Ggra1452.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1452.t1
Unique NameGgra1452.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1160
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:124612..130899 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog3712.Bo4g010430.1
PFAMsRNA_pol_Rpb2_1,RNA_pol_Rpb2_2,RNA_pol_Rpb2_3,RNA_pol_Rpb2_4,RNA_pol_Rpb2_5,RNA_pol_Rpb2_6,RNA_pol_Rpb2_7
Max annot lvl35493|Streptophyta
KEGG rclassRC02795
KEGG koko:K03010
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko05016,ko05169,map00230,map00240,map01100,map03020,map05016,map05169
KEGG ModuleM00180
GOsGO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005737,GO:0005829,GO:0005911,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009506,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0014070,GO:0016070,GO:0016441,GO:0016458,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0030054,GO:0030880,GO:0031047,GO:0031050,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034654,GO:0035194,GO:0035195,GO:0035196,GO:0040029,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043331,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0048519,GO:0050789,GO:0050896,GO:0051716,GO:0055029,GO:0055044,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070887,GO:0070918,GO:0071310,GO:0071359,GO:0071407,GO:0071704,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1901698,GO:1901699,GO:1902494,GO:1990234
Evalue1.28e-159
EggNOG OGsCOG0085@1|root,KOG0214@2759|Eukaryota,37SWI@33090|Viridiplantae,3G7KC@35493|Streptophyta,3HN9Y@3699|Brassicales
EC2.7.7.6
DescriptionDNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
COG categoryK
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1452Ggra1452Gracilaria gracilis GNS1m malegenetig00000844_pilon 124612..130899 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1452.t1.start1Ggra1452.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000844_pilon 124612..124614 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1452.t1.CDS1Ggra1452.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000844_pilon 124612..124875 +
Ggra1452.t1.CDS2Ggra1452.t1.CDS2Gracilaria gracilis GNS1m maleCDStig00000844_pilon 124994..125859 +
Ggra1452.t1.CDS3Ggra1452.t1.CDS3Gracilaria gracilis GNS1m maleCDStig00000844_pilon 126064..126466 +
Ggra1452.t1.CDS4Ggra1452.t1.CDS4Gracilaria gracilis GNS1m maleCDStig00000844_pilon 128057..128205 +
Ggra1452.t1.CDS5Ggra1452.t1.CDS5Gracilaria gracilis GNS1m maleCDStig00000844_pilon 128287..128556 +
Ggra1452.t1.CDS6Ggra1452.t1.CDS6Gracilaria gracilis GNS1m maleCDStig00000844_pilon 129194..129574 +
Ggra1452.t1.CDS7Ggra1452.t1.CDS7Gracilaria gracilis GNS1m maleCDStig00000844_pilon 129753..130899 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1452.t1.exon1Ggra1452.t1.exon1Gracilaria gracilis GNS1m maleexontig00000844_pilon 124612..124875 +
Ggra1452.t1.exon2Ggra1452.t1.exon2Gracilaria gracilis GNS1m maleexontig00000844_pilon 124994..125859 +
Ggra1452.t1.exon3Ggra1452.t1.exon3Gracilaria gracilis GNS1m maleexontig00000844_pilon 126064..126466 +
Ggra1452.t1.exon4Ggra1452.t1.exon4Gracilaria gracilis GNS1m maleexontig00000844_pilon 128057..128205 +
Ggra1452.t1.exon5Ggra1452.t1.exon5Gracilaria gracilis GNS1m maleexontig00000844_pilon 128287..128556 +
Ggra1452.t1.exon6Ggra1452.t1.exon6Gracilaria gracilis GNS1m maleexontig00000844_pilon 129194..129574 +
Ggra1452.t1.exon7Ggra1452.t1.exon7Gracilaria gracilis GNS1m maleexontig00000844_pilon 129753..130899 +


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1452.t1.intron1Ggra1452.t1.intron1Gracilaria gracilis GNS1m maleintrontig00000844_pilon 124876..124993 +
Ggra1452.t1.intron2Ggra1452.t1.intron2Gracilaria gracilis GNS1m maleintrontig00000844_pilon 125860..126063 +
Ggra1452.t1.intron3Ggra1452.t1.intron3Gracilaria gracilis GNS1m maleintrontig00000844_pilon 126467..128056 +
Ggra1452.t1.intron4Ggra1452.t1.intron4Gracilaria gracilis GNS1m maleintrontig00000844_pilon 128206..128286 +
Ggra1452.t1.intron5Ggra1452.t1.intron5Gracilaria gracilis GNS1m maleintrontig00000844_pilon 128557..129193 +
Ggra1452.t1.intron6Ggra1452.t1.intron6Gracilaria gracilis GNS1m maleintrontig00000844_pilon 129575..129752 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1452.t1.stop1Ggra1452.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000844_pilon 130897..130899 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1452.t1Ggra1452.t1Gracilaria gracilis GNS1m malepolypeptidetig00000844_pilon 124612..130899 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1452.t1 ID=Ggra1452.t1|Name=Ggra1452.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1160bp
MQVESRPSVHNNGYYDTTRDLEYEVHDRDAEYMNGDGFADEPEDVFDEDE
EPITEEDAWTVIASHFKTRGLVGQQLDSYDVFMTNTMQDLVDQTPDIEII
SEDQHMPGEMEQDTAKRVIIRFGQLRMGRPFFQESTGEAQLLYPNQARLR
NLTYASPLYCEISKTELEVHPDTGEEVHLGQENKTVFFGRVPLMLRSRYC
LLADLKTDKELNKMGECHVDQGGYFVINGSEKVLLAQERMSTNHCFVFVR
SLPSTYSHVAEVRSASEASNRPTTSLQVKLKSRGKGRDGLTGSTIHCQIP
SIREEIPVVVLFRALGCANDKEVMSHICYDLSDEELMTSVMPSIEEAQDI
RDVSSALDFIGRRGPGKGGLSRGDRIKQLLRKLMKDVRASAKRIINAGGD
VDLNSLVKSSIITNGLKYALSTGNWNSAGGAPTKTGVSQVLNRLTFASSL
SHLRRMNSPIGREGKLAKPRQLHNTHWGMICPAETPEGQACGLVKNLALM
AYISVGSQAAPRLKHMVDDKIHSRSNGPVTLLTRQPLEGRARGGGLRFGE
MERDCLISHGGANFLRERLMDMSDKYRVHVCDICGLIAIADLRKNTFHCR
NCNNSTAISQVYIPYACKLLFQELMAMSVAPRLMVKKEEPPKKKRNRAVP
SRAFGNAIASLSFARPRFMASAATVAAAAVATAPQRVITVAAIQFSCTND
IESNCRRAESLVRDAVRKGANIVLLQELFATLYFPIDQMDYARLAVSLDD
EKSYILRFQSLARELSVVLPISFYERSNNAYFNSVVVVDADGSQLGLYRK
SHIPDGPGYQEKFYFTPGDTGFRTFKTRFATIGIGICWDQWFPEAARCMA
IKGAELLLYPTAIGSEPQDPALDTCSQWQKCMQGHAAANMVPVIAANRVG
KELGVSSDISITFYGSSFMTDHHGSIVSDAGRHQETVLLHTYNLDEMRTA
RVQWGIFRDRRPDLYTSLITFDGGAGDVITQERRTPTNLPPPFSATPRVG
VGPAAVTVPGLSSTQKKVEPDTLVASQTMVPVVDEAQRRVVSNTFDLHEA
SFIGDVKASAQRRPRGRCWVCRAKTTYECKLCQPGPVPLCNRTARECWWK
YHAGEITQYVPNKRGRKRRKPEQHEVHTGEQHIPEESEEDGMANKQAEAE
AANVNALLG*
back to top

spliced messenger RNA

>Ggra1452.t1 ID=Ggra1452.t1|Name=Ggra1452.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=3480bp|location=Sequence derived from alignment at tig00000844_pilon:124612..130899+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAAGTCGAATCCAGACCGTCCGTGCATAACAACGGATACTATGACAC
GACAAGGGACCTCGAATACGAAGTGCATGACAGAGATGCAGAGTACATGA
ATGGAGATGGTTTTGCAGACGAACCAGAAGATGTATTTGACGAAGACGAA
GAGCCAATAACCGAAGAAGATGCTTGGACGGTAATTGCCTCCCATTTCAA
AACAAGAGGACTCGTCGGCCAGCAACTCGACTCGTACGATGTCTTCATGA
CAAACACCATGCAGGACCTTGTGGATCAAACACCGGACATAGAAATCATT
TCCGAAGATCAACACATGCCGGGTGAGATGGAGCAAGATACTGCAAAGCG
TGTAATCATAAGATTCGGACAGTTACGTATGGGTCGCCCATTTTTCCAAG
AATCTACAGGTGAAGCTCAACTGCTCTACCCCAATCAGGCTCGTCTAAGA
AACTTGACGTATGCATCTCCTTTGTACTGCGAGATATCAAAGACAGAACT
AGAAGTTCACCCTGACACGGGCGAAGAGGTTCACTTGGGCCAAGAGAACA
AAACAGTATTCTTTGGACGAGTTCCTCTGATGCTCCGGTCGAGGTACTGT
CTCCTTGCTGACTTGAAGACCGATAAGGAGCTTAACAAAATGGGCGAGTG
TCATGTTGATCAGGGTGGTTATTTTGTTATTAACGGTTCTGAAAAAGTGC
TTCTTGCTCAAGAACGAATGTCCACGAACCACTGTTTCGTCTTCGTCAGG
TCCCTCCCATCCACTTATTCTCATGTAGCTGAAGTTCGATCTGCATCTGA
GGCAAGCAATAGACCAACAACTTCTCTTCAAGTGAAGCTCAAGTCACGCG
GGAAAGGAAGGGATGGGCTCACTGGATCAACTATTCACTGTCAAATCCCA
AGTATACGTGAGGAGATACCTGTGGTAGTTTTGTTCCGCGCTCTAGGATG
CGCGAATGACAAAGAAGTCATGAGTCATATCTGCTACGATTTATCAGATG
AGGAACTCATGACTTCTGTCATGCCCTCAATAGAAGAAGCCCAGGACATT
CGCGACGTCTCAAGCGCCCTTGACTTTATAGGAAGAAGAGGGCCTGGAAA
GGGAGGTCTTTCTAGAGGAGACcgtataaaacagCTTTTGCGAAAGCTAA
TGAAGGACGTTAGAGCAAGCGCGAAGAGAATTATAAATGCAGGAGGCGAT
GTGGATCTTAATTCTCTGGTTAAGTCCTCCATTATTACGAATGGGCTTAA
ATACGCTCTCTCTACCGGCAATTGGAACTCAGCAGGCGGTGCTCCGACAA
AGACTGGGGTTTCCCAAGTGCTCAACCGCCTGACATTTGCATCCTCCCTG
TCTCATCTTCGAAGAATGAATTCGCCCATTGGGAGAGAAGGAAAGCTGGC
AAAGCCTCGGCAGCTTCACAATACTCACTGGGGCATGATATGTCCAGCCG
AAACTCCTGAAGGGCAGGCATGTGGGCTAGTTAAGAACCTGGCTTTAATG
GCCTACATTTCTGTAGGGTCGCAAGCTGCACCGCGTCTTAAGCACATGGT
GGATGACAAGATACATTCAAGGTCAAATGGCCCAGTAACTTTGTTGACTA
GGCAACCCCTCGAAGGTCGAGCAAGAGGAGGTGGGTTGCGATTTGGAGAA
ATGGAGCGCGATTGTCTTATTTCGCACGGCGGGGCAAACTTTCTTCGGGA
GCGTCTCATGGACATGAGCGACAAATACAGAGTTCATGTGTGTGACATAT
GTGGTCTCATTGCAATTGCAGATCTGCGAAAGAATACTTTCCACTGCCGA
AATTGCAATAACAGCACAGCTATTAGCCAGGTGTACATCCCGTACGCTTG
CAAACTGCTCTTCCAGGAGTTGATGGCAATGTCGGTGGCTCCCCGGCTCA
TGGTCAAAAAGGAAGAGCCACCGAAGAAGAAGCGGAATAGGGCGGTACCG
TCGAGGGCTTTCGGCAACGCCATCGCGTCACTCTCCTTCGCGCGGCCGCG
GTTCATGGCCAGCGCCGCCACAGTGGCGGCAGCTGCCGTCGCCACCGCTC
CCCAGCGTGTCATCACCGTTGCCGCTATCCAATTCTCCTGCACCAATGAC
ATAGAGTCTAACTGTCGTCGCGCCGAGAGCCTTGTTCGTGATGCCGTGCG
CAAGGGTGCTAACATTGTCCTCCTCCAGGAACTTTTTGCTACTCTATACT
TTCCGATCGATCAGATGGATTACGCTCGCCTTGCTGTGTCTCTGGACGAT
GAGAAGTCCTACATTTTGCGTTTCCAGAGCCTTGCGCGTGAGCTCAGCGT
TGTGCTTCCTATCAGCTTCTATGAGCGTTCTAACAACGCATACTTCAATT
CCGTTGTAGTCGTTGACGCAGATGGTAGCCAGCTAGGTCTCTATAGAAAA
TCCCATATTCCAGATGGCCCAGGCTATCAAGAAAAGTTCTACTTTACTCC
TGGAGATACCGGGTTCCGAACTTTCAAAACGCGCTTCGCCACCATCGGCA
TCGGAATTTGTTGGGACCAGTGGTTTCCAGAGGCTGCGCGATGCATGGCA
ATCAAAGGTGCTGAGCTCTTGCTTTATCCGACAGCAATAGGTTCCGAGCC
TCAAGACCCCGCTCTAGACACCTGTTCCCAATGGCAAAAATGTATGCAAG
GACATGCCGCTGCGAATATGGTTCCAGTTATTGCTGCAAACCGTGTTGGC
AAAGAACTCGGTGTATCGTCTGACATATCGATCACGTTTTACGGTTCATC
GTTTATGACCGATCACCATGGGTCCATTGTATCAGACGCTGGCCGTCATC
AAGAGACGGTGCTCTTGCACACCTACAATCTTGATGAAATGCGAACAGCT
CGAGTACAGTGGGGTATTTTCCGTGATCGCAGACCAGATCTGTATACATC
CCTTATCACATTTGACGGGGGAGCAGGTGATGTTATAACTCAGGAGCGGC
GCACCCCTACCAACCTGCCCCCTCCTTTCTCGGCCACTCCCCGCGTGGGT
GTAGGACCAGCCGCCGTCACGGTTCCTGGTCTATCATCAACTCAGAAGAA
AGTGGAACCCGACACTCTTGTCGCTTCTCAGACCATGGTACCCGTCGTGG
ATGAAGCTCAAAGGAGGGTCGTGAGCAACACCTTCGATTTACATGAGGCG
TCATTTATTGGAGATGTGAAGGCGAGCGCTCAGCGAAGGCCACGAGGTCG
GTGCTGGGTTTGTCGCGCAAAAACAACTTATGAATGCAAGCTCTGTCAAC
CTGGACCTGTACCTCTCTGCAACCGCACAGCTCGGGAGTGTTGGTGGAAG
TATCACGCAGGTGAGATCACCCAATATGTTCCAAACAAGCGTGGCAGAAA
ACGGCGGAAGCCCGAACAGCACGAAGTACATACAGGAGAGCAGCATATTC
CGGAAGAAAGCGAAGAAGATGGAATGGCGAACAAACAAGCCGAAGCTGAA
GCAGCGAACGTGAACGCGTTGTTAGGATAA
back to top

protein sequence of Ggra1452.t1

>Ggra1452.t1 ID=Ggra1452.t1|Name=Ggra1452.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1160bp
MQVESRPSVHNNGYYDTTRDLEYEVHDRDAEYMNGDGFADEPEDVFDEDE
EPITEEDAWTVIASHFKTRGLVGQQLDSYDVFMTNTMQDLVDQTPDIEII
SEDQHMPGEMEQDTAKRVIIRFGQLRMGRPFFQESTGEAQLLYPNQARLR
NLTYASPLYCEISKTELEVHPDTGEEVHLGQENKTVFFGRVPLMLRSRYC
LLADLKTDKELNKMGECHVDQGGYFVINGSEKVLLAQERMSTNHCFVFVR
SLPSTYSHVAEVRSASEASNRPTTSLQVKLKSRGKGRDGLTGSTIHCQIP
SIREEIPVVVLFRALGCANDKEVMSHICYDLSDEELMTSVMPSIEEAQDI
RDVSSALDFIGRRGPGKGGLSRGDRIKQLLRKLMKDVRASAKRIINAGGD
VDLNSLVKSSIITNGLKYALSTGNWNSAGGAPTKTGVSQVLNRLTFASSL
SHLRRMNSPIGREGKLAKPRQLHNTHWGMICPAETPEGQACGLVKNLALM
AYISVGSQAAPRLKHMVDDKIHSRSNGPVTLLTRQPLEGRARGGGLRFGE
MERDCLISHGGANFLRERLMDMSDKYRVHVCDICGLIAIADLRKNTFHCR
NCNNSTAISQVYIPYACKLLFQELMAMSVAPRLMVKKEEPPKKKRNRAVP
SRAFGNAIASLSFARPRFMASAATVAAAAVATAPQRVITVAAIQFSCTND
IESNCRRAESLVRDAVRKGANIVLLQELFATLYFPIDQMDYARLAVSLDD
EKSYILRFQSLARELSVVLPISFYERSNNAYFNSVVVVDADGSQLGLYRK
SHIPDGPGYQEKFYFTPGDTGFRTFKTRFATIGIGICWDQWFPEAARCMA
IKGAELLLYPTAIGSEPQDPALDTCSQWQKCMQGHAAANMVPVIAANRVG
KELGVSSDISITFYGSSFMTDHHGSIVSDAGRHQETVLLHTYNLDEMRTA
RVQWGIFRDRRPDLYTSLITFDGGAGDVITQERRTPTNLPPPFSATPRVG
VGPAAVTVPGLSSTQKKVEPDTLVASQTMVPVVDEAQRRVVSNTFDLHEA
SFIGDVKASAQRRPRGRCWVCRAKTTYECKLCQPGPVPLCNRTARECWWK
YHAGEITQYVPNKRGRKRRKPEQHEVHTGEQHIPEESEEDGMANKQAEAE
AANVNALLG*
back to top

mRNA from alignment at tig00000844_pilon:124612..130899+

Legend: start_codonpolypeptideCDSexonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1452.t1 ID=Ggra1452.t1|Name=Ggra1452.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=6288bp|location=Sequence derived from alignment at tig00000844_pilon:124612..130899+ (Gracilaria gracilis GNS1m male)
ATGCAAGTCGAATCCAGACCGTCCGTGCATAACAACGGATACTATGACAC
GACAAGGGACCTCGAATACGAAGTGCATGACAGAGATGCAGAGTACATGA
ATGGAGATGGTTTTGCAGACGAACCAGAAGATGTATTTGACGAAGACGAA
GAGCCAATAACCGAAGAAGATGCTTGGACGGTAATTGCCTCCCATTTCAA
AACAAGAGGACTCGTCGGCCAGCAACTCGACTCGTACGATGTCTTCATGA
CAAACACCATGCAGGTAAGGCTCGAATGACGAACTTAACCGAGCTCTAGA
CAAACGCATGATGCTACTGCAATACAATTACTGACGCTCTATCCGTTCGT
CAACCCGTTCATTATTGTTTTTCCTCTCACAGGACCTTGTGGATCAAACA
CCGGACATAGAAATCATTTCCGAAGATCAACACATGCCGGGTGAGATGGA
GCAAGATACTGCAAAGCGTGTAATCATAAGATTCGGACAGTTACGTATGG
GTCGCCCATTTTTCCAAGAATCTACAGGTGAAGCTCAACTGCTCTACCCC
AATCAGGCTCGTCTAAGAAACTTGACGTATGCATCTCCTTTGTACTGCGA
GATATCAAAGACAGAACTAGAAGTTCACCCTGACACGGGCGAAGAGGTTC
ACTTGGGCCAAGAGAACAAAACAGTATTCTTTGGACGAGTTCCTCTGATG
CTCCGGTCGAGGTACTGTCTCCTTGCTGACTTGAAGACCGATAAGGAGCT
TAACAAAATGGGCGAGTGTCATGTTGATCAGGGTGGTTATTTTGTTATTA
ACGGTTCTGAAAAAGTGCTTCTTGCTCAAGAACGAATGTCCACGAACCAC
TGTTTCGTCTTCGTCAGGTCCCTCCCATCCACTTATTCTCATGTAGCTGA
AGTTCGATCTGCATCTGAGGCAAGCAATAGACCAACAACTTCTCTTCAAG
TGAAGCTCAAGTCACGCGGGAAAGGAAGGGATGGGCTCACTGGATCAACT
ATTCACTGTCAAATCCCAAGTATACGTGAGGAGATACCTGTGGTAGTTTT
GTTCCGCGCTCTAGGATGCGCGAATGACAAAGAAGTCATGAGTCATATCT
GCTACGATTTATCAGATGAGGAACTCATGACTTCTGTCATGCCCTCAATA
GAAGAAGCCCAGGACATTCGCGACGTCTCAAGCGCCCTTGACTTTATAGG
AAGAAGAGGGCCTGGAAAGGGAGGTCTTTCTAGAGGAGACcgtataaagt
acggaagagacgttctacaactggagcttctccctcatatcggaactgaa
ccaggatctgaaatgaaaaagtcctactatttggggtacatggtgaacaa
actgcttcatgtagcactcggtagacagcgcgaagatgaccgtgatcatt
acggtaacaaaaggttggatctggcgggaccactgctgactactttattc
agacagCTTTTGCGAAAGCTAATGAAGGACGTTAGAGCAAGCGCGAAGAG
AATTATAAATGCAGGAGGCGATGTGGATCTTAATTCTCTGGTTAAGTCCT
CCATTATTACGAATGGGCTTAAATACGCTCTCTCTACCGGCAATTGGAAC
TCAGCAGGCGGTGCTCCGACAAAGACTGGGGTTTCCCAAGTGCTCAACCG
CCTGACATTTGCATCCTCCCTGTCTCATCTTCGAAGAATGAATTCGCCCA
TTGGGAGAGAAGGAAAGCTGGCAAAGCCTCGGCAGCTTCACAATACTCAC
TGGGGCATGATATGTCCAGCCGAAACTCCTGAAGGGCAGGCATGTGGGCT
AGTTAAGAACCTGGCTTTAATGGCCTACATTTCTGTAGGGTCGCAAGCTG
CACCGGTACAAATCTTTCTCGAGGAGTGGAGCACACACCAGCTTATGgag
attgctcccggtcaagttgctagagcgacgaaggtgttcgtcaacggagc
atgggtgggtatccatcacagagcggaaggtctggctgatacgttgcgaa
gcttaagacggaaaggagacataaacttcgaagtttctattgtaatggat
catcaacggcgagaactacggatttataccgatgcaggtcgtataagccg
gcctttgtttgtcgttgaacagaacaagaaacaagatgagcatgggtggc
gcaaatcgcagctcaaaattcgcaagcggcatgtacttgcccttgctagt
gcagaagatgaggacagtccagaatttgacccagatatccgcgcatttca
tagcttactagttctggggctcatcgaatatgtagattgtgaggaggagg
aaacaatcatgattgccatgttaatgagtgacttggaaaagagaaaccat
tcggcacagtacacgcattgtgagatccatccggcaatgattcttggcgt
ttgtgggtcaatcatcccctttccagaccacaatcaaagtcctcgtaata
cgtaccaatcggcaatgggaaagcaggcaatgggtgtttacataacgaac
ttcagtctcagaatggatacacaggctcacgtattgtactatccgcagaa
gccactagtgtgtacgcgtgcgatgcagcatttgaaatttcgggccttgc
cttcaggtatcaacgcagttgtcgccatcgcttgttattctggttacaac
caggaagattctgtcattatgtctcagtctggaattgatcggggactgtt
tcgatccgtctacttcagaagtttccgtgacgaagaaaagagacatcttg
caggccttcaagaaagatttgaagtgcccaatatgcacgattgtttgggg
gttaaacctggggcatatgacaaacttgatgcggatggtctggtatgtga
aggaactcgcattgatggaaatgatattcttgttggcaaagttACTCCTT
TAGCTGAAGTTCCTGGAATGCAGCCGGGTATGCAAAGCGCAGCAGCACTt
gcgggcgcaaagacgaagaaggatctgtcccagggcgcgaaatcaaccga
gaacggtgtggtggacaaagtgctactggcaatgaacgaggagggtgcca
gatttgtttccgtaaggctgcgttctgtaagaaaacctcagattggagac
aagttctcatcaagacatggtcagaagggaacaatcggcattacgtacag
gcaagaagatatgcctttcacTTCAGAAGGTATtatcccagatatcattg
tcaatccacacgccattccatcccgaatgaccattgggcaactaattgaa
tgcttgctgggtaaAGTTTCTGCTATAAAGGGTACCGAAGGTGAtgctac
tccgttcactaatgttacagttgaagatattggaaagagtctattacaag
ctggttaccaaccacATGGGTGGGAGCTGATGCACAATGGACATACTGGA
AGGCCGCTAGAAGCGCACATATTCCTGGGTCCTACATATTACCAGCGTCT
TAAGCACATGGTGGATGACAAGATACATTCAAGGTCAAATGGCCCAGTAA
CTTTGTTGACTAGGCAACCCCTCGAAGGTCGAGCAAGAGGAGGTGGGTTG
CGATTTGGAGAAATGGAGCGCGATTGTCTTATTTCGCACGGCGGGTACGT
TTCTCTGCGACTCTTGACGTTTTGAAGGTGACGAAAAACTAACAGCTTTC
TCCTTGCATTACTTTGATCCGACAGGGCAAACTTTCTTCGGGAGCGTCTC
ATGGACATGAGCGACAAATACAGAGTTCATGTGTGTGACATATGTGGTCT
CATTGCAATTGCAGATCTGCGAAAGAATACTTTCCACTGCCGAAATTGCA
ATAACAGCACAGCTATTAGCCAGGTGTACATCCCGTACGCTTGCAAACTG
CTCTTCCAGGAGTTGATGGCAATGTCGGTGGCTCCCCGGCTCATGGTCAA
AAAGGAAGAGCCACCGAAGAAGAAGCGGAATAGGGCGGTACCGTCGTAAG
CAGTCTTCACTTCTTCAATCGTTCAAGTCGAAGGCGAAAGAAGCTCTCAA
GAACTTAACGGTAGTTGCATACATTCCATCGGCTGCGAAGTTTGAGCGTT
TCAAATTGAAGCCTTTAATGCACATAAAGAAGTACTTATCCCCCACTAAC
AGCAGTAGCGTTAGAATACCACCATCGTTCAGGGTGTCTTTAATACTGAA
TCAGTACTATTTCGTCCACTTCGCCATTTTGTTGGTTCTCCGGAAACCAG
CGAGATGAAGCAGTGGACGACCTGCGCGCCGCTGGCACTTCGCAAaggga
aagagagagacaggagagagagaagatagaATGAAAAAAGACTTGGCAAA
GGGCCCCGTGGATATCTACAGTAAAGTTTCTGTACACGGGTAAAACGCTA
CCGGTGCAGAGCTTACAAGGGTAGAACTGTTTGACTGGTGCTGTGCAAGG
CTCGAACTGTACAGTTGTCCGCATTTATTTGTGCCGGCCCAAAGCTGCAC
ACTCCAAGATTCACCAACGCCCAAACGCGGTCCAAACGCATCACAGTGGT
CTTCACCGGGGTTCGAGGTGGGTACCGCTTCTACGTCGCACGGACTCATC
GGGGCGAACACGGTTAGCCTTCCTCACGTTAGGAGGGCTTTCGGCAACGC
CATCGCGTCACTCTCCTTCGCGCGGCCGCGGTTCATGGCCAGCGCCGCCA
CAGTGGCGGCAGCTGCCGTCGCCACCGCTCCCCAGCGTGTCATCACCGTT
GCCGCTATCCAATTCTCCTGCACCAATGACATAGAGTCTAACTGTCGTCG
CGCCGAGAGCCTTGTTCGTGATGCCGTGCGCAAGGGTGCTAACATTGTCC
TCCTCCAGGAACTTTTTGCTACTCTATACTTTCCGATCGATCAGATGGAT
TACGCTCGCCTTGCTGTGTCTCTGGACGATGAGAAGTCCTACATTTTGCG
TTTCCAGAGCCTTGCGCGTGAGCTCAGCGTTGTGCTTCCTATCAGCTTCT
ATGAGCGTTCTAAGTAAGTTCGCATTCTGTTATGAAGGCATTCATTTCTT
ATCCTTTGAACCAACTCTTAGCCATCCCGCGCGACTTGTTGTTCCACTTA
AAGGCATCCTATTTTGTGGGCCCTTGCGTGGGCGGTATAGAACCCCATCG
ACACTAACCACTTTTGGACTTGCGTGTTTTCCTATTTTCAGCAACGCATA
CTTCAATTCCGTTGTAGTCGTTGACGCAGATGGTAGCCAGCTAGGTCTCT
ATAGAAAATCCCATATTCCAGATGGCCCAGGCTATCAAGAAAAGTTCTAC
TTTACTCCTGGAGATACCGGGTTCCGAACTTTCAAAACGCGCTTCGCCAC
CATCGGCATCGGAATTTGTTGGGACCAGTGGTTTCCAGAGGCTGCGCGAT
GCATGGCAATCAAAGGTGCTGAGCTCTTGCTTTATCCGACAGCAATAGGT
TCCGAGCCTCAAGACCCCGCTCTAGACACCTGTTCCCAATGGCAAAAATG
TATGCAAGGACATGCCGCTGCGAATATGGTTCCAGTTATTGCTGCAAACC
GTGTTGGCAAAGAACTCGGTGTATCGTCTGACATATCGATCACGTTTTAC
GGTTCATCGTTTATGACCGATCACCATGGGTCCATTGTATCAGACGCTGG
CCGTCATCAAGAGACGGTGCTCTTGCACACCTACAATCTTGATGAAATGC
GAACAGCTCGAGTACAGTGGGGTATTTTCCGTGATCGCAGACCAGATCTG
TATACATCCCTTATCACATTTGACGGGGGAGCAGGTGATGTTATAACTCA
GGAGCGGCGCACCCCTACCAACCTGCCCCCTCCTTTCTCGGCCACTCCCC
GCGTGGGTGTAGGACCAGCCGCCGTCACGGTTCCTGGTCTATCATCAACT
CAGAAGAAAGTGGAACCCGACACTCTTGTCGCTTCTCAGACCATGGTACC
CGTCGTGGATGAAGCTCAAAGGAGGGTCGTGAGCAACACCTTCGATTTAC
ATGAGGCGTCATTTATTGGAGATGTGAAGGCGAGCGCTCAGCGAAGGCCA
CGAGGTCGGTGCTGGGTTTGTCGCGCAAAAACAACTTATGAATGCAAGCT
CTGTCAACCTGGACCTGTACCTCTCTGCAACCGCACAGCTCGGGAGTGTT
GGTGGAAGTATCACGCAGGTGAGATCACCCAATATGTTCCAAACAAGCGT
GGCAGAAAACGGCGGAAGCCCGAACAGCACGAAGTACATACAGGAGAGCA
GCATATTCCGGAAGAAAGCGAAGAAGATGGAATGGCGAACAAACAAGCCG
AAGCTGAAGCAGCGAACGTGAACGCGTTGTTAGGATAA
back to top

Coding sequence (CDS) from alignment at tig00000844_pilon:124612..130899+

>Ggra1452.t1 ID=Ggra1452.t1|Name=Ggra1452.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=3480bp|location=Sequence derived from alignment at tig00000844_pilon:124612..130899+ (Gracilaria gracilis GNS1m male)
ATGCAAGTCGAATCCAGACCGTCCGTGCATAACAACGGATACTATGACAC
GACAAGGGACCTCGAATACGAAGTGCATGACAGAGATGCAGAGTACATGA
ATGGAGATGGTTTTGCAGACGAACCAGAAGATGTATTTGACGAAGACGAA
GAGCCAATAACCGAAGAAGATGCTTGGACGGTAATTGCCTCCCATTTCAA
AACAAGAGGACTCGTCGGCCAGCAACTCGACTCGTACGATGTCTTCATGA
CAAACACCATGCAGGACCTTGTGGATCAAACACCGGACATAGAAATCATT
TCCGAAGATCAACACATGCCGGGTGAGATGGAGCAAGATACTGCAAAGCG
TGTAATCATAAGATTCGGACAGTTACGTATGGGTCGCCCATTTTTCCAAG
AATCTACAGGTGAAGCTCAACTGCTCTACCCCAATCAGGCTCGTCTAAGA
AACTTGACGTATGCATCTCCTTTGTACTGCGAGATATCAAAGACAGAACT
AGAAGTTCACCCTGACACGGGCGAAGAGGTTCACTTGGGCCAAGAGAACA
AAACAGTATTCTTTGGACGAGTTCCTCTGATGCTCCGGTCGAGGTACTGT
CTCCTTGCTGACTTGAAGACCGATAAGGAGCTTAACAAAATGGGCGAGTG
TCATGTTGATCAGGGTGGTTATTTTGTTATTAACGGTTCTGAAAAAGTGC
TTCTTGCTCAAGAACGAATGTCCACGAACCACTGTTTCGTCTTCGTCAGG
TCCCTCCCATCCACTTATTCTCATGTAGCTGAAGTTCGATCTGCATCTGA
GGCAAGCAATAGACCAACAACTTCTCTTCAAGTGAAGCTCAAGTCACGCG
GGAAAGGAAGGGATGGGCTCACTGGATCAACTATTCACTGTCAAATCCCA
AGTATACGTGAGGAGATACCTGTGGTAGTTTTGTTCCGCGCTCTAGGATG
CGCGAATGACAAAGAAGTCATGAGTCATATCTGCTACGATTTATCAGATG
AGGAACTCATGACTTCTGTCATGCCCTCAATAGAAGAAGCCCAGGACATT
CGCGACGTCTCAAGCGCCCTTGACTTTATAGGAAGAAGAGGGCCTGGAAA
GGGAGGTCTTTCTAGAGGAGACcgtataaaacagCTTTTGCGAAAGCTAA
TGAAGGACGTTAGAGCAAGCGCGAAGAGAATTATAAATGCAGGAGGCGAT
GTGGATCTTAATTCTCTGGTTAAGTCCTCCATTATTACGAATGGGCTTAA
ATACGCTCTCTCTACCGGCAATTGGAACTCAGCAGGCGGTGCTCCGACAA
AGACTGGGGTTTCCCAAGTGCTCAACCGCCTGACATTTGCATCCTCCCTG
TCTCATCTTCGAAGAATGAATTCGCCCATTGGGAGAGAAGGAAAGCTGGC
AAAGCCTCGGCAGCTTCACAATACTCACTGGGGCATGATATGTCCAGCCG
AAACTCCTGAAGGGCAGGCATGTGGGCTAGTTAAGAACCTGGCTTTAATG
GCCTACATTTCTGTAGGGTCGCAAGCTGCACCGCGTCTTAAGCACATGGT
GGATGACAAGATACATTCAAGGTCAAATGGCCCAGTAACTTTGTTGACTA
GGCAACCCCTCGAAGGTCGAGCAAGAGGAGGTGGGTTGCGATTTGGAGAA
ATGGAGCGCGATTGTCTTATTTCGCACGGCGGGGCAAACTTTCTTCGGGA
GCGTCTCATGGACATGAGCGACAAATACAGAGTTCATGTGTGTGACATAT
GTGGTCTCATTGCAATTGCAGATCTGCGAAAGAATACTTTCCACTGCCGA
AATTGCAATAACAGCACAGCTATTAGCCAGGTGTACATCCCGTACGCTTG
CAAACTGCTCTTCCAGGAGTTGATGGCAATGTCGGTGGCTCCCCGGCTCA
TGGTCAAAAAGGAAGAGCCACCGAAGAAGAAGCGGAATAGGGCGGTACCG
TCGAGGGCTTTCGGCAACGCCATCGCGTCACTCTCCTTCGCGCGGCCGCG
GTTCATGGCCAGCGCCGCCACAGTGGCGGCAGCTGCCGTCGCCACCGCTC
CCCAGCGTGTCATCACCGTTGCCGCTATCCAATTCTCCTGCACCAATGAC
ATAGAGTCTAACTGTCGTCGCGCCGAGAGCCTTGTTCGTGATGCCGTGCG
CAAGGGTGCTAACATTGTCCTCCTCCAGGAACTTTTTGCTACTCTATACT
TTCCGATCGATCAGATGGATTACGCTCGCCTTGCTGTGTCTCTGGACGAT
GAGAAGTCCTACATTTTGCGTTTCCAGAGCCTTGCGCGTGAGCTCAGCGT
TGTGCTTCCTATCAGCTTCTATGAGCGTTCTAACAACGCATACTTCAATT
CCGTTGTAGTCGTTGACGCAGATGGTAGCCAGCTAGGTCTCTATAGAAAA
TCCCATATTCCAGATGGCCCAGGCTATCAAGAAAAGTTCTACTTTACTCC
TGGAGATACCGGGTTCCGAACTTTCAAAACGCGCTTCGCCACCATCGGCA
TCGGAATTTGTTGGGACCAGTGGTTTCCAGAGGCTGCGCGATGCATGGCA
ATCAAAGGTGCTGAGCTCTTGCTTTATCCGACAGCAATAGGTTCCGAGCC
TCAAGACCCCGCTCTAGACACCTGTTCCCAATGGCAAAAATGTATGCAAG
GACATGCCGCTGCGAATATGGTTCCAGTTATTGCTGCAAACCGTGTTGGC
AAAGAACTCGGTGTATCGTCTGACATATCGATCACGTTTTACGGTTCATC
GTTTATGACCGATCACCATGGGTCCATTGTATCAGACGCTGGCCGTCATC
AAGAGACGGTGCTCTTGCACACCTACAATCTTGATGAAATGCGAACAGCT
CGAGTACAGTGGGGTATTTTCCGTGATCGCAGACCAGATCTGTATACATC
CCTTATCACATTTGACGGGGGAGCAGGTGATGTTATAACTCAGGAGCGGC
GCACCCCTACCAACCTGCCCCCTCCTTTCTCGGCCACTCCCCGCGTGGGT
GTAGGACCAGCCGCCGTCACGGTTCCTGGTCTATCATCAACTCAGAAGAA
AGTGGAACCCGACACTCTTGTCGCTTCTCAGACCATGGTACCCGTCGTGG
ATGAAGCTCAAAGGAGGGTCGTGAGCAACACCTTCGATTTACATGAGGCG
TCATTTATTGGAGATGTGAAGGCGAGCGCTCAGCGAAGGCCACGAGGTCG
GTGCTGGGTTTGTCGCGCAAAAACAACTTATGAATGCAAGCTCTGTCAAC
CTGGACCTGTACCTCTCTGCAACCGCACAGCTCGGGAGTGTTGGTGGAAG
TATCACGCAGGTGAGATCACCCAATATGTTCCAAACAAGCGTGGCAGAAA
ACGGCGGAAGCCCGAACAGCACGAAGTACATACAGGAGAGCAGCATATTC
CGGAAGAAAGCGAAGAAGATGGAATGGCGAACAAACAAGCCGAAGCTGAA
GCAGCGAACGTGAACGCGTTGTTAGGATAA
back to top