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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 6500.XP_005092970.1 |
| Preferred name | MAD1L1 |
| PFAMs | MAD |
| Max annot lvl | 33208|Metazoa |
| KEGG ko | ko:K06638 |
| KEGG Pathway | ko04110,ko04914,ko05203,map04110,map04914,map05203 |
| GOs | GO:0000070,GO:0000075,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000819,GO:0000922,GO:0002376,GO:0002520,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006996,GO:0007049,GO:0007059,GO:0007080,GO:0007088,GO:0007093,GO:0007094,GO:0007162,GO:0007275,GO:0007346,GO:0008150,GO:0008285,GO:0008608,GO:0009987,GO:0010564,GO:0010639,GO:0010948,GO:0010965,GO:0012505,GO:0015630,GO:0016043,GO:0022402,GO:0022407,GO:0022408,GO:0030071,GO:0030155,GO:0031577,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032879,GO:0032944,GO:0032945,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0042127,GO:0042129,GO:0042130,GO:0042802,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043515,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045786,GO:0045839,GO:0045841,GO:0045930,GO:0048285,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048538,GO:0048731,GO:0048732,GO:0048856,GO:0050000,GO:0050670,GO:0050672,GO:0050789,GO:0050794,GO:0050863,GO:0050865,GO:0050866,GO:0050868,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051249,GO:0051250,GO:0051276,GO:0051303,GO:0051310,GO:0051315,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060341,GO:0065007,GO:0070013,GO:0070663,GO:0070664,GO:0071173,GO:0071174,GO:0071840,GO:0072686,GO:0090235,GO:0098687,GO:0098813,GO:0140014,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1903037,GO:1903038,GO:1903047,GO:1905818,GO:1905819,GO:2000816,GO:2001251 |
| Evalue | 1.91e-15 |
| EggNOG OGs | KOG4593@1|root,KOG4593@2759|Eukaryota,395TD@33154|Opisthokonta,3BISS@33208|Metazoa,3CSDW@33213|Bilateria |
| Description | kinetochore binding |
| COG category | D |
| BRITE | ko00000,ko00001,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra1353.t1.start1 | Ggra1353.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000092_pilon 346697..346699 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra1353.t1.stop1 | Ggra1353.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000092_pilon 348920..348922 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra1353.t1 ID=Ggra1353.t1|Name=Ggra1353.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=742bp MDDDTAASPPDNAWLRVSDTIRSLQSDVRVLQDPAVRSALQTPPAAPRTP AELNAKIVALRTELSQREQKLKEEKEITLAARQRAARAEGELEALRRQND ETSSLHERAVSDATSRIEELETQLSEREASIRMQRLRHRDERERGRISDT SFASEREMLTTQVQVAEGKLKRLERELLAEKARNDAERKELKEKCDWAYG YAKRLQKEIEHLSSTRSSFGEFRDANTTDLRTKNVALESEVFRMRSQLRD ESVSRTRMGAKLAELEGENDRLRELCRNAQQNEEQSKFMNEEITLLRIQA SEEEQAVRNASALQSEKEELARLISALSPTGDAQEGIQILRSLADGAGGS KSADIAQRIAAQQYEVRIAEIEQEHSIKLLRLQGELDDCHRSMREMKNES IQLQEDKETASAQQKRSERGRRILQREVDHLKAALREIEEDEIGTTSQPE DSRLRRRVEDAEKMSSEYRSALASVEAELEKKRKQIGELRSRSIGEFESM PSRDQRLSRVRELKHQLDSEAGLRREAEKEVDKLNAQLKDIQGKMEELQA EYAMLPPDTSAPDYDPTKVKALHLVDNPLAKALRDYAMTSIEKRHRAREH LDKDVDMCDESNAEVTTLKMRLSQLQQENEQLSKDSKVGLRTKEIAMKKI EEVRGAVYHLFGWSMRLTGAKYTLGSLYAESPNELLEFGRNENGTFALME THYTNQLTEDIEEYVQKMNSIPGFLAQITMENLGKTTMMNV* back to topspliced messenger RNA >Ggra1353.t1 ID=Ggra1353.t1|Name=Ggra1353.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2226bp|location=Sequence derived from alignment at tig00000092_pilon:346697..348922+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGATGATGACACCGCGGCTTCGCCACCCGACAATGCGTGGCTTCGAGT GAGCGATACGATACGTTCCCTACAAAGCGATGTACGCGTTCTTCAGGATC CTGCCGTGCGTTCGGCCTTGCAGACACCCCCAGCTGCGCCACGTACACCT GCTGAACTCAACGCTAAGATTGTTGCACTGCGAACAGAGCTTAGCCAACG AGAACAGAAGCTAAAGGAGGAAAAAGAAATAACTCTAGCAGCCCGTCAAC GCGCTGCTAGAGCAGAGGGGGAGCTTGAGGCATTGCGACGTCAGAATGAC GAGACTTCATCTCTGCATGAACGTGCCGTTTCTGACGCTACTTCCCGCAT TGAAGAATTGGAGACTCAGCTTTCGGAAAGAGAAGCTAGTATCAGAATGC AGAGGCTGCGGCATCGTGACGAACGCGAGCGAGGCCGAATCTCTGATACA TCTTTTGCATCTGAAAGAGAGATGCTTACTACCCAGGTACAGGTCGCCGA AGGAAAGCTTAAACGTCTGGAACGCGAATTGCTGGCGGAAAAGGCTCGCA ATGATGCAGAGAGAAAAGAACTTAAGGAAAAGTGCGATTGGGCGTACGGC TATGCGAAGAGATTACAGAAAGAAATAGAGCATCTCTCAAGCACCCGGTC TTCCTTCGGCGAGTTCCGGGATGCAAACACGACAGACCTGCGGACCAAGA ACGTGGCTCTAGAATCAGAAGTTTTCCGAATGCGGTCTCAACTTCGTGAC GAGAGCGTCAGTCGTACTCGAATGGGAGCAAAACTCGCCGAACTGGAGGG TGAGAACGATCGACTTCGAGAGCTTTGCAGGAATGCGCAGCAGAATGAAG AGCAGTCAAAGTTTATGAACGAGGAAATTACTCTTCTACGTATTCAAGCT TCCGAAGAGGAGCAAGCTGTCCGGAACGCTTCGGCACTACAGAGTGAGAA AGAAGAACTTGCTCGTCTAATCTCCGCCCTATCTCCTACCGGTGATGCGC AAGAAGGTATTCAAATACTACGTTCTCTTGCTGACGGGGCGGGGGGCAGC AAGAGTGCTGATATCGCTCAGCGTATAGCAGCGCAGCAATATGAGGTTCG AATTGCAGAAATAGAACAAGAACATAGCATAAAGCTTTTGAGGTTACAGG GCGAGCTGGATGATTGTCATCGGAGCATGCGTGAAATGAAGAACGAAAGT ATTCAACTTCAGGAAGATAAAGAAACAGCTTCTGCACAGCAGAAACGCAG TGAACGCGGTCGACGGATTTTACAACGAGAAGTTGATCATCTCAAAGCGG CACTGCGTGAAATTGAAGAAGACGAGATTGGGACAACTTCTCAGCCGGAA GACAGTAGATTGCGGCGAAGGGTTGAAGATGCTGAAAAGATGTCATCAGA GTACAGGTCGGCGCTGGCAAGCGTTGAGGCAGAATTGGAAAAGAAACGGA AGCAAATCGGAGAGTTGAGGTCAAGGAGCATAGGAGAATTTGAATCCATG CCTTCGAGGGACCAGCGGTTATCCAGAGTACGGGAGCTGAAACATCAGTT GGATTCAGAAGCTGGTCTTAGACGGGAGGCTGAAAAGGAGGTGGACAAGT TAAATGCTCAACTGAAAGATATTCAGGGGAAAATGGAAGAACTTCAAGCT GAATATGCAATGCTTCCGCCTGATACGTCAGCTCCTGACTACGATCCCAC CAAAGTTAAAGCATTACACCTCGTTGATAATCCACTGGCAAAAGCTTTGC GGGACTATGCGATGACCTCAATCGAGAAAAGGCACAGAGCACGTGAGCAT TTGGATAAAGATGTGGATATGTGTGATGAAAGTAATGCAGAAGTAACGAC TTTGAAGATGAGATTGTCTCAGTTACAACAAGAGAATGAGCAACTTTCAA AAGATTCCAAGGTAGGACTGAGAACCAAAGAGATTGCAATGAAGAAGATC GAAGAGGTTCGGGGGGCTGTTTATCACTTGTTTGGATGGTCAATGAGATT GACAGGTGCAAAGTATACGCTTGGATCCCTGTATGCTGAAAGTCCGAATG AACTACTTGAGTTCGGGAGGAATGAGAATGGGACTTTTGCGCTGATGGAA ACTCATTATACGAACCAACTCACTGAGGACATTGAAGAATACGTGCAGAA AATGAACTCAATTCCTGGGTTTCTCGCGCAGATAACCATGGAGAATTTGG GGAAGACTACTATGATGAATGTGTGA back to topprotein sequence of Ggra1353.t1 >Ggra1353.t1 ID=Ggra1353.t1|Name=Ggra1353.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=742bp
MDDDTAASPPDNAWLRVSDTIRSLQSDVRVLQDPAVRSALQTPPAAPRTP AELNAKIVALRTELSQREQKLKEEKEITLAARQRAARAEGELEALRRQND ETSSLHERAVSDATSRIEELETQLSEREASIRMQRLRHRDERERGRISDT SFASEREMLTTQVQVAEGKLKRLERELLAEKARNDAERKELKEKCDWAYG YAKRLQKEIEHLSSTRSSFGEFRDANTTDLRTKNVALESEVFRMRSQLRD ESVSRTRMGAKLAELEGENDRLRELCRNAQQNEEQSKFMNEEITLLRIQA SEEEQAVRNASALQSEKEELARLISALSPTGDAQEGIQILRSLADGAGGS KSADIAQRIAAQQYEVRIAEIEQEHSIKLLRLQGELDDCHRSMREMKNES IQLQEDKETASAQQKRSERGRRILQREVDHLKAALREIEEDEIGTTSQPE DSRLRRRVEDAEKMSSEYRSALASVEAELEKKRKQIGELRSRSIGEFESM PSRDQRLSRVRELKHQLDSEAGLRREAEKEVDKLNAQLKDIQGKMEELQA EYAMLPPDTSAPDYDPTKVKALHLVDNPLAKALRDYAMTSIEKRHRAREH LDKDVDMCDESNAEVTTLKMRLSQLQQENEQLSKDSKVGLRTKEIAMKKI EEVRGAVYHLFGWSMRLTGAKYTLGSLYAESPNELLEFGRNENGTFALME THYTNQLTEDIEEYVQKMNSIPGFLAQITMENLGKTTMMNV* back to topmRNA from alignment at tig00000092_pilon:346697..348922+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra1353.t1 ID=Ggra1353.t1|Name=Ggra1353.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2226bp|location=Sequence derived from alignment at tig00000092_pilon:346697..348922+ (Gracilaria gracilis GNS1m male) ATGGATGATGACACCGCGGCTTCGCCACCCGACAATGCGTGGCTTCGAGT
GAGCGATACGATACGTTCCCTACAAAGCGATGTACGCGTTCTTCAGGATC
CTGCCGTGCGTTCGGCCTTGCAGACACCCCCAGCTGCGCCACGTACACCT
GCTGAACTCAACGCTAAGATTGTTGCACTGCGAACAGAGCTTAGCCAACG
AGAACAGAAGCTAAAGGAGGAAAAAGAAATAACTCTAGCAGCCCGTCAAC
GCGCTGCTAGAGCAGAGGGGGAGCTTGAGGCATTGCGACGTCAGAATGAC
GAGACTTCATCTCTGCATGAACGTGCCGTTTCTGACGCTACTTCCCGCAT
TGAAGAATTGGAGACTCAGCTTTCGGAAAGAGAAGCTAGTATCAGAATGC
AGAGGCTGCGGCATCGTGACGAACGCGAGCGAGGCCGAATCTCTGATACA
TCTTTTGCATCTGAAAGAGAGATGCTTACTACCCAGGTACAGGTCGCCGA
AGGAAAGCTTAAACGTCTGGAACGCGAATTGCTGGCGGAAAAGGCTCGCA
ATGATGCAGAGAGAAAAGAACTTAAGGAAAAGTGCGATTGGGCGTACGGC
TATGCGAAGAGATTACAGAAAGAAATAGAGCATCTCTCAAGCACCCGGTC
TTCCTTCGGCGAGTTCCGGGATGCAAACACGACAGACCTGCGGACCAAGA
ACGTGGCTCTAGAATCAGAAGTTTTCCGAATGCGGTCTCAACTTCGTGAC
GAGAGCGTCAGTCGTACTCGAATGGGAGCAAAACTCGCCGAACTGGAGGG
TGAGAACGATCGACTTCGAGAGCTTTGCAGGAATGCGCAGCAGAATGAAG
AGCAGTCAAAGTTTATGAACGAGGAAATTACTCTTCTACGTATTCAAGCT
TCCGAAGAGGAGCAAGCTGTCCGGAACGCTTCGGCACTACAGAGTGAGAA
AGAAGAACTTGCTCGTCTAATCTCCGCCCTATCTCCTACCGGTGATGCGC
AAGAAGGTATTCAAATACTACGTTCTCTTGCTGACGGGGCGGGGGGCAGC
AAGAGTGCTGATATCGCTCAGCGTATAGCAGCGCAGCAATATGAGGTTCG
AATTGCAGAAATAGAACAAGAACATAGCATAAAGCTTTTGAGGTTACAGG
GCGAGCTGGATGATTGTCATCGGAGCATGCGTGAAATGAAGAACGAAAGT
ATTCAACTTCAGGAAGATAAAGAAACAGCTTCTGCACAGCAGAAACGCAG
TGAACGCGGTCGACGGATTTTACAACGAGAAGTTGATCATCTCAAAGCGG
CACTGCGTGAAATTGAAGAAGACGAGATTGGGACAACTTCTCAGCCGGAA
GACAGTAGATTGCGGCGAAGGGTTGAAGATGCTGAAAAGATGTCATCAGA
GTACAGGTCGGCGCTGGCAAGCGTTGAGGCAGAATTGGAAAAGAAACGGA
AGCAAATCGGAGAGTTGAGGTCAAGGAGCATAGGAGAATTTGAATCCATG
CCTTCGAGGGACCAGCGGTTATCCAGAGTACGGGAGCTGAAACATCAGTT
GGATTCAGAAGCTGGTCTTAGACGGGAGGCTGAAAAGGAGGTGGACAAGT
TAAATGCTCAACTGAAAGATATTCAGGGGAAAATGGAAGAACTTCAAGCT
GAATATGCAATGCTTCCGCCTGATACGTCAGCTCCTGACTACGATCCCAC
CAAAGTTAAAGCATTACACCTCGTTGATAATCCACTGGCAAAAGCTTTGC
GGGACTATGCGATGACCTCAATCGAGAAAAGGCACAGAGCACGTGAGCAT
TTGGATAAAGATGTGGATATGTGTGATGAAAGTAATGCAGAAGTAACGAC
TTTGAAGATGAGATTGTCTCAGTTACAACAAGAGAATGAGCAACTTTCAA
AAGATTCCAAGGTAGGACTGAGAACCAAAGAGATTGCAATGAAGAAGATC
GAAGAGGTTCGGGGGGCTGTTTATCACTTGTTTGGATGGTCAATGAGATT
GACAGGTGCAAAGTATACGCTTGGATCCCTGTATGCTGAAAGTCCGAATG
AACTACTTGAGTTCGGGAGGAATGAGAATGGGACTTTTGCGCTGATGGAA
ACTCATTATACGAACCAACTCACTGAGGACATTGAAGAATACGTGCAGAA
AATGAACTCAATTCCTGGGTTTCTCGCGCAGATAACCATGGAGAATTTGG
GGAAGACTACTATGATGAATGTGTGA back to topCoding sequence (CDS) from alignment at tig00000092_pilon:346697..348922+ >Ggra1353.t1 ID=Ggra1353.t1|Name=Ggra1353.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2226bp|location=Sequence derived from alignment at tig00000092_pilon:346697..348922+ (Gracilaria gracilis GNS1m male) ATGGATGATGACACCGCGGCTTCGCCACCCGACAATGCGTGGCTTCGAGT GAGCGATACGATACGTTCCCTACAAAGCGATGTACGCGTTCTTCAGGATC CTGCCGTGCGTTCGGCCTTGCAGACACCCCCAGCTGCGCCACGTACACCT GCTGAACTCAACGCTAAGATTGTTGCACTGCGAACAGAGCTTAGCCAACG AGAACAGAAGCTAAAGGAGGAAAAAGAAATAACTCTAGCAGCCCGTCAAC GCGCTGCTAGAGCAGAGGGGGAGCTTGAGGCATTGCGACGTCAGAATGAC GAGACTTCATCTCTGCATGAACGTGCCGTTTCTGACGCTACTTCCCGCAT TGAAGAATTGGAGACTCAGCTTTCGGAAAGAGAAGCTAGTATCAGAATGC AGAGGCTGCGGCATCGTGACGAACGCGAGCGAGGCCGAATCTCTGATACA TCTTTTGCATCTGAAAGAGAGATGCTTACTACCCAGGTACAGGTCGCCGA AGGAAAGCTTAAACGTCTGGAACGCGAATTGCTGGCGGAAAAGGCTCGCA ATGATGCAGAGAGAAAAGAACTTAAGGAAAAGTGCGATTGGGCGTACGGC TATGCGAAGAGATTACAGAAAGAAATAGAGCATCTCTCAAGCACCCGGTC TTCCTTCGGCGAGTTCCGGGATGCAAACACGACAGACCTGCGGACCAAGA ACGTGGCTCTAGAATCAGAAGTTTTCCGAATGCGGTCTCAACTTCGTGAC GAGAGCGTCAGTCGTACTCGAATGGGAGCAAAACTCGCCGAACTGGAGGG TGAGAACGATCGACTTCGAGAGCTTTGCAGGAATGCGCAGCAGAATGAAG AGCAGTCAAAGTTTATGAACGAGGAAATTACTCTTCTACGTATTCAAGCT TCCGAAGAGGAGCAAGCTGTCCGGAACGCTTCGGCACTACAGAGTGAGAA AGAAGAACTTGCTCGTCTAATCTCCGCCCTATCTCCTACCGGTGATGCGC AAGAAGGTATTCAAATACTACGTTCTCTTGCTGACGGGGCGGGGGGCAGC AAGAGTGCTGATATCGCTCAGCGTATAGCAGCGCAGCAATATGAGGTTCG AATTGCAGAAATAGAACAAGAACATAGCATAAAGCTTTTGAGGTTACAGG GCGAGCTGGATGATTGTCATCGGAGCATGCGTGAAATGAAGAACGAAAGT ATTCAACTTCAGGAAGATAAAGAAACAGCTTCTGCACAGCAGAAACGCAG TGAACGCGGTCGACGGATTTTACAACGAGAAGTTGATCATCTCAAAGCGG CACTGCGTGAAATTGAAGAAGACGAGATTGGGACAACTTCTCAGCCGGAA GACAGTAGATTGCGGCGAAGGGTTGAAGATGCTGAAAAGATGTCATCAGA GTACAGGTCGGCGCTGGCAAGCGTTGAGGCAGAATTGGAAAAGAAACGGA AGCAAATCGGAGAGTTGAGGTCAAGGAGCATAGGAGAATTTGAATCCATG CCTTCGAGGGACCAGCGGTTATCCAGAGTACGGGAGCTGAAACATCAGTT GGATTCAGAAGCTGGTCTTAGACGGGAGGCTGAAAAGGAGGTGGACAAGT TAAATGCTCAACTGAAAGATATTCAGGGGAAAATGGAAGAACTTCAAGCT GAATATGCAATGCTTCCGCCTGATACGTCAGCTCCTGACTACGATCCCAC CAAAGTTAAAGCATTACACCTCGTTGATAATCCACTGGCAAAAGCTTTGC GGGACTATGCGATGACCTCAATCGAGAAAAGGCACAGAGCACGTGAGCAT TTGGATAAAGATGTGGATATGTGTGATGAAAGTAATGCAGAAGTAACGAC TTTGAAGATGAGATTGTCTCAGTTACAACAAGAGAATGAGCAACTTTCAA AAGATTCCAAGGTAGGACTGAGAACCAAAGAGATTGCAATGAAGAAGATC GAAGAGGTTCGGGGGGCTGTTTATCACTTGTTTGGATGGTCAATGAGATT GACAGGTGCAAAGTATACGCTTGGATCCCTGTATGCTGAAAGTCCGAATG AACTACTTGAGTTCGGGAGGAATGAGAATGGGACTTTTGCGCTGATGGAA ACTCATTATACGAACCAACTCACTGAGGACATTGAAGAATACGTGCAGAA AATGAACTCAATTCCTGGGTTTCTCGCGCAGATAACCATGGAGAATTTGG GGAAGACTACTATGATGAATGTGTGA back to top
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