Ggra1614.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1614.t1
Unique NameGgra1614.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length161
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000146_piloncontigtig00000146_pilon:129811..130293 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1614Ggra1614Gracilaria gracilis GNS1m malegenetig00000146_pilon 129811..130293 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1614.t1.stop1Ggra1614.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000146_pilon 129811..129813 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1614.t1.CDS1Ggra1614.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000146_pilon 129811..130293 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1614.t1.exon1Ggra1614.t1.exon1Gracilaria gracilis GNS1m maleexontig00000146_pilon 129811..130293 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1614.t1.start1Ggra1614.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000146_pilon 130291..130293 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1614.t1Ggra1614.t1Gracilaria gracilis GNS1m malepolypeptidetig00000146_pilon 129811..130293 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1614.t1 ID=Ggra1614.t1|Name=Ggra1614.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=161bp
MKSFGVVLIFLTAVTFGGQAQASSQDTSVGNGQTDSVIVLGARAKRLQDE
VIQYNVDSMNKWMGGEAVSVPKYVGEIVRFAKLAVNVSLQDALDGGRNGE
DMVGTMRASADCKACKLSCAGAAAVCTTGCAFASVYRLICVGAWAATNLG
CVGACTGLAC*
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spliced messenger RNA

>Ggra1614.t1 ID=Ggra1614.t1|Name=Ggra1614.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=483bp|location=Sequence derived from alignment at tig00000146_pilon:129811..130293- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGTCGTTCGGTGTTGTGCTTATTTTTCTTACCGCTGTCACTTTTGG
AGGACAAGCCCAGGCGTCGTCGCAAGACACCTCTGTTGGTAATGGGCAAA
CTGATTCTGTGATAGTATTGGGTGCTCGGGCCAAGCGTCTGCAAGATGAA
GTGATTCAATATAACGTGGATTCTATGAATAAGTGGATGGGAGGAGAAGC
AGTGTCTGTGCCAAAGTACGTGGGTGAGATTGTGCGGTTTGCTAAACTGG
CGGTGAATGTGTCGTTGCAGGACGCACTTGATGGCGGTCGGAATGGTGAG
GATATGGTCGGTACTATGAGGGCATCTGCAGATTGCAAGGCTTGTAAGCT
GAGCTGTGCCGGTGCAGCTGCTGTGTGCACTACTGGATGTGCTTTTGCCA
GCGTGTATAGGCTTATCTGTGTTGGTGCTTGGGCTGCCACAAACTTGGGT
TGCGTCGGCGCTTGTACTGGATTGGCTTGCTAA
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protein sequence of Ggra1614.t1

>Ggra1614.t1 ID=Ggra1614.t1|Name=Ggra1614.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=161bp
MKSFGVVLIFLTAVTFGGQAQASSQDTSVGNGQTDSVIVLGARAKRLQDE
VIQYNVDSMNKWMGGEAVSVPKYVGEIVRFAKLAVNVSLQDALDGGRNGE
DMVGTMRASADCKACKLSCAGAAAVCTTGCAFASVYRLICVGAWAATNLG
CVGACTGLAC*
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mRNA from alignment at tig00000146_pilon:129811..130293-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1614.t1 ID=Ggra1614.t1|Name=Ggra1614.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=483bp|location=Sequence derived from alignment at tig00000146_pilon:129811..130293- (Gracilaria gracilis GNS1m male)
ATGAAGTCGTTCGGTGTTGTGCTTATTTTTCTTACCGCTGTCACTTTTGG
AGGACAAGCCCAGGCGTCGTCGCAAGACACCTCTGTTGGTAATGGGCAAA
CTGATTCTGTGATAGTATTGGGTGCTCGGGCCAAGCGTCTGCAAGATGAA
GTGATTCAATATAACGTGGATTCTATGAATAAGTGGATGGGAGGAGAAGC
AGTGTCTGTGCCAAAGTACGTGGGTGAGATTGTGCGGTTTGCTAAACTGG
CGGTGAATGTGTCGTTGCAGGACGCACTTGATGGCGGTCGGAATGGTGAG
GATATGGTCGGTACTATGAGGGCATCTGCAGATTGCAAGGCTTGTAAGCT
GAGCTGTGCCGGTGCAGCTGCTGTGTGCACTACTGGATGTGCTTTTGCCA
GCGTGTATAGGCTTATCTGTGTTGGTGCTTGGGCTGCCACAAACTTGGGT
TGCGTCGGCGCTTGTACTGGATTGGCTTGCTAA
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Coding sequence (CDS) from alignment at tig00000146_pilon:129811..130293-

>Ggra1614.t1 ID=Ggra1614.t1|Name=Ggra1614.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=483bp|location=Sequence derived from alignment at tig00000146_pilon:129811..130293- (Gracilaria gracilis GNS1m male)
ATGAAGTCGTTCGGTGTTGTGCTTATTTTTCTTACCGCTGTCACTTTTGG
AGGACAAGCCCAGGCGTCGTCGCAAGACACCTCTGTTGGTAATGGGCAAA
CTGATTCTGTGATAGTATTGGGTGCTCGGGCCAAGCGTCTGCAAGATGAA
GTGATTCAATATAACGTGGATTCTATGAATAAGTGGATGGGAGGAGAAGC
AGTGTCTGTGCCAAAGTACGTGGGTGAGATTGTGCGGTTTGCTAAACTGG
CGGTGAATGTGTCGTTGCAGGACGCACTTGATGGCGGTCGGAATGGTGAG
GATATGGTCGGTACTATGAGGGCATCTGCAGATTGCAAGGCTTGTAAGCT
GAGCTGTGCCGGTGCAGCTGCTGTGTGCACTACTGGATGTGCTTTTGCCA
GCGTGTATAGGCTTATCTGTGTTGGTGCTTGGGCTGCCACAAACTTGGGT
TGCGTCGGCGCTTGTACTGGATTGGCTTGCTAA
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