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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 159749.K0RN92 |
| Preferred name | CMPK2 |
| PFAMs | Thymidylate_kin |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00002 |
| KEGG ko | ko:K13809 |
| KEGG Reaction | R00158,R00512,R01665 |
| KEGG Pathway | ko00240,ko01100,map00240,map01100 |
| KEGG Module | M00052 |
| GOs | GO:0002237,GO:0003674,GO:0003824,GO:0004127,GO:0004550,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006165,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0010033,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0032496,GO:0033862,GO:0033993,GO:0034641,GO:0034654,GO:0042221,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0055086,GO:0070887,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071396,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1901701 |
| Evalue | 4.04e-92 |
| EggNOG OGs | COG0125@1|root,KOG3327@2759|Eukaryota,2XDRK@2836|Bacillariophyta |
| EC | 2.7.4.14 |
| Description | dTDP metabolic process |
| COG category | F |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra1820.t1.start1 | Ggra1820.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000050_pilon 757919..757921 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra1820.t1.stop1 | Ggra1820.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000050_pilon 760139..760141 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra1820.t1 ID=Ggra1820.t1|Name=Ggra1820.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=741bp METGTEAETQTVKGLFSDFVTAASILYSSKKLNQLCTVDKELEREEGSLD AFFDLLNVVGYSLFRKPTNPPFVVVIEGLDGTGKTTLVKSLAKETYDIEG QQFNAHAVGTPTVSVSSVRDIFDKCGGQVSRAFYMVSNYILQHEMRIKSE KDPFAIFFVDRWYSSTCAYSIGWRNTSGGPESVDALDTSLFEWPKDLDVP NIMIVLHVDGMVRRRRIRQRGELLNHNPWDNRLTSDDNLGRRIVRAWERM SGPQKAYHLSANGSKEKVLKESQKVIRESIFRQFIPVKYFQQRPLGMFRW ISSCLGHCNGESGLRYEYKAWNYQVCIYNTDNGNVSLQNHQIQMVDDDGI LSFSTDHFEGWNMPGRNALASVAWVQGDYPKEYHWKADGIICLVTASEFI LMDTTSTPGIQVCTHACIREQPKQNHSSVENEEMALSLHRERISRTKLGI NAGKFPTRFVPLRMELRIGDVKSRGTSHSYEWVRDRKLLGNAWSFSGQRI PPQSSSDFLKQRTLLPVTLAILGTHTSGKKTLGERLAAIFGWSFHPELGD ILRDRDNIIAAGHKTGDGRAEKESVGMVWDDKIHEAECERDRATTCSRVV ETWHVGNVAWALLRQKSSAALMQNAEPLIDQAKDAIKSELKKAVVLFVHL GIDVGTSIRRRQTEENAKRIPMMNERDECTELHEALDVQGAKLLSEFTDF NIPVLHLENSEDGEQAIDKSIRQIIHFVNRNLWRKVFREG* back to topspliced messenger RNA >Ggra1820.t1 ID=Ggra1820.t1|Name=Ggra1820.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2223bp|location=Sequence derived from alignment at tig00000050_pilon:757919..760141+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGAAACAGGCACAGAAGCTGAAACTCAGACGGTAAAGGGCTTATTCAG CGACTTTGTAACCGCCGCCAGTATTCTTTACAGTAGCAAGAAGCTGAACC AACTATGTACAGTAGATAAAGAACTGGAGAGGGAAGAAGGTAGTCTAGAT GCTTTCTTCGATCTGCTGAACGTCGTCGGGTACAGTCTGTTTAGAAAGCC TACCAACCCGCCTTTTGTTGTAGTTATTGAAGGTCTTGATGGTACTGGGA AGACAACGCTTGTTAAGTCCCTCGCAAAAGAAACATATGACATAGAGGGA CAACAATTTAATGCACATGCCGTTGGAACACCTACAGTCTCCGTTTCTTC TGTTAGAGACATCTTTGACAAATGTGGTGGACAGGTATCCAGAGCGTTTT ATATGGTCAGCAACTACATCTTACAGCATGAAATGCGTATCAAGTCCGAG AAAGATCCTTTTGCAATCTTTTTTGTTGATCGATGGTATTCCTCAACTTG TGCCTACTCCATAGGATGGAGAAACACTTCCGGTGGACCGGAGTCTGTTG ATGCATTAGATACTTCTCTGTTCGAGTGGCCGAAGGATTTAGATGTTCCA AATATAATGATTGTGCTTCATGTTGACGGAATGGTGCGAAGACGGCGAAT TCGCCAGCGTGGAGAACTCTTGAACCATAATCCATGGGACAACCGTCTTA CAAGTGATGATAATCTTGGGAGGCGAATTGTGCGAGCATGGGAGCGAATG TCAGGACCTCAAAAAGCTTATCATTTATCTGCCAACGGATCTAAGGAGAA AGTTCTCAAGGAAAGCCAAAAGGTCATCAGAGAAAGCATTTTCCGTCAAT TTATACCAGTTAAGTACTTTCAGCAGAGGCCACTGGGAATGTTTCGATGG ATATCTTCATGTCTTGGGCACTGCAACGGCGAGAGTGGACTACGATACGA GTACAAGGCGTGGAACTACCAAGTCTGCATATACAATACGGACAATGGAA ATGTTTCGCTGCAGAACCACCAAATTCAAATGGTTGATGACGATGGTATT CTCTCGTTCTCGACCGACCACTTCGAAGGCTGGAATATGCCTGGCAGAAA CGCTTTAGCGTCTGTTGCATGGGTCCAAGGAGATTACCCTAAGGAGTACC ATTGGAAAGCGGACGGAATAATATGCCTGGTTACGGCATCCGAGTTTATC TTAATGGACACCACTTCAACTCCGGGTATACAGGTTTGCACCCACGCTTG CATCCGCGAGCAGCCGAAACAGAACCACAGCAGCGTAGAAAACGAGGAAA TGGCACTCTCGTTGCACCGTGAACGCATCTCGCGAACCAAACTCGGAATC AATGCCGGTAAGTTTCCCACAAGGTTTGTCCCACTGCGCATGGAGCTTCG AATAGGAGACGTGAAATCCCGAGGGACGAGCCACTCGTACGAATGGGTTC GCGACCGCAAGCTGTTGGGGAATGCGTGGTCCTTCTCGGGTCAAAGGATA CCCCCGCAATCCTCAAGCGATTTCTTGAAGCAACGGACTTTGCTACCTGT TACGCTTGCCATTCTTGGCACTCACACGTCGGGCAAGAAGACTCTTGGAG AACGCCTAGCTGCTATTTTTGGCTGGTCGTTTCACCCTGAACTTGGCGAT ATTCTACGAGACAGGGACAATATAATTGCTGCTGGGCATAAAACTGGCGA CGGTAGAGCAGAAAAGGAATCTGTAGGTATGGTATGGGATGATAAGATTC ACGAAGCGGAATGTGAACGGGACAGAGCTACAACATGTAGCCGTGTAGTG GAGACTTGGCATGTAGGGAACGTAGCCTGGGCTCTGCTTCGACAAAAATC ATCTGCAGCACTAATGCAAAATGCTGAGCCTCTCATCGACCAGGCTAAGG ACGCGATCAAGTCCGAACTGAAAAAAGCTGTCGTTCTCTTTGTTCATCTG GGAATCGATGTGGGAACGTCAATTCGCCGACGTCAGACAGAAGAGAACGC AAAACGCATACCGATGATGAACGAGCGTGACGAGTGTACAGAGCTCCACG AGGCTTTGGATGTTCAGGGTGCTAAGCTTCTTTCAGAGTTCACTGATTTC AACATTCCCGTGCTTCACCTAGAAAACTCTGAAGATGGTGAGCAAGCGAT AGATAAATCTATACGGCAAATTATTCATTTCGTGAACAGGAACTTGTGGC GCAAGGTGTTCCGGGAGGGGTAA back to topprotein sequence of Ggra1820.t1 >Ggra1820.t1 ID=Ggra1820.t1|Name=Ggra1820.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=741bp
METGTEAETQTVKGLFSDFVTAASILYSSKKLNQLCTVDKELEREEGSLD AFFDLLNVVGYSLFRKPTNPPFVVVIEGLDGTGKTTLVKSLAKETYDIEG QQFNAHAVGTPTVSVSSVRDIFDKCGGQVSRAFYMVSNYILQHEMRIKSE KDPFAIFFVDRWYSSTCAYSIGWRNTSGGPESVDALDTSLFEWPKDLDVP NIMIVLHVDGMVRRRRIRQRGELLNHNPWDNRLTSDDNLGRRIVRAWERM SGPQKAYHLSANGSKEKVLKESQKVIRESIFRQFIPVKYFQQRPLGMFRW ISSCLGHCNGESGLRYEYKAWNYQVCIYNTDNGNVSLQNHQIQMVDDDGI LSFSTDHFEGWNMPGRNALASVAWVQGDYPKEYHWKADGIICLVTASEFI LMDTTSTPGIQVCTHACIREQPKQNHSSVENEEMALSLHRERISRTKLGI NAGKFPTRFVPLRMELRIGDVKSRGTSHSYEWVRDRKLLGNAWSFSGQRI PPQSSSDFLKQRTLLPVTLAILGTHTSGKKTLGERLAAIFGWSFHPELGD ILRDRDNIIAAGHKTGDGRAEKESVGMVWDDKIHEAECERDRATTCSRVV ETWHVGNVAWALLRQKSSAALMQNAEPLIDQAKDAIKSELKKAVVLFVHL GIDVGTSIRRRQTEENAKRIPMMNERDECTELHEALDVQGAKLLSEFTDF NIPVLHLENSEDGEQAIDKSIRQIIHFVNRNLWRKVFREG* back to topmRNA from alignment at tig00000050_pilon:757919..760141+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra1820.t1 ID=Ggra1820.t1|Name=Ggra1820.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2223bp|location=Sequence derived from alignment at tig00000050_pilon:757919..760141+ (Gracilaria gracilis GNS1m male) ATGGAAACAGGCACAGAAGCTGAAACTCAGACGGTAAAGGGCTTATTCAG
CGACTTTGTAACCGCCGCCAGTATTCTTTACAGTAGCAAGAAGCTGAACC
AACTATGTACAGTAGATAAAGAACTGGAGAGGGAAGAAGGTAGTCTAGAT
GCTTTCTTCGATCTGCTGAACGTCGTCGGGTACAGTCTGTTTAGAAAGCC
TACCAACCCGCCTTTTGTTGTAGTTATTGAAGGTCTTGATGGTACTGGGA
AGACAACGCTTGTTAAGTCCCTCGCAAAAGAAACATATGACATAGAGGGA
CAACAATTTAATGCACATGCCGTTGGAACACCTACAGTCTCCGTTTCTTC
TGTTAGAGACATCTTTGACAAATGTGGTGGACAGGTATCCAGAGCGTTTT
ATATGGTCAGCAACTACATCTTACAGCATGAAATGCGTATCAAGTCCGAG
AAAGATCCTTTTGCAATCTTTTTTGTTGATCGATGGTATTCCTCAACTTG
TGCCTACTCCATAGGATGGAGAAACACTTCCGGTGGACCGGAGTCTGTTG
ATGCATTAGATACTTCTCTGTTCGAGTGGCCGAAGGATTTAGATGTTCCA
AATATAATGATTGTGCTTCATGTTGACGGAATGGTGCGAAGACGGCGAAT
TCGCCAGCGTGGAGAACTCTTGAACCATAATCCATGGGACAACCGTCTTA
CAAGTGATGATAATCTTGGGAGGCGAATTGTGCGAGCATGGGAGCGAATG
TCAGGACCTCAAAAAGCTTATCATTTATCTGCCAACGGATCTAAGGAGAA
AGTTCTCAAGGAAAGCCAAAAGGTCATCAGAGAAAGCATTTTCCGTCAAT
TTATACCAGTTAAGTACTTTCAGCAGAGGCCACTGGGAATGTTTCGATGG
ATATCTTCATGTCTTGGGCACTGCAACGGCGAGAGTGGACTACGATACGA
GTACAAGGCGTGGAACTACCAAGTCTGCATATACAATACGGACAATGGAA
ATGTTTCGCTGCAGAACCACCAAATTCAAATGGTTGATGACGATGGTATT
CTCTCGTTCTCGACCGACCACTTCGAAGGCTGGAATATGCCTGGCAGAAA
CGCTTTAGCGTCTGTTGCATGGGTCCAAGGAGATTACCCTAAGGAGTACC
ATTGGAAAGCGGACGGAATAATATGCCTGGTTACGGCATCCGAGTTTATC
TTAATGGACACCACTTCAACTCCGGGTATACAGGTTTGCACCCACGCTTG
CATCCGCGAGCAGCCGAAACAGAACCACAGCAGCGTAGAAAACGAGGAAA
TGGCACTCTCGTTGCACCGTGAACGCATCTCGCGAACCAAACTCGGAATC
AATGCCGGTAAGTTTCCCACAAGGTTTGTCCCACTGCGCATGGAGCTTCG
AATAGGAGACGTGAAATCCCGAGGGACGAGCCACTCGTACGAATGGGTTC
GCGACCGCAAGCTGTTGGGGAATGCGTGGTCCTTCTCGGGTCAAAGGATA
CCCCCGCAATCCTCAAGCGATTTCTTGAAGCAACGGACTTTGCTACCTGT
TACGCTTGCCATTCTTGGCACTCACACGTCGGGCAAGAAGACTCTTGGAG
AACGCCTAGCTGCTATTTTTGGCTGGTCGTTTCACCCTGAACTTGGCGAT
ATTCTACGAGACAGGGACAATATAATTGCTGCTGGGCATAAAACTGGCGA
CGGTAGAGCAGAAAAGGAATCTGTAGGTATGGTATGGGATGATAAGATTC
ACGAAGCGGAATGTGAACGGGACAGAGCTACAACATGTAGCCGTGTAGTG
GAGACTTGGCATGTAGGGAACGTAGCCTGGGCTCTGCTTCGACAAAAATC
ATCTGCAGCACTAATGCAAAATGCTGAGCCTCTCATCGACCAGGCTAAGG
ACGCGATCAAGTCCGAACTGAAAAAAGCTGTCGTTCTCTTTGTTCATCTG
GGAATCGATGTGGGAACGTCAATTCGCCGACGTCAGACAGAAGAGAACGC
AAAACGCATACCGATGATGAACGAGCGTGACGAGTGTACAGAGCTCCACG
AGGCTTTGGATGTTCAGGGTGCTAAGCTTCTTTCAGAGTTCACTGATTTC
AACATTCCCGTGCTTCACCTAGAAAACTCTGAAGATGGTGAGCAAGCGAT
AGATAAATCTATACGGCAAATTATTCATTTCGTGAACAGGAACTTGTGGC
GCAAGGTGTTCCGGGAGGGGTAA back to topCoding sequence (CDS) from alignment at tig00000050_pilon:757919..760141+ >Ggra1820.t1 ID=Ggra1820.t1|Name=Ggra1820.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2223bp|location=Sequence derived from alignment at tig00000050_pilon:757919..760141+ (Gracilaria gracilis GNS1m male) ATGGAAACAGGCACAGAAGCTGAAACTCAGACGGTAAAGGGCTTATTCAG CGACTTTGTAACCGCCGCCAGTATTCTTTACAGTAGCAAGAAGCTGAACC AACTATGTACAGTAGATAAAGAACTGGAGAGGGAAGAAGGTAGTCTAGAT GCTTTCTTCGATCTGCTGAACGTCGTCGGGTACAGTCTGTTTAGAAAGCC TACCAACCCGCCTTTTGTTGTAGTTATTGAAGGTCTTGATGGTACTGGGA AGACAACGCTTGTTAAGTCCCTCGCAAAAGAAACATATGACATAGAGGGA CAACAATTTAATGCACATGCCGTTGGAACACCTACAGTCTCCGTTTCTTC TGTTAGAGACATCTTTGACAAATGTGGTGGACAGGTATCCAGAGCGTTTT ATATGGTCAGCAACTACATCTTACAGCATGAAATGCGTATCAAGTCCGAG AAAGATCCTTTTGCAATCTTTTTTGTTGATCGATGGTATTCCTCAACTTG TGCCTACTCCATAGGATGGAGAAACACTTCCGGTGGACCGGAGTCTGTTG ATGCATTAGATACTTCTCTGTTCGAGTGGCCGAAGGATTTAGATGTTCCA AATATAATGATTGTGCTTCATGTTGACGGAATGGTGCGAAGACGGCGAAT TCGCCAGCGTGGAGAACTCTTGAACCATAATCCATGGGACAACCGTCTTA CAAGTGATGATAATCTTGGGAGGCGAATTGTGCGAGCATGGGAGCGAATG TCAGGACCTCAAAAAGCTTATCATTTATCTGCCAACGGATCTAAGGAGAA AGTTCTCAAGGAAAGCCAAAAGGTCATCAGAGAAAGCATTTTCCGTCAAT TTATACCAGTTAAGTACTTTCAGCAGAGGCCACTGGGAATGTTTCGATGG ATATCTTCATGTCTTGGGCACTGCAACGGCGAGAGTGGACTACGATACGA GTACAAGGCGTGGAACTACCAAGTCTGCATATACAATACGGACAATGGAA ATGTTTCGCTGCAGAACCACCAAATTCAAATGGTTGATGACGATGGTATT CTCTCGTTCTCGACCGACCACTTCGAAGGCTGGAATATGCCTGGCAGAAA CGCTTTAGCGTCTGTTGCATGGGTCCAAGGAGATTACCCTAAGGAGTACC ATTGGAAAGCGGACGGAATAATATGCCTGGTTACGGCATCCGAGTTTATC TTAATGGACACCACTTCAACTCCGGGTATACAGGTTTGCACCCACGCTTG CATCCGCGAGCAGCCGAAACAGAACCACAGCAGCGTAGAAAACGAGGAAA TGGCACTCTCGTTGCACCGTGAACGCATCTCGCGAACCAAACTCGGAATC AATGCCGGTAAGTTTCCCACAAGGTTTGTCCCACTGCGCATGGAGCTTCG AATAGGAGACGTGAAATCCCGAGGGACGAGCCACTCGTACGAATGGGTTC GCGACCGCAAGCTGTTGGGGAATGCGTGGTCCTTCTCGGGTCAAAGGATA CCCCCGCAATCCTCAAGCGATTTCTTGAAGCAACGGACTTTGCTACCTGT TACGCTTGCCATTCTTGGCACTCACACGTCGGGCAAGAAGACTCTTGGAG AACGCCTAGCTGCTATTTTTGGCTGGTCGTTTCACCCTGAACTTGGCGAT ATTCTACGAGACAGGGACAATATAATTGCTGCTGGGCATAAAACTGGCGA CGGTAGAGCAGAAAAGGAATCTGTAGGTATGGTATGGGATGATAAGATTC ACGAAGCGGAATGTGAACGGGACAGAGCTACAACATGTAGCCGTGTAGTG GAGACTTGGCATGTAGGGAACGTAGCCTGGGCTCTGCTTCGACAAAAATC ATCTGCAGCACTAATGCAAAATGCTGAGCCTCTCATCGACCAGGCTAAGG ACGCGATCAAGTCCGAACTGAAAAAAGCTGTCGTTCTCTTTGTTCATCTG GGAATCGATGTGGGAACGTCAATTCGCCGACGTCAGACAGAAGAGAACGC AAAACGCATACCGATGATGAACGAGCGTGACGAGTGTACAGAGCTCCACG AGGCTTTGGATGTTCAGGGTGCTAAGCTTCTTTCAGAGTTCACTGATTTC AACATTCCCGTGCTTCACCTAGAAAACTCTGAAGATGGTGAGCAAGCGAT AGATAAATCTATACGGCAAATTATTCATTTCGTGAACAGGAACTTGTGGC GCAAGGTGTTCCGGGAGGGGTAA back to top
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