Ggra1386.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1386.t1
Unique NameGgra1386.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length326
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:498167..499144 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1386Ggra1386Gracilaria gracilis GNS1m malegenetig00000092_pilon 498167..499144 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1386.t1.stop1Ggra1386.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000092_pilon 498167..498169 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1386.t1.CDS1Ggra1386.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000092_pilon 498167..499144 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1386.t1.exon1Ggra1386.t1.exon1Gracilaria gracilis GNS1m maleexontig00000092_pilon 498167..499144 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1386.t1.start1Ggra1386.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000092_pilon 499142..499144 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1386.t1Ggra1386.t1Gracilaria gracilis GNS1m malepolypeptidetig00000092_pilon 498167..499144 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1386.t1 ID=Ggra1386.t1|Name=Ggra1386.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=326bp
MKVTVGHAVLFFVTILTLVRGRAFWSNSDDDKGLLNGINSLFSLKPASKV
LGGTTSSIKVAAVGKVTVSVNGKEFREVSSTAPQTIVLPLKKNDVIAFEA
EKTGQKAGLMAVVSWATTKYYTGEDRFTARTDFSTWEEEEQKVWKSALTF
VQKSTGAVRSFCHWDRADNMDIGGGIFDDKASYIWRLKSNPGGVNVPAGK
VYMRLVVGGENCGAPVHAEDEITFRRVPDPKEDSLGGQNDDEPSEGFCAC
KLTDERGGRCYDMDDTSAESGRCRPRPCDPKFECVISGEKICIKRRGGTK
LVMVAPNQCITVPAGDAEVLIPYEG*
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spliced messenger RNA

>Ggra1386.t1 ID=Ggra1386.t1|Name=Ggra1386.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=978bp|location=Sequence derived from alignment at tig00000092_pilon:498167..499144- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGGTCACCGTCGGACACGCTGTGCTTTTTTTTGTGACTATACTAAC
CCTGGTTCGTGGAAGGGCGTTCTGGAGCAACTCAGATGATGACAAGGGCT
TGCTTAACGGAATCAACTCGCTTTTTTCACTGAAACCTGCTTCAAAGGTA
CTGGGGGGTACAACGTCATCGATCAAAGTCGCTGCCGTTGGAAAGGTTAC
TGTAAGTGTCAATGGCAAGGAATTCCGAGAAGTATCATCCACAGCACCGC
AAACAATTGTGCTGCCACTCAAGAAGAACGATGTAATCGCTTTCGAGGCC
GAGAAAACTGGTCAGAAGGCGGGACTGATGGCCGTTGTCTCATGGGCTAC
TACAAAGTATTACACTGGCGAAGATCGCTTCACGGCCAGGACGGACTTTT
CTACATGGGAAGAAGAAGAGCAGAAGGTCTGGAAATCAGCTTTGACTTTC
GTGCAGAAAAGTACGGGGGCTGTTCGCAGTTTCTGTCATTGGGACCGTGC
GGATAACATGGACATTGGGGGTGGCATATTTGATGACAAGGCATCGTACA
TCTGGCGGTTGAAGTCAAACCCTGGCGGAGTGAATGTTCCGGCAGGAAAA
GTCTACATGCGTTTAGTGGTAGGCGGGGAGAACTGTGGCGCACCAGTGCA
TGCGGAGGATGAGATAACTTTCCGTAGAGTGCCGGATCCGAAGGAAGACT
CCCTGGGTGGGCAGAATGATGATGAGCCTTCTGAAGGGTTTTGTGCCTGC
AAGCTTACGGATGAAAGAGGTGGACGTTGTTACGATATGGATGATACCTC
AGCAGAAAGCGGGAGATGTCGTCCTCGTCCGTGTGACCCCAAGTTTGAAT
GTGTCATATCCGGCGAAAAGATATGTATCAAACGACGGGGTGGTACCAAG
TTAGTTATGGTGGCTCCTAATCAATGCATCACTGTCCCAGCTGGGGATGC
AGAAGTATTAATACCGTATGAAGGCTAG
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protein sequence of Ggra1386.t1

>Ggra1386.t1 ID=Ggra1386.t1|Name=Ggra1386.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=326bp
MKVTVGHAVLFFVTILTLVRGRAFWSNSDDDKGLLNGINSLFSLKPASKV
LGGTTSSIKVAAVGKVTVSVNGKEFREVSSTAPQTIVLPLKKNDVIAFEA
EKTGQKAGLMAVVSWATTKYYTGEDRFTARTDFSTWEEEEQKVWKSALTF
VQKSTGAVRSFCHWDRADNMDIGGGIFDDKASYIWRLKSNPGGVNVPAGK
VYMRLVVGGENCGAPVHAEDEITFRRVPDPKEDSLGGQNDDEPSEGFCAC
KLTDERGGRCYDMDDTSAESGRCRPRPCDPKFECVISGEKICIKRRGGTK
LVMVAPNQCITVPAGDAEVLIPYEG*
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mRNA from alignment at tig00000092_pilon:498167..499144-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1386.t1 ID=Ggra1386.t1|Name=Ggra1386.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=978bp|location=Sequence derived from alignment at tig00000092_pilon:498167..499144- (Gracilaria gracilis GNS1m male)
ATGAAGGTCACCGTCGGACACGCTGTGCTTTTTTTTGTGACTATACTAAC
CCTGGTTCGTGGAAGGGCGTTCTGGAGCAACTCAGATGATGACAAGGGCT
TGCTTAACGGAATCAACTCGCTTTTTTCACTGAAACCTGCTTCAAAGGTA
CTGGGGGGTACAACGTCATCGATCAAAGTCGCTGCCGTTGGAAAGGTTAC
TGTAAGTGTCAATGGCAAGGAATTCCGAGAAGTATCATCCACAGCACCGC
AAACAATTGTGCTGCCACTCAAGAAGAACGATGTAATCGCTTTCGAGGCC
GAGAAAACTGGTCAGAAGGCGGGACTGATGGCCGTTGTCTCATGGGCTAC
TACAAAGTATTACACTGGCGAAGATCGCTTCACGGCCAGGACGGACTTTT
CTACATGGGAAGAAGAAGAGCAGAAGGTCTGGAAATCAGCTTTGACTTTC
GTGCAGAAAAGTACGGGGGCTGTTCGCAGTTTCTGTCATTGGGACCGTGC
GGATAACATGGACATTGGGGGTGGCATATTTGATGACAAGGCATCGTACA
TCTGGCGGTTGAAGTCAAACCCTGGCGGAGTGAATGTTCCGGCAGGAAAA
GTCTACATGCGTTTAGTGGTAGGCGGGGAGAACTGTGGCGCACCAGTGCA
TGCGGAGGATGAGATAACTTTCCGTAGAGTGCCGGATCCGAAGGAAGACT
CCCTGGGTGGGCAGAATGATGATGAGCCTTCTGAAGGGTTTTGTGCCTGC
AAGCTTACGGATGAAAGAGGTGGACGTTGTTACGATATGGATGATACCTC
AGCAGAAAGCGGGAGATGTCGTCCTCGTCCGTGTGACCCCAAGTTTGAAT
GTGTCATATCCGGCGAAAAGATATGTATCAAACGACGGGGTGGTACCAAG
TTAGTTATGGTGGCTCCTAATCAATGCATCACTGTCCCAGCTGGGGATGC
AGAAGTATTAATACCGTATGAAGGCTAG
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Coding sequence (CDS) from alignment at tig00000092_pilon:498167..499144-

>Ggra1386.t1 ID=Ggra1386.t1|Name=Ggra1386.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=978bp|location=Sequence derived from alignment at tig00000092_pilon:498167..499144- (Gracilaria gracilis GNS1m male)
ATGAAGGTCACCGTCGGACACGCTGTGCTTTTTTTTGTGACTATACTAAC
CCTGGTTCGTGGAAGGGCGTTCTGGAGCAACTCAGATGATGACAAGGGCT
TGCTTAACGGAATCAACTCGCTTTTTTCACTGAAACCTGCTTCAAAGGTA
CTGGGGGGTACAACGTCATCGATCAAAGTCGCTGCCGTTGGAAAGGTTAC
TGTAAGTGTCAATGGCAAGGAATTCCGAGAAGTATCATCCACAGCACCGC
AAACAATTGTGCTGCCACTCAAGAAGAACGATGTAATCGCTTTCGAGGCC
GAGAAAACTGGTCAGAAGGCGGGACTGATGGCCGTTGTCTCATGGGCTAC
TACAAAGTATTACACTGGCGAAGATCGCTTCACGGCCAGGACGGACTTTT
CTACATGGGAAGAAGAAGAGCAGAAGGTCTGGAAATCAGCTTTGACTTTC
GTGCAGAAAAGTACGGGGGCTGTTCGCAGTTTCTGTCATTGGGACCGTGC
GGATAACATGGACATTGGGGGTGGCATATTTGATGACAAGGCATCGTACA
TCTGGCGGTTGAAGTCAAACCCTGGCGGAGTGAATGTTCCGGCAGGAAAA
GTCTACATGCGTTTAGTGGTAGGCGGGGAGAACTGTGGCGCACCAGTGCA
TGCGGAGGATGAGATAACTTTCCGTAGAGTGCCGGATCCGAAGGAAGACT
CCCTGGGTGGGCAGAATGATGATGAGCCTTCTGAAGGGTTTTGTGCCTGC
AAGCTTACGGATGAAAGAGGTGGACGTTGTTACGATATGGATGATACCTC
AGCAGAAAGCGGGAGATGTCGTCCTCGTCCGTGTGACCCCAAGTTTGAAT
GTGTCATATCCGGCGAAAAGATATGTATCAAACGACGGGGTGGTACCAAG
TTAGTTATGGTGGCTCCTAATCAATGCATCACTGTCCCAGCTGGGGATGC
AGAAGTATTAATACCGTATGAAGGCTAG
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