Ggra1414.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1414.t1
Unique NameGgra1414.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length137
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:14922..15332 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1414Ggra1414Gracilaria gracilis GNS1m malegenetig00000844_pilon 14922..15332 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1414.t1.start1Ggra1414.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000844_pilon 14922..14924 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1414.t1.CDS1Ggra1414.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000844_pilon 14922..15332 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1414.t1.exon1Ggra1414.t1.exon1Gracilaria gracilis GNS1m maleexontig00000844_pilon 14922..15332 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1414.t1.stop1Ggra1414.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000844_pilon 15330..15332 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1414.t1Ggra1414.t1Gracilaria gracilis GNS1m malepolypeptidetig00000844_pilon 14922..15332 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1414.t1 ID=Ggra1414.t1|Name=Ggra1414.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=137bp
MALRPSLGTRGELRRIAAEAEAATIDRVRPWCRTTQSCRLAPHVIVPQWI
RYDHPPSPKEQAPEVNECQMIVQETIDALLEAASSRKTERSFRRGRARWR
LRSGPDEGEEESVGEGAEAPERTSHAGSFMEPQPTS*
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spliced messenger RNA

>Ggra1414.t1 ID=Ggra1414.t1|Name=Ggra1414.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=411bp|location=Sequence derived from alignment at tig00000844_pilon:14922..15332+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCACTGCGACCATCCCTCGGAACTCGTGGAGAACTTCGACGTATTGC
TGCAGAAGCAGAAGCAGCCACCATTGACCGTGTTCGCCCGTGGTGCAGGA
CAACTCAGTCGTGCCGACTGGCACCGCACGTCATTGTGCCACAGTGGATT
CGTTACGACCATCCGCCTTCACCAAAGGAACAAGCACCCGAGGTGAACGA
ATGCCAGATGATTGTACAAGAAACTATTGACGCTTTGCTTGAAGCAGCTA
GCTCGAGAAAGACCGAGCGCAGTTTCCGTCGAGGTCGTGCGCGCTGGCGA
TTACGAAGTGGACCAGACGAAGGTGAAGAGGAAAGCGTCGGAGAAGGAGC
AGAAGCGCCTGAGCGGACTTCGCATGCCGGCTCATTCATGGAACCACAAC
CAACGAGCTAA
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protein sequence of Ggra1414.t1

>Ggra1414.t1 ID=Ggra1414.t1|Name=Ggra1414.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=137bp
MALRPSLGTRGELRRIAAEAEAATIDRVRPWCRTTQSCRLAPHVIVPQWI
RYDHPPSPKEQAPEVNECQMIVQETIDALLEAASSRKTERSFRRGRARWR
LRSGPDEGEEESVGEGAEAPERTSHAGSFMEPQPTS*
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mRNA from alignment at tig00000844_pilon:14922..15332+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1414.t1 ID=Ggra1414.t1|Name=Ggra1414.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=411bp|location=Sequence derived from alignment at tig00000844_pilon:14922..15332+ (Gracilaria gracilis GNS1m male)
ATGGCACTGCGACCATCCCTCGGAACTCGTGGAGAACTTCGACGTATTGC
TGCAGAAGCAGAAGCAGCCACCATTGACCGTGTTCGCCCGTGGTGCAGGA
CAACTCAGTCGTGCCGACTGGCACCGCACGTCATTGTGCCACAGTGGATT
CGTTACGACCATCCGCCTTCACCAAAGGAACAAGCACCCGAGGTGAACGA
ATGCCAGATGATTGTACAAGAAACTATTGACGCTTTGCTTGAAGCAGCTA
GCTCGAGAAAGACCGAGCGCAGTTTCCGTCGAGGTCGTGCGCGCTGGCGA
TTACGAAGTGGACCAGACGAAGGTGAAGAGGAAAGCGTCGGAGAAGGAGC
AGAAGCGCCTGAGCGGACTTCGCATGCCGGCTCATTCATGGAACCACAAC
CAACGAGCTAA
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Coding sequence (CDS) from alignment at tig00000844_pilon:14922..15332+

>Ggra1414.t1 ID=Ggra1414.t1|Name=Ggra1414.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=411bp|location=Sequence derived from alignment at tig00000844_pilon:14922..15332+ (Gracilaria gracilis GNS1m male)
ATGGCACTGCGACCATCCCTCGGAACTCGTGGAGAACTTCGACGTATTGC
TGCAGAAGCAGAAGCAGCCACCATTGACCGTGTTCGCCCGTGGTGCAGGA
CAACTCAGTCGTGCCGACTGGCACCGCACGTCATTGTGCCACAGTGGATT
CGTTACGACCATCCGCCTTCACCAAAGGAACAAGCACCCGAGGTGAACGA
ATGCCAGATGATTGTACAAGAAACTATTGACGCTTTGCTTGAAGCAGCTA
GCTCGAGAAAGACCGAGCGCAGTTTCCGTCGAGGTCGTGCGCGCTGGCGA
TTACGAAGTGGACCAGACGAAGGTGAAGAGGAAAGCGTCGGAGAAGGAGC
AGAAGCGCCTGAGCGGACTTCGCATGCCGGCTCATTCATGGAACCACAAC
CAACGAGCTAA
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