Ggra1712.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1712.t1
Unique NameGgra1712.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length244
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:433630..434361 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1712Ggra1712Gracilaria gracilis GNS1m malegenetig00000050_pilon 433630..434361 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1712.t1.stop1Ggra1712.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000050_pilon 433630..433632 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1712.t1.CDS1Ggra1712.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000050_pilon 433630..434361 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1712.t1.exon1Ggra1712.t1.exon1Gracilaria gracilis GNS1m maleexontig00000050_pilon 433630..434361 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1712.t1.start1Ggra1712.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000050_pilon 434359..434361 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1712.t1Ggra1712.t1Gracilaria gracilis GNS1m malepolypeptidetig00000050_pilon 433630..434361 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1712.t1 ID=Ggra1712.t1|Name=Ggra1712.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=244bp
MAVQDPWANTMSSYQSNSNSTDEEGTAPRGRRVEEQLDHPTLNALRAQAR
KDAEQTHARKAPKVVRKAGKKKKSSRTISNIRSAEISRETRAQYIKLMEE
QIHLEEQKWCDVLSDMLDLTRKNIELQRKIDARKSANKRPRTEPLSGLLP
GEMDGLEGFRFPEWNSGDAEMNDVHVGDWSGCWEARRTDIVRGDSVWQRE
KRAVAAAKKDAGSPVTVFRTAQACSPKRHSPKVRAASPRSVRL*
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spliced messenger RNA

>Ggra1712.t1 ID=Ggra1712.t1|Name=Ggra1712.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=732bp|location=Sequence derived from alignment at tig00000050_pilon:433630..434361- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGTGCAAGATCCATGGGCAAACACAATGTCCAGCTACCAAAGCAA
CAGCAACAGCACCGACGAGGAGGGCACGGCCCCCCGTGGCCGCCGCGTCG
AGGAGCAGCTCGATCACCCCACGCTCAACGCGCTCCGCGCGCAGGCCAGG
AAGGATGCAGAGCAAACACACGCTCGCAAGGCACCCAAGGTGGTGCGCAA
AGCAGGCAAAAAGAAGAAATCCAGCCGCACAATAAGCAACATCCGCAGTG
CCGAGATCAGCCGCGAGACAAGGGCCCAGTACATCAAGCTCATGGAGGAA
CAGATTCACCTGGAGGAACAAAAGTGGTGTGATGTTCTATCAGACATGCT
GGACCTCACTCGCAAGAACATCGAGCTGCAGAGAAAGATCGACGCTCGCA
AGAGTGCCAACAAGCGGCCAAGGACAGAGCCGCTATCGGGGTTGCTGCCG
GGCGAAATGGACGGTCTTGAGGGGTTTCGTTTCCCCGAATGGAACAGTGG
AGACGCAGAAATGAACGACGTGCACGTCGGTGACTGGTCGGGGTGTTGGG
AGGCGCGGAGGACTGATATTGTGCGAGGGGACAGTGTGTGGCAACGAGAG
AAAAGAGCGGTGGCTGCCGCGAAGAAGGACGCTGGTTCACCTGTGACGGT
TTTTCGAACAGCACAAGCCTGTTCGCCGAAGCGACACTCGCCAAAAGTAC
GCGCCGCCTCGCCACGTAGCGTAAGACTGTGA
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protein sequence of Ggra1712.t1

>Ggra1712.t1 ID=Ggra1712.t1|Name=Ggra1712.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=244bp
MAVQDPWANTMSSYQSNSNSTDEEGTAPRGRRVEEQLDHPTLNALRAQAR
KDAEQTHARKAPKVVRKAGKKKKSSRTISNIRSAEISRETRAQYIKLMEE
QIHLEEQKWCDVLSDMLDLTRKNIELQRKIDARKSANKRPRTEPLSGLLP
GEMDGLEGFRFPEWNSGDAEMNDVHVGDWSGCWEARRTDIVRGDSVWQRE
KRAVAAAKKDAGSPVTVFRTAQACSPKRHSPKVRAASPRSVRL*
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mRNA from alignment at tig00000050_pilon:433630..434361-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1712.t1 ID=Ggra1712.t1|Name=Ggra1712.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=732bp|location=Sequence derived from alignment at tig00000050_pilon:433630..434361- (Gracilaria gracilis GNS1m male)
ATGGCAGTGCAAGATCCATGGGCAAACACAATGTCCAGCTACCAAAGCAA
CAGCAACAGCACCGACGAGGAGGGCACGGCCCCCCGTGGCCGCCGCGTCG
AGGAGCAGCTCGATCACCCCACGCTCAACGCGCTCCGCGCGCAGGCCAGG
AAGGATGCAGAGCAAACACACGCTCGCAAGGCACCCAAGGTGGTGCGCAA
AGCAGGCAAAAAGAAGAAATCCAGCCGCACAATAAGCAACATCCGCAGTG
CCGAGATCAGCCGCGAGACAAGGGCCCAGTACATCAAGCTCATGGAGGAA
CAGATTCACCTGGAGGAACAAAAGTGGTGTGATGTTCTATCAGACATGCT
GGACCTCACTCGCAAGAACATCGAGCTGCAGAGAAAGATCGACGCTCGCA
AGAGTGCCAACAAGCGGCCAAGGACAGAGCCGCTATCGGGGTTGCTGCCG
GGCGAAATGGACGGTCTTGAGGGGTTTCGTTTCCCCGAATGGAACAGTGG
AGACGCAGAAATGAACGACGTGCACGTCGGTGACTGGTCGGGGTGTTGGG
AGGCGCGGAGGACTGATATTGTGCGAGGGGACAGTGTGTGGCAACGAGAG
AAAAGAGCGGTGGCTGCCGCGAAGAAGGACGCTGGTTCACCTGTGACGGT
TTTTCGAACAGCACAAGCCTGTTCGCCGAAGCGACACTCGCCAAAAGTAC
GCGCCGCCTCGCCACGTAGCGTAAGACTGTGA
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Coding sequence (CDS) from alignment at tig00000050_pilon:433630..434361-

>Ggra1712.t1 ID=Ggra1712.t1|Name=Ggra1712.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=732bp|location=Sequence derived from alignment at tig00000050_pilon:433630..434361- (Gracilaria gracilis GNS1m male)
ATGGCAGTGCAAGATCCATGGGCAAACACAATGTCCAGCTACCAAAGCAA
CAGCAACAGCACCGACGAGGAGGGCACGGCCCCCCGTGGCCGCCGCGTCG
AGGAGCAGCTCGATCACCCCACGCTCAACGCGCTCCGCGCGCAGGCCAGG
AAGGATGCAGAGCAAACACACGCTCGCAAGGCACCCAAGGTGGTGCGCAA
AGCAGGCAAAAAGAAGAAATCCAGCCGCACAATAAGCAACATCCGCAGTG
CCGAGATCAGCCGCGAGACAAGGGCCCAGTACATCAAGCTCATGGAGGAA
CAGATTCACCTGGAGGAACAAAAGTGGTGTGATGTTCTATCAGACATGCT
GGACCTCACTCGCAAGAACATCGAGCTGCAGAGAAAGATCGACGCTCGCA
AGAGTGCCAACAAGCGGCCAAGGACAGAGCCGCTATCGGGGTTGCTGCCG
GGCGAAATGGACGGTCTTGAGGGGTTTCGTTTCCCCGAATGGAACAGTGG
AGACGCAGAAATGAACGACGTGCACGTCGGTGACTGGTCGGGGTGTTGGG
AGGCGCGGAGGACTGATATTGTGCGAGGGGACAGTGTGTGGCAACGAGAG
AAAAGAGCGGTGGCTGCCGCGAAGAAGGACGCTGGTTCACCTGTGACGGT
TTTTCGAACAGCACAAGCCTGTTCGCCGAAGCGACACTCGCCAAAAGTAC
GCGCCGCCTCGCCACGTAGCGTAAGACTGTGA
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