from alignment at tig00000900_pilon:55531..56289+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra2069.t1 ID=Ggra2069.t1|Name=Ggra2069.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=759bp|location=Sequence derived from alignment at tig00000900_pilon:55531..56289+ (Gracilaria gracilis GNS1m male)
ATGATTATCCCGAGAATCTCTATGATTGTCGCAGATCAACCGCAAGAAAG
GGCCTTCTTTTGCTTGAAGGATGCAGACAGTTACGCAGACTGTACATTAT
GCACCACGCGTTTCAAGTCACCAATCTCTAAAGAATCAAATATCCATGAC
GAACATCCAAACATTGCTCACTTCGAAGTGAACGATGTACAACCTACCAA
ACGAGATGCGACAACAACGGTTCGCAATCATTTGTTTTGCGCTAGGAACA
AGTTACCAGGCTCAAAACCGACACGAGCATTACCCAACGACGCAAAACAG
ATTCTGCATGAGTCCAGGACCTCCCTTCTAGAACAAAGCGCGCATGAGTA
TCCGCCAGCGCTTGCCGCTTTTCTTGGTCTTGGAACCGCACCATTTCTTC
TTTACATGACACCGGGCTTTGATTCTCTCCATGTTCTAGATCTTGGAGTA
TACAGAATTATCCCAGACAATGCTGGTGAAATTCTTCGTCAGGATTGGAA
CTATTTGTTGTCCGCCACAAAAGCCATTTCTGTCGCAAACAGACGTATTC
TAGATATTGCGCCCTATGCTCGTATTCATAGAACTGCTACTTTTCTGGTC
AACCAAAGTGAAAAGCAAGCAGGCATTAATGGTCTCGTTCGTCGTGAGCA
TTGCCCATTCTTATGGTACGCGTTGATGGGCATTTTGACGAGAAACCCAG
ACGACGACAAACTTGTGCAGACCGCTCTCCAGATGGCAACAGTATACAAA
GAGCTGTAG
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Coding sequence (CDS) from alignment at tig00000900_pilon:55531..56289+

>Ggra2069.t1 ID=Ggra2069.t1|Name=Ggra2069.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=759bp|location=Sequence derived from alignment at tig00000900_pilon:55531..56289+ (Gracilaria gracilis GNS1m male)
ATGATTATCCCGAGAATCTCTATGATTGTCGCAGATCAACCGCAAGAAAG
GGCCTTCTTTTGCTTGAAGGATGCAGACAGTTACGCAGACTGTACATTAT
GCACCACGCGTTTCAAGTCACCAATCTCTAAAGAATCAAATATCCATGAC
GAACATCCAAACATTGCTCACTTCGAAGTGAACGATGTACAACCTACCAA
ACGAGATGCGACAACAACGGTTCGCAATCATTTGTTTTGCGCTAGGAACA
AGTTACCAGGCTCAAAACCGACACGAGCATTACCCAACGACGCAAAACAG
ATTCTGCATGAGTCCAGGACCTCCCTTCTAGAACAAAGCGCGCATGAGTA
TCCGCCAGCGCTTGCCGCTTTTCTTGGTCTTGGAACCGCACCATTTCTTC
TTTACATGACACCGGGCTTTGATTCTCTCCATGTTCTAGATCTTGGAGTA
TACAGAATTATCCCAGACAATGCTGGTGAAATTCTTCGTCAGGATTGGAA
CTATTTGTTGTCCGCCACAAAAGCCATTTCTGTCGCAAACAGACGTATTC
TAGATATTGCGCCCTATGCTCGTATTCATAGAACTGCTACTTTTCTGGTC
AACCAAAGTGAAAAGCAAGCAGGCATTAATGGTCTCGTTCGTCGTGAGCA
TTGCCCATTCTTATGGTACGCGTTGATGGGCATTTTGACGAGAAACCCAG
ACGACGACAAACTTGTGCAGACCGCTCTCCAGATGGCAACAGTATACAAA
GAGCTGTAG
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