Ggra1376.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1376.t1
Unique NameGgra1376.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length176
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:432174..432701 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1376Ggra1376Gracilaria gracilis GNS1m malegenetig00000092_pilon 432174..432701 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1376.t1.stop1Ggra1376.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000092_pilon 432174..432176 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1376.t1.CDS1Ggra1376.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000092_pilon 432174..432701 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1376.t1.exon1Ggra1376.t1.exon1Gracilaria gracilis GNS1m maleexontig00000092_pilon 432174..432701 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1376.t1.start1Ggra1376.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000092_pilon 432699..432701 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1376.t1Ggra1376.t1Gracilaria gracilis GNS1m malepolypeptidetig00000092_pilon 432174..432701 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1376.t1 ID=Ggra1376.t1|Name=Ggra1376.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=176bp
MVHERREALETAISSCIRDTFQTEEARTKLSQACESLSLTDDACRTVLSD
FSQLVVSKALEQVTQWSQENDMPRKWDIIDRFATIAPAMAATMNENIALP
GDSVPQLKLTEQLIAQKKEELDKLQQIATQKHAMLDDVNRLLDEQENRTQ
NLTNNIDNSFTQCVQKLESCARAIN*
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spliced messenger RNA

>Ggra1376.t1 ID=Ggra1376.t1|Name=Ggra1376.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=528bp|location=Sequence derived from alignment at tig00000092_pilon:432174..432701- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTTCACGAACGAAGAGAGGCGCTTGAGACCGCTATCAGCTCCTGCAT
TCGCGACACCTTTCAAACTGAAGAAGCGCGCACCAAATTGAGTCAAGCTT
GCGAAAGCCTCAGTCTCACAGACGACGCTTGCCGAACCGTACTATCCGAT
TTCTCACAATTGGTAGTCTCGAAGGCGCTTGAGCAGGTAACCCAGTGGTC
GCAGGAAAACGACATGCCGCGAAAATGGGACATCATCGACCGATTCGCCA
CCATAGCACCGGCCATGGCAGCCACAATGAACGAGAACATCGCTTTGCCA
GGGGACTCGGTTCCTCAACTCAAACTCACAGAACAGCTTATCGCACAGAA
AAAAGAAGAACTTGATAAACTGCAACAGATTGCTACACAAAAGCATGCCA
TGCTCGACGACGTCAACCGATTGCTAGACGAGCAAGAGAATAGAACACAA
AACTTGACAAACAACATTGATAACTCATTTACACAATGCGTCCAAAAACT
AGAAAGTTGCGCCCGAGCTATCAACTGA
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protein sequence of Ggra1376.t1

>Ggra1376.t1 ID=Ggra1376.t1|Name=Ggra1376.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=176bp
MVHERREALETAISSCIRDTFQTEEARTKLSQACESLSLTDDACRTVLSD
FSQLVVSKALEQVTQWSQENDMPRKWDIIDRFATIAPAMAATMNENIALP
GDSVPQLKLTEQLIAQKKEELDKLQQIATQKHAMLDDVNRLLDEQENRTQ
NLTNNIDNSFTQCVQKLESCARAIN*
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mRNA from alignment at tig00000092_pilon:432174..432701-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1376.t1 ID=Ggra1376.t1|Name=Ggra1376.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=528bp|location=Sequence derived from alignment at tig00000092_pilon:432174..432701- (Gracilaria gracilis GNS1m male)
ATGGTTCACGAACGAAGAGAGGCGCTTGAGACCGCTATCAGCTCCTGCAT
TCGCGACACCTTTCAAACTGAAGAAGCGCGCACCAAATTGAGTCAAGCTT
GCGAAAGCCTCAGTCTCACAGACGACGCTTGCCGAACCGTACTATCCGAT
TTCTCACAATTGGTAGTCTCGAAGGCGCTTGAGCAGGTAACCCAGTGGTC
GCAGGAAAACGACATGCCGCGAAAATGGGACATCATCGACCGATTCGCCA
CCATAGCACCGGCCATGGCAGCCACAATGAACGAGAACATCGCTTTGCCA
GGGGACTCGGTTCCTCAACTCAAACTCACAGAACAGCTTATCGCACAGAA
AAAAGAAGAACTTGATAAACTGCAACAGATTGCTACACAAAAGCATGCCA
TGCTCGACGACGTCAACCGATTGCTAGACGAGCAAGAGAATAGAACACAA
AACTTGACAAACAACATTGATAACTCATTTACACAATGCGTCCAAAAACT
AGAAAGTTGCGCCCGAGCTATCAACTGA
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Coding sequence (CDS) from alignment at tig00000092_pilon:432174..432701-

>Ggra1376.t1 ID=Ggra1376.t1|Name=Ggra1376.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=528bp|location=Sequence derived from alignment at tig00000092_pilon:432174..432701- (Gracilaria gracilis GNS1m male)
ATGGTTCACGAACGAAGAGAGGCGCTTGAGACCGCTATCAGCTCCTGCAT
TCGCGACACCTTTCAAACTGAAGAAGCGCGCACCAAATTGAGTCAAGCTT
GCGAAAGCCTCAGTCTCACAGACGACGCTTGCCGAACCGTACTATCCGAT
TTCTCACAATTGGTAGTCTCGAAGGCGCTTGAGCAGGTAACCCAGTGGTC
GCAGGAAAACGACATGCCGCGAAAATGGGACATCATCGACCGATTCGCCA
CCATAGCACCGGCCATGGCAGCCACAATGAACGAGAACATCGCTTTGCCA
GGGGACTCGGTTCCTCAACTCAAACTCACAGAACAGCTTATCGCACAGAA
AAAAGAAGAACTTGATAAACTGCAACAGATTGCTACACAAAAGCATGCCA
TGCTCGACGACGTCAACCGATTGCTAGACGAGCAAGAGAATAGAACACAA
AACTTGACAAACAACATTGATAACTCATTTACACAATGCGTCCAAAAACT
AGAAAGTTGCGCCCGAGCTATCAACTGA
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