Ggra1395.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1395.t1
Unique NameGgra1395.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length186
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:518308..518865 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1395Ggra1395Gracilaria gracilis GNS1m malegenetig00000092_pilon 518308..518865 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1395.t1.stop1Ggra1395.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000092_pilon 518308..518310 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1395.t1.CDS1Ggra1395.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000092_pilon 518308..518865 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1395.t1.exon1Ggra1395.t1.exon1Gracilaria gracilis GNS1m maleexontig00000092_pilon 518308..518865 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1395.t1.start1Ggra1395.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000092_pilon 518863..518865 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1395.t1Ggra1395.t1Gracilaria gracilis GNS1m malepolypeptidetig00000092_pilon 518308..518865 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1395.t1 ID=Ggra1395.t1|Name=Ggra1395.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=186bp
MDSNCVDGLHQCKVDIRETDADRGVPKPGVDLLPMGYVIVYSVVQGKAKE
YSEMCAAVVAAVFAGLIGVRTAWGLWQLHEFHRWATRSIEGLRCMGIEYK
PFRLKRVEEEWGIPRSDMRSADVADEIVVNEKSVGNQIMHGDVQCYVKFG
DMVALKSEENVGGPIGKNWMLRTVWDILVATIEPL*
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spliced messenger RNA

>Ggra1395.t1 ID=Ggra1395.t1|Name=Ggra1395.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=558bp|location=Sequence derived from alignment at tig00000092_pilon:518308..518865- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACAGCAATTGCGTCGACGGACTTCATCAGTGCAAAGTGGATATCCG
TGAGACGGACGCGGATCGCGGGGTACCGAAACCTGGTGTGGACTTACTTC
CAATGGGGTATGTGATTGTGTACAGCGTGGTGCAGGGAAAAGCAAAGGAG
TACTCGGAAATGTGTGCTGCTGTGGTGGCGGCTGTGTTTGCGGGGCTGAT
TGGCGTACGAACTGCGTGGGGACTGTGGCAACTGCACGAGTTTCACAGAT
GGGCAACGAGATCGATTGAGGGGCTGAGGTGTATGGGGATTGAATACAAA
CCGTTTCGTTTGAAGAGGGTAGAAGAGGAATGGGGAATACCAAGATCCGA
TATGCGGAGTGCGGATGTTGCAGATGAGATTGTGGTGAACGAGAAGAGTG
TGGGCAATCAGATTATGCACGGTGATGTACAGTGTTATGTGAAGTTTGGG
GACATGGTGGCACTGAAAAGCGAGGAGAACGTTGGAGGACCGATAGGGAA
GAATTGGATGTTGAGAACGGTGTGGGACATTTTGGTGGCGACGATAGAAC
CGTTGTGA
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protein sequence of Ggra1395.t1

>Ggra1395.t1 ID=Ggra1395.t1|Name=Ggra1395.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=186bp
MDSNCVDGLHQCKVDIRETDADRGVPKPGVDLLPMGYVIVYSVVQGKAKE
YSEMCAAVVAAVFAGLIGVRTAWGLWQLHEFHRWATRSIEGLRCMGIEYK
PFRLKRVEEEWGIPRSDMRSADVADEIVVNEKSVGNQIMHGDVQCYVKFG
DMVALKSEENVGGPIGKNWMLRTVWDILVATIEPL*
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mRNA from alignment at tig00000092_pilon:518308..518865-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1395.t1 ID=Ggra1395.t1|Name=Ggra1395.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=558bp|location=Sequence derived from alignment at tig00000092_pilon:518308..518865- (Gracilaria gracilis GNS1m male)
ATGGACAGCAATTGCGTCGACGGACTTCATCAGTGCAAAGTGGATATCCG
TGAGACGGACGCGGATCGCGGGGTACCGAAACCTGGTGTGGACTTACTTC
CAATGGGGTATGTGATTGTGTACAGCGTGGTGCAGGGAAAAGCAAAGGAG
TACTCGGAAATGTGTGCTGCTGTGGTGGCGGCTGTGTTTGCGGGGCTGAT
TGGCGTACGAACTGCGTGGGGACTGTGGCAACTGCACGAGTTTCACAGAT
GGGCAACGAGATCGATTGAGGGGCTGAGGTGTATGGGGATTGAATACAAA
CCGTTTCGTTTGAAGAGGGTAGAAGAGGAATGGGGAATACCAAGATCCGA
TATGCGGAGTGCGGATGTTGCAGATGAGATTGTGGTGAACGAGAAGAGTG
TGGGCAATCAGATTATGCACGGTGATGTACAGTGTTATGTGAAGTTTGGG
GACATGGTGGCACTGAAAAGCGAGGAGAACGTTGGAGGACCGATAGGGAA
GAATTGGATGTTGAGAACGGTGTGGGACATTTTGGTGGCGACGATAGAAC
CGTTGTGA
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Coding sequence (CDS) from alignment at tig00000092_pilon:518308..518865-

>Ggra1395.t1 ID=Ggra1395.t1|Name=Ggra1395.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=558bp|location=Sequence derived from alignment at tig00000092_pilon:518308..518865- (Gracilaria gracilis GNS1m male)
ATGGACAGCAATTGCGTCGACGGACTTCATCAGTGCAAAGTGGATATCCG
TGAGACGGACGCGGATCGCGGGGTACCGAAACCTGGTGTGGACTTACTTC
CAATGGGGTATGTGATTGTGTACAGCGTGGTGCAGGGAAAAGCAAAGGAG
TACTCGGAAATGTGTGCTGCTGTGGTGGCGGCTGTGTTTGCGGGGCTGAT
TGGCGTACGAACTGCGTGGGGACTGTGGCAACTGCACGAGTTTCACAGAT
GGGCAACGAGATCGATTGAGGGGCTGAGGTGTATGGGGATTGAATACAAA
CCGTTTCGTTTGAAGAGGGTAGAAGAGGAATGGGGAATACCAAGATCCGA
TATGCGGAGTGCGGATGTTGCAGATGAGATTGTGGTGAACGAGAAGAGTG
TGGGCAATCAGATTATGCACGGTGATGTACAGTGTTATGTGAAGTTTGGG
GACATGGTGGCACTGAAAAGCGAGGAGAACGTTGGAGGACCGATAGGGAA
GAATTGGATGTTGAGAACGGTGTGGGACATTTTGGTGGCGACGATAGAAC
CGTTGTGA
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