Ggra1655.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1655.t1
Unique NameGgra1655.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length324
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:275585..276556 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog7719.XP_002121043.1
Preferred nameSAE1
PFAMsThiF
Max annot lvl33208|Metazoa
KEGG koko:K10684
KEGG Pathwayko04120,map04120
GOsGO:0002376,GO:0002520,GO:0002682,GO:0002684,GO:0003674,GO:0003824,GO:0004839,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006355,GO:0006464,GO:0006807,GO:0007275,GO:0007346,GO:0008022,GO:0008047,GO:0008150,GO:0008152,GO:0008641,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010646,GO:0010647,GO:0016567,GO:0016874,GO:0016877,GO:0016925,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019948,GO:0023051,GO:0023056,GO:0030097,GO:0030234,GO:0031323,GO:0031326,GO:0031347,GO:0031349,GO:0031510,GO:0031624,GO:0031974,GO:0031981,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033134,GO:0034121,GO:0034123,GO:0034124,GO:0034126,GO:0036211,GO:0042592,GO:0043008,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044388,GO:0044390,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0046982,GO:0046983,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0048872,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0051726,GO:0060216,GO:0060255,GO:0061484,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070647,GO:0071704,GO:0080090,GO:0080134,GO:0098772,GO:1901564,GO:1902494,GO:1903506,GO:2000112,GO:2001141
Evalue2.82e-39
EggNOG OGsCOG0476@1|root,KOG2014@2759|Eukaryota,395DT@33154|Opisthokonta,3BH0I@33208|Metazoa,3CV84@33213|Bilateria,48B0Z@7711|Chordata
EC6.2.1.45
DescriptionSUMO activating enzyme activity
COG categoryO
BRITEko00000,ko00001,ko01000,ko04121
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1655Ggra1655Gracilaria gracilis GNS1m malegenetig00000050_pilon 275585..276556 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1655.t1.stop1Ggra1655.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000050_pilon 275585..275587 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1655.t1.CDS1Ggra1655.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000050_pilon 275585..276556 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1655.t1.exon1Ggra1655.t1.exon1Gracilaria gracilis GNS1m maleexontig00000050_pilon 275585..276556 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1655.t1.start1Ggra1655.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000050_pilon 276554..276556 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1655.t1Ggra1655.t1Gracilaria gracilis GNS1m malepolypeptidetig00000050_pilon 275585..276556 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1655.t1 ID=Ggra1655.t1|Name=Ggra1655.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=324bp
MPATESDPSEQQPAAPRELTGEEAALYDRQIRLWGLEAQRKLASSSVLLM
GAVCSLEAQEVAKNVVLAGVARLGLVEYEHRAPESEQNFLGSSVERIIQS
LTEMNPHVNVQVVEKPCLEAVQQFSVVCAFGLAQKQELAFADSCRAANVP
FMTGRACGVVGWVFFDLGAQYSYQKTKSSTDDDENSSVSTCQVSFCSYRQ
AVDHPWGGESKRSAFGWHVARSMQEFEARHKRMPLGNEEDTKLMADVYTE
LYTSKKSRMSNAQLVERVAKTATCVLGPVSAIVGGMWGREVVKVVSGKGE
PLRNFFFFNADSNVGSVELVGPL*
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spliced messenger RNA

>Ggra1655.t1 ID=Ggra1655.t1|Name=Ggra1655.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=972bp|location=Sequence derived from alignment at tig00000050_pilon:275585..276556- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGGCAACGGAATCTGATCCAAGCGAACAACAGCCTGCAGCGCCAAG
GGAGCTCACGGGTGAAGAAGCGGCGCTATACGACCGTCAGATACGACTAT
GGGGTCTAGAGGCTCAGCGCAAATTGGCCTCCTCCTCCGTGCTTCTCATG
GGCGCTGTCTGTAGCCTGGAAGCACAAGAGGTGGCTAAGAATGTCGTTCT
TGCAGGGGTCGCTCGTCTGGGACTTGTTGAATACGAGCACAGGGCCCCCG
AATCAGAACAGAACTTTCTAGGATCCAGTGTGGAGCGAATTATTCAAAGT
CTTACCGAGATGAACCCTCACGTCAACGTGCAGGTTGTAGAGAAGCCCTG
TTTGGAGGCTGTGCAACAGTTTTCGGTTGTGTGCGCGTTTGGACTGGCGC
AGAAACAAGAACTTGCATTCGCTGATTCATGTCGCGCTGCGAATGTACCG
TTTATGACTGGCCGCGCTTGCGGAGTGGTAGGATGGGTGTTCTTCGACCT
GGGAGCTCAGTACAGTTATCAAAAGACGAAGTCTTCAACTGATGACGATG
AAAATTCTTCTGTTTCAACATGTCAGGTATCTTTTTGTTCCTACAGACAA
GCTGTAGATCATCCCTGGGGCGGAGAATCAAAGCGGAGTGCGTTTGGATG
GCATGTAGCGCGCAGCATGCAAGAGTTTGAAGCTCGCCATAAACGTATGC
CATTGGGAAACGAGGAAGACACGAAATTGATGGCTGACGTATACACAGAA
TTGTATACCAGCAAAAAAAGTAGAATGTCGAATGCCCAGCTCGTTGAGAG
GGTAGCTAAGACAGCTACTTGTGTGCTAGGTCCGGTGTCTGCTATCGTTG
GTGGCATGTGGGGAAGGGAGGTAGTCAAAGTGGTTTCTGGAAAGGGAGAG
CCCCTCAGAAACTTCTTTTTCTTCAACGCTGACAGTAACGTGGGGTCTGT
TGAACTTGTTGGCCCCTTGTAA
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protein sequence of Ggra1655.t1

>Ggra1655.t1 ID=Ggra1655.t1|Name=Ggra1655.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=324bp
MPATESDPSEQQPAAPRELTGEEAALYDRQIRLWGLEAQRKLASSSVLLM
GAVCSLEAQEVAKNVVLAGVARLGLVEYEHRAPESEQNFLGSSVERIIQS
LTEMNPHVNVQVVEKPCLEAVQQFSVVCAFGLAQKQELAFADSCRAANVP
FMTGRACGVVGWVFFDLGAQYSYQKTKSSTDDDENSSVSTCQVSFCSYRQ
AVDHPWGGESKRSAFGWHVARSMQEFEARHKRMPLGNEEDTKLMADVYTE
LYTSKKSRMSNAQLVERVAKTATCVLGPVSAIVGGMWGREVVKVVSGKGE
PLRNFFFFNADSNVGSVELVGPL*
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mRNA from alignment at tig00000050_pilon:275585..276556-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1655.t1 ID=Ggra1655.t1|Name=Ggra1655.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=972bp|location=Sequence derived from alignment at tig00000050_pilon:275585..276556- (Gracilaria gracilis GNS1m male)
ATGCCGGCAACGGAATCTGATCCAAGCGAACAACAGCCTGCAGCGCCAAG
GGAGCTCACGGGTGAAGAAGCGGCGCTATACGACCGTCAGATACGACTAT
GGGGTCTAGAGGCTCAGCGCAAATTGGCCTCCTCCTCCGTGCTTCTCATG
GGCGCTGTCTGTAGCCTGGAAGCACAAGAGGTGGCTAAGAATGTCGTTCT
TGCAGGGGTCGCTCGTCTGGGACTTGTTGAATACGAGCACAGGGCCCCCG
AATCAGAACAGAACTTTCTAGGATCCAGTGTGGAGCGAATTATTCAAAGT
CTTACCGAGATGAACCCTCACGTCAACGTGCAGGTTGTAGAGAAGCCCTG
TTTGGAGGCTGTGCAACAGTTTTCGGTTGTGTGCGCGTTTGGACTGGCGC
AGAAACAAGAACTTGCATTCGCTGATTCATGTCGCGCTGCGAATGTACCG
TTTATGACTGGCCGCGCTTGCGGAGTGGTAGGATGGGTGTTCTTCGACCT
GGGAGCTCAGTACAGTTATCAAAAGACGAAGTCTTCAACTGATGACGATG
AAAATTCTTCTGTTTCAACATGTCAGGTATCTTTTTGTTCCTACAGACAA
GCTGTAGATCATCCCTGGGGCGGAGAATCAAAGCGGAGTGCGTTTGGATG
GCATGTAGCGCGCAGCATGCAAGAGTTTGAAGCTCGCCATAAACGTATGC
CATTGGGAAACGAGGAAGACACGAAATTGATGGCTGACGTATACACAGAA
TTGTATACCAGCAAAAAAAGTAGAATGTCGAATGCCCAGCTCGTTGAGAG
GGTAGCTAAGACAGCTACTTGTGTGCTAGGTCCGGTGTCTGCTATCGTTG
GTGGCATGTGGGGAAGGGAGGTAGTCAAAGTGGTTTCTGGAAAGGGAGAG
CCCCTCAGAAACTTCTTTTTCTTCAACGCTGACAGTAACGTGGGGTCTGT
TGAACTTGTTGGCCCCTTGTAA
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Coding sequence (CDS) from alignment at tig00000050_pilon:275585..276556-

>Ggra1655.t1 ID=Ggra1655.t1|Name=Ggra1655.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=972bp|location=Sequence derived from alignment at tig00000050_pilon:275585..276556- (Gracilaria gracilis GNS1m male)
ATGCCGGCAACGGAATCTGATCCAAGCGAACAACAGCCTGCAGCGCCAAG
GGAGCTCACGGGTGAAGAAGCGGCGCTATACGACCGTCAGATACGACTAT
GGGGTCTAGAGGCTCAGCGCAAATTGGCCTCCTCCTCCGTGCTTCTCATG
GGCGCTGTCTGTAGCCTGGAAGCACAAGAGGTGGCTAAGAATGTCGTTCT
TGCAGGGGTCGCTCGTCTGGGACTTGTTGAATACGAGCACAGGGCCCCCG
AATCAGAACAGAACTTTCTAGGATCCAGTGTGGAGCGAATTATTCAAAGT
CTTACCGAGATGAACCCTCACGTCAACGTGCAGGTTGTAGAGAAGCCCTG
TTTGGAGGCTGTGCAACAGTTTTCGGTTGTGTGCGCGTTTGGACTGGCGC
AGAAACAAGAACTTGCATTCGCTGATTCATGTCGCGCTGCGAATGTACCG
TTTATGACTGGCCGCGCTTGCGGAGTGGTAGGATGGGTGTTCTTCGACCT
GGGAGCTCAGTACAGTTATCAAAAGACGAAGTCTTCAACTGATGACGATG
AAAATTCTTCTGTTTCAACATGTCAGGTATCTTTTTGTTCCTACAGACAA
GCTGTAGATCATCCCTGGGGCGGAGAATCAAAGCGGAGTGCGTTTGGATG
GCATGTAGCGCGCAGCATGCAAGAGTTTGAAGCTCGCCATAAACGTATGC
CATTGGGAAACGAGGAAGACACGAAATTGATGGCTGACGTATACACAGAA
TTGTATACCAGCAAAAAAAGTAGAATGTCGAATGCCCAGCTCGTTGAGAG
GGTAGCTAAGACAGCTACTTGTGTGCTAGGTCCGGTGTCTGCTATCGTTG
GTGGCATGTGGGGAAGGGAGGTAGTCAAAGTGGTTTCTGGAAAGGGAGAG
CCCCTCAGAAACTTCTTTTTCTTCAACGCTGACAGTAACGTGGGGTCTGT
TGAACTTGTTGGCCCCTTGTAA
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