Ggra1363.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1363.t1
Unique NameGgra1363.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length352
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:370123..371178 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog296587.XP_002507819.1
PFAMsFructosamin_kin
Max annot lvl3041|Chlorophyta
KEGG koko:K15523
Evalue3.82e-92
EggNOG OGsCOG3001@1|root,KOG3021@2759|Eukaryota,37MIU@33090|Viridiplantae,34HD1@3041|Chlorophyta
EC2.7.1.172
DescriptionFructosamine kinase
COG categoryG
BRITEko00000,ko01000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1363Ggra1363Gracilaria gracilis GNS1m malegenetig00000092_pilon 370123..371178 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1363.t1.stop1Ggra1363.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000092_pilon 370123..370125 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1363.t1.CDS1Ggra1363.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000092_pilon 370123..371178 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1363.t1.exon1Ggra1363.t1.exon1Gracilaria gracilis GNS1m maleexontig00000092_pilon 370123..371178 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1363.t1.start1Ggra1363.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000092_pilon 371176..371178 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1363.t1Ggra1363.t1Gracilaria gracilis GNS1m malepolypeptidetig00000092_pilon 370123..371178 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1363.t1 ID=Ggra1363.t1|Name=Ggra1363.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=352bp
MGMKSAKLSRLPLWPGFVAGFSSFIPPVNLGGSNRLKTRSARVAMRGRSQ
VSATIATDEMSQVITDELQFGNITSMTRSGSSGWAVMHMITTDKGKRLFA
KVSREDVEMFEGEKEGLTAMMNTHTIRVPEVYRCGTLKGVHGSFIIMEAL
DLYSVYNQGQLGENLARMHLAEPTIKEAREGMFGFVVDNTLGPTPQPNGW
MDDWVEFFRERRLRHQFMLTNDSNLIRKGNELCSRLDELFEDVRGTIKPS
ILHGDLWSGNVNGLGGSAEPVIYDPASYFGHHEAEFGMSWCMELTSAFWD
SYRRLIPEAKGFKRRLKLYQLYHYLNHFNLFGGSYYNASERMIDQLLKGI
N*
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spliced messenger RNA

>Ggra1363.t1 ID=Ggra1363.t1|Name=Ggra1363.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1056bp|location=Sequence derived from alignment at tig00000092_pilon:370123..371178- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCATGAAGTCTGCCAAGCTCTCGCGTCTTCCGCTTTGGCCAGGATT
TGTTGCTGGCTTTTCCTCATTCATCCCTCCTGTCAACTTGGGAGGTTCGA
ATCGTTTGAAGACACGGTCAGCTCGCGTTGCGATGCGAGGACGGTCACAG
GTTTCCGCGACCATTGCCACAGATGAAATGTCTCAAGTCATAACCGATGA
GCTACAGTTCGGCAACATAACATCTATGACTCGGTCAGGTTCATCCGGCT
GGGCAGTCATGCATATGATAACCACTGACAAAGGAAAGCGGCTGTTTGCG
AAGGTTAGTCGAGAAGATGTGGAAATGTTTGAAGGCGAAAAGGAAGGTCT
TACTGCGATGATGAACACTCATACAATTCGCGTGCCAGAGGTGTACCGCT
GTGGAACCCTCAAAGGTGTTCACGGTTCCTTCATTATCATGGAAGCTCTG
GATTTGTATTCCGTCTACAATCAAGGTCAACTTGGAGAAAACCTGGCAAG
AATGCACCTTGCTGAGCCTACCATCAAAGAAGCAAGGGAAGGGATGTTTG
GGTTCGTTGTTGACAATACATTAGGGCCGACCCCGCAGCCAAACGGGTGG
ATGGATGATTGGGTAGAGTTCTTCCGTGAGAGGCGCCTTCGACATCAGTT
CATGCTTACAAACGATTCCAATCTAATAAGAAAGGGCAATGAGCTGTGTT
CCCGACTGGACGAATTATTTGAAGATGTGAGGGGAACGATAAAACCTAGC
ATCCTGCATGGAGACTTGTGGTCTGGTAATGTGAATGGTCTTGGTGGTTC
TGCTGAGCCGGTTATCTATGATCCTGCTTCGTACTTCGGGCATCACGAGG
CTGAGTTCGGAATGTCATGGTGTATGGAACTAACGTCAGCCTTTTGGGAT
TCTTACCGCAGGCTTATTCCAGAAGCAAAAGGTTTTAAGAGGCGGCTCAA
ACTGTATCAGCTTTACCACTATCTGAACCATTTCAACCTCTTTGGCGGTA
GTTACTACAACGCATCAGAACGTATGATTGACCAGCTCTTGAAGGGAATA
AATTGA
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protein sequence of Ggra1363.t1

>Ggra1363.t1 ID=Ggra1363.t1|Name=Ggra1363.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=352bp
MGMKSAKLSRLPLWPGFVAGFSSFIPPVNLGGSNRLKTRSARVAMRGRSQ
VSATIATDEMSQVITDELQFGNITSMTRSGSSGWAVMHMITTDKGKRLFA
KVSREDVEMFEGEKEGLTAMMNTHTIRVPEVYRCGTLKGVHGSFIIMEAL
DLYSVYNQGQLGENLARMHLAEPTIKEAREGMFGFVVDNTLGPTPQPNGW
MDDWVEFFRERRLRHQFMLTNDSNLIRKGNELCSRLDELFEDVRGTIKPS
ILHGDLWSGNVNGLGGSAEPVIYDPASYFGHHEAEFGMSWCMELTSAFWD
SYRRLIPEAKGFKRRLKLYQLYHYLNHFNLFGGSYYNASERMIDQLLKGI
N*
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mRNA from alignment at tig00000092_pilon:370123..371178-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1363.t1 ID=Ggra1363.t1|Name=Ggra1363.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1056bp|location=Sequence derived from alignment at tig00000092_pilon:370123..371178- (Gracilaria gracilis GNS1m male)
ATGGGCATGAAGTCTGCCAAGCTCTCGCGTCTTCCGCTTTGGCCAGGATT
TGTTGCTGGCTTTTCCTCATTCATCCCTCCTGTCAACTTGGGAGGTTCGA
ATCGTTTGAAGACACGGTCAGCTCGCGTTGCGATGCGAGGACGGTCACAG
GTTTCCGCGACCATTGCCACAGATGAAATGTCTCAAGTCATAACCGATGA
GCTACAGTTCGGCAACATAACATCTATGACTCGGTCAGGTTCATCCGGCT
GGGCAGTCATGCATATGATAACCACTGACAAAGGAAAGCGGCTGTTTGCG
AAGGTTAGTCGAGAAGATGTGGAAATGTTTGAAGGCGAAAAGGAAGGTCT
TACTGCGATGATGAACACTCATACAATTCGCGTGCCAGAGGTGTACCGCT
GTGGAACCCTCAAAGGTGTTCACGGTTCCTTCATTATCATGGAAGCTCTG
GATTTGTATTCCGTCTACAATCAAGGTCAACTTGGAGAAAACCTGGCAAG
AATGCACCTTGCTGAGCCTACCATCAAAGAAGCAAGGGAAGGGATGTTTG
GGTTCGTTGTTGACAATACATTAGGGCCGACCCCGCAGCCAAACGGGTGG
ATGGATGATTGGGTAGAGTTCTTCCGTGAGAGGCGCCTTCGACATCAGTT
CATGCTTACAAACGATTCCAATCTAATAAGAAAGGGCAATGAGCTGTGTT
CCCGACTGGACGAATTATTTGAAGATGTGAGGGGAACGATAAAACCTAGC
ATCCTGCATGGAGACTTGTGGTCTGGTAATGTGAATGGTCTTGGTGGTTC
TGCTGAGCCGGTTATCTATGATCCTGCTTCGTACTTCGGGCATCACGAGG
CTGAGTTCGGAATGTCATGGTGTATGGAACTAACGTCAGCCTTTTGGGAT
TCTTACCGCAGGCTTATTCCAGAAGCAAAAGGTTTTAAGAGGCGGCTCAA
ACTGTATCAGCTTTACCACTATCTGAACCATTTCAACCTCTTTGGCGGTA
GTTACTACAACGCATCAGAACGTATGATTGACCAGCTCTTGAAGGGAATA
AATTGA
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Coding sequence (CDS) from alignment at tig00000092_pilon:370123..371178-

>Ggra1363.t1 ID=Ggra1363.t1|Name=Ggra1363.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1056bp|location=Sequence derived from alignment at tig00000092_pilon:370123..371178- (Gracilaria gracilis GNS1m male)
ATGGGCATGAAGTCTGCCAAGCTCTCGCGTCTTCCGCTTTGGCCAGGATT
TGTTGCTGGCTTTTCCTCATTCATCCCTCCTGTCAACTTGGGAGGTTCGA
ATCGTTTGAAGACACGGTCAGCTCGCGTTGCGATGCGAGGACGGTCACAG
GTTTCCGCGACCATTGCCACAGATGAAATGTCTCAAGTCATAACCGATGA
GCTACAGTTCGGCAACATAACATCTATGACTCGGTCAGGTTCATCCGGCT
GGGCAGTCATGCATATGATAACCACTGACAAAGGAAAGCGGCTGTTTGCG
AAGGTTAGTCGAGAAGATGTGGAAATGTTTGAAGGCGAAAAGGAAGGTCT
TACTGCGATGATGAACACTCATACAATTCGCGTGCCAGAGGTGTACCGCT
GTGGAACCCTCAAAGGTGTTCACGGTTCCTTCATTATCATGGAAGCTCTG
GATTTGTATTCCGTCTACAATCAAGGTCAACTTGGAGAAAACCTGGCAAG
AATGCACCTTGCTGAGCCTACCATCAAAGAAGCAAGGGAAGGGATGTTTG
GGTTCGTTGTTGACAATACATTAGGGCCGACCCCGCAGCCAAACGGGTGG
ATGGATGATTGGGTAGAGTTCTTCCGTGAGAGGCGCCTTCGACATCAGTT
CATGCTTACAAACGATTCCAATCTAATAAGAAAGGGCAATGAGCTGTGTT
CCCGACTGGACGAATTATTTGAAGATGTGAGGGGAACGATAAAACCTAGC
ATCCTGCATGGAGACTTGTGGTCTGGTAATGTGAATGGTCTTGGTGGTTC
TGCTGAGCCGGTTATCTATGATCCTGCTTCGTACTTCGGGCATCACGAGG
CTGAGTTCGGAATGTCATGGTGTATGGAACTAACGTCAGCCTTTTGGGAT
TCTTACCGCAGGCTTATTCCAGAAGCAAAAGGTTTTAAGAGGCGGCTCAA
ACTGTATCAGCTTTACCACTATCTGAACCATTTCAACCTCTTTGGCGGTA
GTTACTACAACGCATCAGAACGTATGATTGACCAGCTCTTGAAGGGAATA
AATTGA
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