Ggra1657.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1657.t1
Unique NameGgra1657.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length198
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:279677..280270 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1657Ggra1657Gracilaria gracilis GNS1m malegenetig00000050_pilon 279677..280270 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1657.t1.stop1Ggra1657.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000050_pilon 279677..279679 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1657.t1.CDS1Ggra1657.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000050_pilon 279677..280270 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1657.t1.exon1Ggra1657.t1.exon1Gracilaria gracilis GNS1m maleexontig00000050_pilon 279677..280270 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1657.t1.start1Ggra1657.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000050_pilon 280268..280270 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1657.t1Ggra1657.t1Gracilaria gracilis GNS1m malepolypeptidetig00000050_pilon 279677..280270 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1657.t1 ID=Ggra1657.t1|Name=Ggra1657.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=198bp
MWPTNSPPSTEICGNGASKHLLNFLLTMSAQPAKQTVKGNLDFDQMSNFL
EEEQMKNGFRLVPEAVSRDFLDECEQLISQPTVPTNAKNENIQSKTMAPL
SAAPSSKDPADSHEISPTFIGDQPFSTKTDPPSVGMVETSATLGVTKNVK
ATNDTQSQATVDREPDSKGFDGKVECLQPKSDTCTDKDDSSANSSSL*
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spliced messenger RNA

>Ggra1657.t1 ID=Ggra1657.t1|Name=Ggra1657.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=594bp|location=Sequence derived from alignment at tig00000050_pilon:279677..280270- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGGCCCACCAACTCGCCTCCTTCGACCGAAATCTGTGGGAATGGAGC
ATCCAAGCATTTGTTAAACTTTTTGTTGACCATGTCCGCCCAACCTGCTA
AACAAACAGTCAAGGGTAACCTTGATTTTGACCAAATGTCCAACTTTCTC
GAAGAAGAGCAAATGAAGAACGGCTTTCGACTTGTTCCTGAAGCTGTGTC
TCGTGATTTTCTAGACGAGTGCGAACAACTCATATCACAACCCACAGTTC
CAACGAACGCAAAAAACGAAAACATTCAAAGCAAAACGATGGCTCCTCTA
TCAGCGGCACCATCATCCAAAGACCCCGCAGATTCGCATGAAATTTCACC
AACCTTCATCGGCGATCAACCATTTTCTACCAAAACTGACCCTCCCTCAG
TTGGCATGGTGGAAACTTCGGCCACTTTAGGTGTGACCAAAAACGTCAAA
GCAACTAACGACACTCAATCGCAGGCAACTGTTGACCGTGAACCGGACTC
GAAAGGTTTTGATGGAAAAGTGGAATGTCTACAACCCAAGTCTGATACAT
GTACAGACAAAGATGACAGCTCTGCTAATTCTTCTTCACTGTGA
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protein sequence of Ggra1657.t1

>Ggra1657.t1 ID=Ggra1657.t1|Name=Ggra1657.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=198bp
MWPTNSPPSTEICGNGASKHLLNFLLTMSAQPAKQTVKGNLDFDQMSNFL
EEEQMKNGFRLVPEAVSRDFLDECEQLISQPTVPTNAKNENIQSKTMAPL
SAAPSSKDPADSHEISPTFIGDQPFSTKTDPPSVGMVETSATLGVTKNVK
ATNDTQSQATVDREPDSKGFDGKVECLQPKSDTCTDKDDSSANSSSL*
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mRNA from alignment at tig00000050_pilon:279677..280270-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1657.t1 ID=Ggra1657.t1|Name=Ggra1657.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=594bp|location=Sequence derived from alignment at tig00000050_pilon:279677..280270- (Gracilaria gracilis GNS1m male)
ATGTGGCCCACCAACTCGCCTCCTTCGACCGAAATCTGTGGGAATGGAGC
ATCCAAGCATTTGTTAAACTTTTTGTTGACCATGTCCGCCCAACCTGCTA
AACAAACAGTCAAGGGTAACCTTGATTTTGACCAAATGTCCAACTTTCTC
GAAGAAGAGCAAATGAAGAACGGCTTTCGACTTGTTCCTGAAGCTGTGTC
TCGTGATTTTCTAGACGAGTGCGAACAACTCATATCACAACCCACAGTTC
CAACGAACGCAAAAAACGAAAACATTCAAAGCAAAACGATGGCTCCTCTA
TCAGCGGCACCATCATCCAAAGACCCCGCAGATTCGCATGAAATTTCACC
AACCTTCATCGGCGATCAACCATTTTCTACCAAAACTGACCCTCCCTCAG
TTGGCATGGTGGAAACTTCGGCCACTTTAGGTGTGACCAAAAACGTCAAA
GCAACTAACGACACTCAATCGCAGGCAACTGTTGACCGTGAACCGGACTC
GAAAGGTTTTGATGGAAAAGTGGAATGTCTACAACCCAAGTCTGATACAT
GTACAGACAAAGATGACAGCTCTGCTAATTCTTCTTCACTGTGA
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Coding sequence (CDS) from alignment at tig00000050_pilon:279677..280270-

>Ggra1657.t1 ID=Ggra1657.t1|Name=Ggra1657.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=594bp|location=Sequence derived from alignment at tig00000050_pilon:279677..280270- (Gracilaria gracilis GNS1m male)
ATGTGGCCCACCAACTCGCCTCCTTCGACCGAAATCTGTGGGAATGGAGC
ATCCAAGCATTTGTTAAACTTTTTGTTGACCATGTCCGCCCAACCTGCTA
AACAAACAGTCAAGGGTAACCTTGATTTTGACCAAATGTCCAACTTTCTC
GAAGAAGAGCAAATGAAGAACGGCTTTCGACTTGTTCCTGAAGCTGTGTC
TCGTGATTTTCTAGACGAGTGCGAACAACTCATATCACAACCCACAGTTC
CAACGAACGCAAAAAACGAAAACATTCAAAGCAAAACGATGGCTCCTCTA
TCAGCGGCACCATCATCCAAAGACCCCGCAGATTCGCATGAAATTTCACC
AACCTTCATCGGCGATCAACCATTTTCTACCAAAACTGACCCTCCCTCAG
TTGGCATGGTGGAAACTTCGGCCACTTTAGGTGTGACCAAAAACGTCAAA
GCAACTAACGACACTCAATCGCAGGCAACTGTTGACCGTGAACCGGACTC
GAAAGGTTTTGATGGAAAAGTGGAATGTCTACAACCCAAGTCTGATACAT
GTACAGACAAAGATGACAGCTCTGCTAATTCTTCTTCACTGTGA
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