Ggra1663.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1663.t1
Unique NameGgra1663.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length150
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:290127..290576 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog55529.EKX37225
Preferred nameGNPNAT1
PFAMsAcetyltransf_1
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00166
KEGG koko:K00621
KEGG ReactionR02058
KEGG Pathwayko00520,map00520
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004343,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005770,GO:0005783,GO:0005793,GO:0005794,GO:0005829,GO:0006022,GO:0006023,GO:0006030,GO:0006031,GO:0006040,GO:0006041,GO:0006044,GO:0006045,GO:0006047,GO:0006048,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0008080,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009653,GO:0009987,GO:0010033,GO:0012505,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019438,GO:0019953,GO:0022412,GO:0022414,GO:0022622,GO:0030154,GO:0030246,GO:0030703,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0034097,GO:0034641,GO:0034654,GO:0036094,GO:0042221,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0046349,GO:0046483,GO:0048029,GO:0048364,GO:0048468,GO:0048477,GO:0048609,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0050896,GO:0051704,GO:0051716,GO:0055086,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0097708,GO:0099402,GO:1901071,GO:1901073,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1990823,GO:1990830
Evalue2.23e-36
EggNOG OGsCOG0454@1|root,KOG3396@2759|Eukaryota
EC2.3.1.4
Descriptionglucosamine 6-phosphate N-acetyltransferase activity
COG categoryK
BiGG ReactioniRC1080.CRv4_Au5_s12_g4266_t1
BRITEko00000,ko00001,ko01000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1663Ggra1663Gracilaria gracilis GNS1m malegenetig00000050_pilon 290127..290576 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1663.t1.start1Ggra1663.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000050_pilon 290127..290129 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1663.t1.CDS1Ggra1663.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000050_pilon 290127..290576 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1663.t1.exon1Ggra1663.t1.exon1Gracilaria gracilis GNS1m maleexontig00000050_pilon 290127..290576 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1663.t1.stop1Ggra1663.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000050_pilon 290574..290576 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1663.t1Ggra1663.t1Gracilaria gracilis GNS1m malepolypeptidetig00000050_pilon 290127..290576 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1663.t1 ID=Ggra1663.t1|Name=Ggra1663.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=150bp
MARPPAHDVTIRRIEEDDLQRGFFDVLAQLTKAPPLSPQQFGRLVRLQRE
LDVQLTLVAVRDATVVGTASVLIEPKFIRGGSPCAHIEDVVVDASLRATG
VGRQLIQRLLAFATEKGCYKVILDCADDNIPFYRKCGFQQKETQMAHYL*
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spliced messenger RNA

>Ggra1663.t1 ID=Ggra1663.t1|Name=Ggra1663.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=450bp|location=Sequence derived from alignment at tig00000050_pilon:290127..290576+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGAGGCCCCCGGCGCACGATGTGACCATTCGACGCATCGAGGAGGA
CGATCTGCAACGTGGCTTCTTCGACGTCTTGGCACAACTCACAAAGGCAC
CTCCCCTGTCGCCGCAGCAGTTTGGCCGACTGGTGCGACTGCAGAGGGAG
CTGGATGTGCAGCTCACGCTGGTTGCCGTCAGGGACGCCACCGTCGTCGG
CACTGCTTCCGTTTTGATTGAGCCCAAGTTTATCAGGGGCGGCTCGCCTT
GTGCTCATATTGAGGACGTTGTTGTCGATGCTTCGCTGAGGGCAACGGGC
GTCGGCAGACAACTTATTCAACGCCTACTGGCGTTTGCCACGGAGAAGGG
CTGTTATAAGGTCATTTTGGATTGTGCCGACGACAATATTCCTTTTTATC
GCAAGTGTGGATTTCAGCAGAAGGAGACGCAGATGGCACACTACTTATGA
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protein sequence of Ggra1663.t1

>Ggra1663.t1 ID=Ggra1663.t1|Name=Ggra1663.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=150bp
MARPPAHDVTIRRIEEDDLQRGFFDVLAQLTKAPPLSPQQFGRLVRLQRE
LDVQLTLVAVRDATVVGTASVLIEPKFIRGGSPCAHIEDVVVDASLRATG
VGRQLIQRLLAFATEKGCYKVILDCADDNIPFYRKCGFQQKETQMAHYL*
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mRNA from alignment at tig00000050_pilon:290127..290576+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1663.t1 ID=Ggra1663.t1|Name=Ggra1663.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=450bp|location=Sequence derived from alignment at tig00000050_pilon:290127..290576+ (Gracilaria gracilis GNS1m male)
ATGGCGAGGCCCCCGGCGCACGATGTGACCATTCGACGCATCGAGGAGGA
CGATCTGCAACGTGGCTTCTTCGACGTCTTGGCACAACTCACAAAGGCAC
CTCCCCTGTCGCCGCAGCAGTTTGGCCGACTGGTGCGACTGCAGAGGGAG
CTGGATGTGCAGCTCACGCTGGTTGCCGTCAGGGACGCCACCGTCGTCGG
CACTGCTTCCGTTTTGATTGAGCCCAAGTTTATCAGGGGCGGCTCGCCTT
GTGCTCATATTGAGGACGTTGTTGTCGATGCTTCGCTGAGGGCAACGGGC
GTCGGCAGACAACTTATTCAACGCCTACTGGCGTTTGCCACGGAGAAGGG
CTGTTATAAGGTCATTTTGGATTGTGCCGACGACAATATTCCTTTTTATC
GCAAGTGTGGATTTCAGCAGAAGGAGACGCAGATGGCACACTACTTATGA
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Coding sequence (CDS) from alignment at tig00000050_pilon:290127..290576+

>Ggra1663.t1 ID=Ggra1663.t1|Name=Ggra1663.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=450bp|location=Sequence derived from alignment at tig00000050_pilon:290127..290576+ (Gracilaria gracilis GNS1m male)
ATGGCGAGGCCCCCGGCGCACGATGTGACCATTCGACGCATCGAGGAGGA
CGATCTGCAACGTGGCTTCTTCGACGTCTTGGCACAACTCACAAAGGCAC
CTCCCCTGTCGCCGCAGCAGTTTGGCCGACTGGTGCGACTGCAGAGGGAG
CTGGATGTGCAGCTCACGCTGGTTGCCGTCAGGGACGCCACCGTCGTCGG
CACTGCTTCCGTTTTGATTGAGCCCAAGTTTATCAGGGGCGGCTCGCCTT
GTGCTCATATTGAGGACGTTGTTGTCGATGCTTCGCTGAGGGCAACGGGC
GTCGGCAGACAACTTATTCAACGCCTACTGGCGTTTGCCACGGAGAAGGG
CTGTTATAAGGTCATTTTGGATTGTGCCGACGACAATATTCCTTTTTATC
GCAAGTGTGGATTTCAGCAGAAGGAGACGCAGATGGCACACTACTTATGA
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