Ggra1338.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1338.t1
Unique NameGgra1338.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length132
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000092_piloncontigtig00000092_pilon:231139..231534 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1338Ggra1338Gracilaria gracilis GNS1m malegenetig00000092_pilon 231139..231534 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1338.t1.start1Ggra1338.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000092_pilon 231139..231141 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1338.t1.CDS1Ggra1338.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000092_pilon 231139..231534 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1338.t1.exon1Ggra1338.t1.exon1Gracilaria gracilis GNS1m maleexontig00000092_pilon 231139..231534 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1338.t1.stop1Ggra1338.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000092_pilon 231532..231534 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1338.t1Ggra1338.t1Gracilaria gracilis GNS1m malepolypeptidetig00000092_pilon 231139..231534 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1338.t1 ID=Ggra1338.t1|Name=Ggra1338.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=132bp
MIDVEELEGVMEKKRKMVRDGMNLHPGVISHAWIDTSNGMIVTSDGALKL
MRDQQHQKSAAAAAVTARDAAEEPKDAAGIEAKRAANQSFAVWALNRHRN
IYDDSTELEMPRPMAFRRSVAKQREQAKTEN*
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spliced messenger RNA

>Ggra1338.t1 ID=Ggra1338.t1|Name=Ggra1338.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=396bp|location=Sequence derived from alignment at tig00000092_pilon:231139..231534+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATCGATGTTGAAGAGTTAGAAGGTGTAATGGAGAAAAAGCGCAAGAT
GGTTCGTGATGGTATGAACTTACATCCAGGCGTAATCTCCCATGCTTGGA
TAGACACCAGTAATGGAATGATTGTAACTTCGGATGGAGCTTTAAAGCTA
ATGCGCGATCAGCAACATCAGAAATCTGCTGCTGCAGCAGCGGTTACTGC
TCGTGATGCTGCAGAGGAACCAAAGGACGCCGCGGGCATTGAAGCAAAGC
GGGCGGCTAATCAATCTTTCGCAGTGTGGGCATTGAATCGCCACCGGAAT
ATCTACGACGATTCCACCGAGTTGGAGATGCCTCGGCCTATGGCTTTCCG
GCGCTCTGTTGCAAAGCAGAGAGAGCAGGCGAAGACTGAGAACTAA
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protein sequence of Ggra1338.t1

>Ggra1338.t1 ID=Ggra1338.t1|Name=Ggra1338.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=132bp
MIDVEELEGVMEKKRKMVRDGMNLHPGVISHAWIDTSNGMIVTSDGALKL
MRDQQHQKSAAAAAVTARDAAEEPKDAAGIEAKRAANQSFAVWALNRHRN
IYDDSTELEMPRPMAFRRSVAKQREQAKTEN*
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mRNA from alignment at tig00000092_pilon:231139..231534+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1338.t1 ID=Ggra1338.t1|Name=Ggra1338.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=396bp|location=Sequence derived from alignment at tig00000092_pilon:231139..231534+ (Gracilaria gracilis GNS1m male)
ATGATCGATGTTGAAGAGTTAGAAGGTGTAATGGAGAAAAAGCGCAAGAT
GGTTCGTGATGGTATGAACTTACATCCAGGCGTAATCTCCCATGCTTGGA
TAGACACCAGTAATGGAATGATTGTAACTTCGGATGGAGCTTTAAAGCTA
ATGCGCGATCAGCAACATCAGAAATCTGCTGCTGCAGCAGCGGTTACTGC
TCGTGATGCTGCAGAGGAACCAAAGGACGCCGCGGGCATTGAAGCAAAGC
GGGCGGCTAATCAATCTTTCGCAGTGTGGGCATTGAATCGCCACCGGAAT
ATCTACGACGATTCCACCGAGTTGGAGATGCCTCGGCCTATGGCTTTCCG
GCGCTCTGTTGCAAAGCAGAGAGAGCAGGCGAAGACTGAGAACTAA
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Coding sequence (CDS) from alignment at tig00000092_pilon:231139..231534+

>Ggra1338.t1 ID=Ggra1338.t1|Name=Ggra1338.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=396bp|location=Sequence derived from alignment at tig00000092_pilon:231139..231534+ (Gracilaria gracilis GNS1m male)
ATGATCGATGTTGAAGAGTTAGAAGGTGTAATGGAGAAAAAGCGCAAGAT
GGTTCGTGATGGTATGAACTTACATCCAGGCGTAATCTCCCATGCTTGGA
TAGACACCAGTAATGGAATGATTGTAACTTCGGATGGAGCTTTAAAGCTA
ATGCGCGATCAGCAACATCAGAAATCTGCTGCTGCAGCAGCGGTTACTGC
TCGTGATGCTGCAGAGGAACCAAAGGACGCCGCGGGCATTGAAGCAAAGC
GGGCGGCTAATCAATCTTTCGCAGTGTGGGCATTGAATCGCCACCGGAAT
ATCTACGACGATTCCACCGAGTTGGAGATGCCTCGGCCTATGGCTTTCCG
GCGCTCTGTTGCAAAGCAGAGAGAGCAGGCGAAGACTGAGAACTAA
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