Ggra1459.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1459.t1
Unique NameGgra1459.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length394
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:148246..149427 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1459Ggra1459Gracilaria gracilis GNS1m malegenetig00000844_pilon 148246..149427 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1459.t1.stop1Ggra1459.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000844_pilon 148246..148248 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1459.t1.CDS1Ggra1459.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000844_pilon 148246..149427 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1459.t1.exon1Ggra1459.t1.exon1Gracilaria gracilis GNS1m maleexontig00000844_pilon 148246..149427 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1459.t1.start1Ggra1459.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000844_pilon 149425..149427 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1459.t1Ggra1459.t1Gracilaria gracilis GNS1m malepolypeptidetig00000844_pilon 148246..149427 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1459.t1 ID=Ggra1459.t1|Name=Ggra1459.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=394bp
MSEISDLILHILTATPTLRALQLTDDGSLTFEIGKALATSSIRTLHVLKP
RASCVTAFAHQEERVFTSSFRGISTVLLTQAFHGVKEINSHGIKAITVML
RDSSRGGFSNFLIRPHKDAPDFHFFPVFRAMLVKHLGSTCDATVHVSSVV
MHRTRKPQPELDVEIQAPTARDLQYFLHPPNYLHRFNSAAGVLRLDLPSI
TEVNRFLSADQRTKTRARYRTRATSTLCHIRADFLLGNEDSFCNLCKCLL
TLLSSRNEVHTLEVSREFVAFANTRTVPRLLKRVKNLKMVSLRNPREKDY
SETPSPSIVSDRLFLERLPTFIDHLERNCVHLETINMGLCFPQYPFEKRR
ELRPGIITALNRLLQYEKCCLKVDIDGLRRQLLRWLERVDLDH*
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spliced messenger RNA

>Ggra1459.t1 ID=Ggra1459.t1|Name=Ggra1459.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1182bp|location=Sequence derived from alignment at tig00000844_pilon:148246..149427- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCAGAGATATCAGACCTTATCCTTCATATCTTGACGGCCACCCCGAC
CCTCCGAGCACTACAGCTCACAGACGATGGTTCTCTTACTTTCGAAATTG
GTAAGGCTCTCGCCACGTCTTCGATCCGCACTCTTCATGTCCTAAAGCCT
CGAGCAAGCTGCGTAACTGCGTTTGCTCATCAGGAAGAACGTGTATTCAC
TTCGTCCTTTAGGGGAATTAGCACTGTTCTTCTGACCCAAGCTTTCCACG
GCGTCAAAGAAATTAACTCGCACGGCATCAAGGCAATCACCGTCATGCTT
CGGGACTCATCGAGAGGGGGCTTCAGTAATTTTCTCATAAGGCCACACAA
GGACGCTCCGGATTTTCACTTCTTTCCGGTCTTCCGTGCAATGCTCGTTA
AGCACTTGGGGTCTACTTGTGATGCGACTGTCCATGTTTCCTCGGTGGTA
ATGCACAGAACGCGGAAACCTCAACCGGAACTCGACGTCGAGATACAAGC
ACCAACTGCACGTGACTTGCAATACTTCTTACATCCTCCCAACTACTTGC
ACCGGTTCAACAGCGCAGCTGGCGTTCTCAGATTGGACCTCCCTTCCATT
ACGGAAGTCAACAGGTTTCTATCAGCAGATCAACGCACAAAGACCAGGGC
GCGTTATCGCACCCGAGCGACTTCAACTTTGTGTCACATTCGTGCTGACT
TTTTGTTGGGAAACGAAGACAGTTTCTGCAATTTGTGCAAGTGTTTGTTG
ACCCTTCTTAGTTCTCGCAATGAAGTGCATACTTTGGAGGTATCTCGAGA
GTTTGTTGCTTTCGCAAATACTAGAACAGTTCCACGCTTGCTGAAGAGGG
TAAAGAACCTTAAGATGGTTTCCCTTCGAAACCCGAGGGAAAAAGACTAT
TCAGAGACCCCATCCCCTTCAATAGTGAGTGACCGCTTGTTCTTGGAACG
ATTGCCGACATTCATAGACCATTTGGAGCGAAACTGTGTGCATCTGGAAA
CCATTAACATGGGTCTGTGCTTTCCCCAGTACCCTTTCGAAAAACGACGA
GAACTGCGGCCCGGAATTATCACTGCTTTGAATCGACTCCTTCAGTATGA
GAAATGCTGTCTGAAAGTTGATATCGACGGACTTCGGAGGCAGCTTCTCA
GATGGTTAGAACGTGTTGACCTTGATCACTGA
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protein sequence of Ggra1459.t1

>Ggra1459.t1 ID=Ggra1459.t1|Name=Ggra1459.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=394bp
MSEISDLILHILTATPTLRALQLTDDGSLTFEIGKALATSSIRTLHVLKP
RASCVTAFAHQEERVFTSSFRGISTVLLTQAFHGVKEINSHGIKAITVML
RDSSRGGFSNFLIRPHKDAPDFHFFPVFRAMLVKHLGSTCDATVHVSSVV
MHRTRKPQPELDVEIQAPTARDLQYFLHPPNYLHRFNSAAGVLRLDLPSI
TEVNRFLSADQRTKTRARYRTRATSTLCHIRADFLLGNEDSFCNLCKCLL
TLLSSRNEVHTLEVSREFVAFANTRTVPRLLKRVKNLKMVSLRNPREKDY
SETPSPSIVSDRLFLERLPTFIDHLERNCVHLETINMGLCFPQYPFEKRR
ELRPGIITALNRLLQYEKCCLKVDIDGLRRQLLRWLERVDLDH*
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mRNA from alignment at tig00000844_pilon:148246..149427-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1459.t1 ID=Ggra1459.t1|Name=Ggra1459.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1182bp|location=Sequence derived from alignment at tig00000844_pilon:148246..149427- (Gracilaria gracilis GNS1m male)
ATGTCAGAGATATCAGACCTTATCCTTCATATCTTGACGGCCACCCCGAC
CCTCCGAGCACTACAGCTCACAGACGATGGTTCTCTTACTTTCGAAATTG
GTAAGGCTCTCGCCACGTCTTCGATCCGCACTCTTCATGTCCTAAAGCCT
CGAGCAAGCTGCGTAACTGCGTTTGCTCATCAGGAAGAACGTGTATTCAC
TTCGTCCTTTAGGGGAATTAGCACTGTTCTTCTGACCCAAGCTTTCCACG
GCGTCAAAGAAATTAACTCGCACGGCATCAAGGCAATCACCGTCATGCTT
CGGGACTCATCGAGAGGGGGCTTCAGTAATTTTCTCATAAGGCCACACAA
GGACGCTCCGGATTTTCACTTCTTTCCGGTCTTCCGTGCAATGCTCGTTA
AGCACTTGGGGTCTACTTGTGATGCGACTGTCCATGTTTCCTCGGTGGTA
ATGCACAGAACGCGGAAACCTCAACCGGAACTCGACGTCGAGATACAAGC
ACCAACTGCACGTGACTTGCAATACTTCTTACATCCTCCCAACTACTTGC
ACCGGTTCAACAGCGCAGCTGGCGTTCTCAGATTGGACCTCCCTTCCATT
ACGGAAGTCAACAGGTTTCTATCAGCAGATCAACGCACAAAGACCAGGGC
GCGTTATCGCACCCGAGCGACTTCAACTTTGTGTCACATTCGTGCTGACT
TTTTGTTGGGAAACGAAGACAGTTTCTGCAATTTGTGCAAGTGTTTGTTG
ACCCTTCTTAGTTCTCGCAATGAAGTGCATACTTTGGAGGTATCTCGAGA
GTTTGTTGCTTTCGCAAATACTAGAACAGTTCCACGCTTGCTGAAGAGGG
TAAAGAACCTTAAGATGGTTTCCCTTCGAAACCCGAGGGAAAAAGACTAT
TCAGAGACCCCATCCCCTTCAATAGTGAGTGACCGCTTGTTCTTGGAACG
ATTGCCGACATTCATAGACCATTTGGAGCGAAACTGTGTGCATCTGGAAA
CCATTAACATGGGTCTGTGCTTTCCCCAGTACCCTTTCGAAAAACGACGA
GAACTGCGGCCCGGAATTATCACTGCTTTGAATCGACTCCTTCAGTATGA
GAAATGCTGTCTGAAAGTTGATATCGACGGACTTCGGAGGCAGCTTCTCA
GATGGTTAGAACGTGTTGACCTTGATCACTGA
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Coding sequence (CDS) from alignment at tig00000844_pilon:148246..149427-

>Ggra1459.t1 ID=Ggra1459.t1|Name=Ggra1459.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1182bp|location=Sequence derived from alignment at tig00000844_pilon:148246..149427- (Gracilaria gracilis GNS1m male)
ATGTCAGAGATATCAGACCTTATCCTTCATATCTTGACGGCCACCCCGAC
CCTCCGAGCACTACAGCTCACAGACGATGGTTCTCTTACTTTCGAAATTG
GTAAGGCTCTCGCCACGTCTTCGATCCGCACTCTTCATGTCCTAAAGCCT
CGAGCAAGCTGCGTAACTGCGTTTGCTCATCAGGAAGAACGTGTATTCAC
TTCGTCCTTTAGGGGAATTAGCACTGTTCTTCTGACCCAAGCTTTCCACG
GCGTCAAAGAAATTAACTCGCACGGCATCAAGGCAATCACCGTCATGCTT
CGGGACTCATCGAGAGGGGGCTTCAGTAATTTTCTCATAAGGCCACACAA
GGACGCTCCGGATTTTCACTTCTTTCCGGTCTTCCGTGCAATGCTCGTTA
AGCACTTGGGGTCTACTTGTGATGCGACTGTCCATGTTTCCTCGGTGGTA
ATGCACAGAACGCGGAAACCTCAACCGGAACTCGACGTCGAGATACAAGC
ACCAACTGCACGTGACTTGCAATACTTCTTACATCCTCCCAACTACTTGC
ACCGGTTCAACAGCGCAGCTGGCGTTCTCAGATTGGACCTCCCTTCCATT
ACGGAAGTCAACAGGTTTCTATCAGCAGATCAACGCACAAAGACCAGGGC
GCGTTATCGCACCCGAGCGACTTCAACTTTGTGTCACATTCGTGCTGACT
TTTTGTTGGGAAACGAAGACAGTTTCTGCAATTTGTGCAAGTGTTTGTTG
ACCCTTCTTAGTTCTCGCAATGAAGTGCATACTTTGGAGGTATCTCGAGA
GTTTGTTGCTTTCGCAAATACTAGAACAGTTCCACGCTTGCTGAAGAGGG
TAAAGAACCTTAAGATGGTTTCCCTTCGAAACCCGAGGGAAAAAGACTAT
TCAGAGACCCCATCCCCTTCAATAGTGAGTGACCGCTTGTTCTTGGAACG
ATTGCCGACATTCATAGACCATTTGGAGCGAAACTGTGTGCATCTGGAAA
CCATTAACATGGGTCTGTGCTTTCCCCAGTACCCTTTCGAAAAACGACGA
GAACTGCGGCCCGGAATTATCACTGCTTTGAATCGACTCCTTCAGTATGA
GAAATGCTGTCTGAAAGTTGATATCGACGGACTTCGGAGGCAGCTTCTCA
GATGGTTAGAACGTGTTGACCTTGATCACTGA
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