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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 357808.RoseRS_4074 |
| PFAMs | Glyco_transf_4,Glycos_transf_1,Glycos_transf_2 |
| Max annot lvl | 200795|Chloroflexi |
| Evalue | 1.33e-15 |
| EggNOG OGs | COG0438@1|root,COG1215@1|root,COG0438@2|Bacteria,COG1215@2|Bacteria,2G9IT@200795|Chloroflexi |
| Description | glycosyl transferase group 1 |
| COG category | M |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra1322.t1.stop1 | Ggra1322.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000092_pilon 101185..101187 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra1322.t1.intron1 | Ggra1322.t1.intron1 | Gracilaria gracilis GNS1m male | intron | tig00000092_pilon 102788..103054 - |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra1322.t1.start1 | Ggra1322.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000092_pilon 103876..103878 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra1322.t1 ID=Ggra1322.t1|Name=Ggra1322.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=809bp MEKAYLSLLHRSGASAIRMLSYNHHSLLKSYQLGDPLIVRREFPRNSTSE TQAITPSPLFYSIPSYQRAVIHSYHVHSSFSQWAPLVSVLSHSSLLREAL FTRTHKHAVLSLDLFPKSSILLPAHLHSELAFYKWSARHEESEMYRYDVF DMSNSFETPDLSPIPFWPIDNRKQRHVMFLLPWMQMGENEKCILDVAQKA LSLDWHITFVLTMPFWAEDSFGEMSLQHQWLDRALQLTPDTFDLLQLAPH QHSSRLLRHLLASRRPDFVLMANSRGEERAKVRSEMRAKHGISERSTVVL YAGRFIVEKGIDIVADIAKMAANDVDLGSRLTFLFVGSGPELGRLESLPE RGADGSPVVIVKAPAYGLGEMRKYYAMSDIFLLPSVNEGIALVLYEAMGS GMLAMSTDVGGQGELITKETGVLLTNYRSYSKMLNHTMKSLVDVIEHPKR YVDVISAGTRLVRSKFTTERFGECMIRNLEGVMRRKGKQNLMSREHWEDA GVIQKRVDDVSDHVLDGVAVERFHGLYNRERVERSIEGFMTIGIKTYVCD KTIVGQVENLVRSIRVHYPRVRVILANDGPISLGDEEFLKEDPFTEEHVL PADSGISYGRNHMVNATVSRYLLLLDDDYVFGYKTNLMALLHGIHKDGLD LVGMRLTRVADDDVFIFEQVGNITSFKNRELTLCMWDENLGPAKTEDITH PFEVDVLHNAFIASVDVVRKHGWRIDLKVHERIAFFVDAKTANLKVGYLP SVSVYHKTEEHDTCRSKLIEAFDSKTLPYEERIRFDTKCGENFPKWIREH VVQHELAV* back to topspliced messenger RNA >Ggra1322.t1 ID=Ggra1322.t1|Name=Ggra1322.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2427bp|location=Sequence derived from alignment at tig00000092_pilon:101185..103878- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGAGAAGGCATATCTCTCATTGTTACATCGCTCCGGAGCCTCTGCAAT TCGAATGCTATCATACAATCACCACTCACTACTCAAATCATACCAACTGG GAGATCCGCTAATCGTGCGCCGTGAATTTCCGCGCAACTCTACTTCGGAA ACACAAGCTATTACTCCCTCACCGCTGTTCTACAGCATACCGTCGTATCA ACGTGCGGTCATACATTCATACCACGTACACTCTTCATTTTCGCAATGGG CGCCCTTGGTATCTGTTCTCTCACATTCGTCTTTACTGCGCGAAGCTCTT TTCACGCGCACCCACAAACATGCGGTTCTATCACTGGATCTATTCCCCAA GTCGTCCATTTTACTACCGGCGCATCTACACTCGGAACTGGCGTTCTACA AGTGGTCTGCACGACACGAGGAGTCGGAAATGTACCGGTATGATGTGTTT GACATGTCTAATTCGTTTGAGACGCCTGACTTGTCGCCTATACCGTTCTG GCCTATTGACAATCGCAAGCAACGTCACGTAATGTTCCTGCTGCCGTGGA TGCAAATGGGAGAAAACGAGAAATGTATCCTGGATGTTGCTCAGAAAGCG CTTTCGCTGGACTGGCACATCACATTTGTTCTGACAATGCCGTTCTGGGC GGAAGACTCGTTTGGGGAGATGTCGCTGCAACACCAATGGTTGGATCGTG CACTGCAACTAACACCGGACACGTTCGACCTACTACAATTAGCTCCACAT CAACACTCGTCGCGGTTGCTTCGCCATCTACTGGCTTCTCGTCGACCTGA TTTTGTGTTGATGGCGAATTCACGCGGTGAGGAACGGGCGAAGGTTCGGT CGGAGATGCGAGCGAAGCATGGGATATCGGAAAGGTCGACGGTTGTTTTG TATGCGGGGCGATTCATCGTTGAGAAAGGTATCGATATTGTGGCGGACAT TGCGAAAATGGCTGCGAATGATGTGGATCTTGGGTCGAGGTTAACGTTTT TGTTTGTGGGGAGTGGGCCAGAGTTGGGGAGGTTGGAATCTCTTCCAGAG AGGGGGGCGGACGGGAGTCCAGTGGTGATTGTGAAAGCTCCCGCGTATGG GCTTGGGGAAATGAGGAAATACTATGCGATGTCGGATATTTTCCTGTTGC CGTCAGTGAATGAGGGGATTGCACTGGTTTTGTATGAAGCGATGGGGTCT GGGATGCTTGCAATGTCGACGGACGTGGGAGGGCAGGGGGAACTGATCAC GAAGGAGACTGGTGTTCTGCTGACCAACTATCGAAGTTATTCGAAGATGC TGAATCACACTATGAAGAGCCTGGTGGATGTTATTGAGCATCCCAAGAGG TATGTGGATGTGATAAGTGCCGGGACTCGTCTTGTACGAAGCAAGTTCAC AACAGAGAGGTTTGGGGAGTGTATGATCCGGAATCTGGAAGGGGTAATGC GAAGGAAGGGGAAGCAGAACCTAATGTCACGGGAGCACTGGGAAGATGCG GGGGTCATACAGAAGCGGGTAGATGATGTGTCGGATCACGTTTTAGACGG AGTAGCGGTTGAACGATTCCATGGGCTTTACAATCGTGAGCGGGTGGAAC GGTCAATAGAGGGATTCATGACGATTGGGATCAAGACATATGTGTGCGAT AAGACGATAGTGGGTCAAGTGGAAAACCTTGTTCGCTCGATCCGTGTACA TTATCCGAGGGTACGGGTTATCCTGGCCAATGATGGACCGATATCACTAG GGGACGAGGAGTTTTTGAAAGAAGATCCATTCACAGAGGAACACGTCCTA CCGGCGGACAGTGGGATATCGTATGGGCGGAATCATATGGTGAATGCAAC GGTTTCGCGGTATTTACTTCTCTTGGATGATGATTACGTCTTCGGCTACA AGACGAATCTGATGGCGCTTCTTCATGGTATACACAAAGATGGTCTAGAC CTTGTAGGAATGCGTTTGACAAGAGTTGCTGATGATGACGTGTTTATTTT TGAGCAAGTGGGAAACATCACAAGCTTCAAGAATCGGGAACTGACACTCT GTATGTGGGACGAAAACTTGGGCCCTGCCAAAACTGAGGACATCACTCAT CCATTTGAAGTGGATGTGTTGCATAATGCATTCATAGCGAGCGTGGATGT CGTTCGCAAGCATGGTTGGAGAATTGATCTGAAGGTCCACGAACGTATTG CCTTTTTTGTAGACGCAAAGACTGCCAATCTTAAGGTTGGTTATCTCCCG AGCGTATCGGTATATCACAAGACAGAAGAACACGATACATGCCGCTCCAA ACTAATTGAAGCCTTTGATTCCAAAACTCTGCCTTATGAAGAAAGGATCC GCTTTGACACAAAATGTGGGGAAAACTTCCCCAAATGGATTCGGGAACAT GTCGTACAACATGAACTGGCGGTTTAG back to topprotein sequence of Ggra1322.t1 >Ggra1322.t1 ID=Ggra1322.t1|Name=Ggra1322.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=809bp
MEKAYLSLLHRSGASAIRMLSYNHHSLLKSYQLGDPLIVRREFPRNSTSE TQAITPSPLFYSIPSYQRAVIHSYHVHSSFSQWAPLVSVLSHSSLLREAL FTRTHKHAVLSLDLFPKSSILLPAHLHSELAFYKWSARHEESEMYRYDVF DMSNSFETPDLSPIPFWPIDNRKQRHVMFLLPWMQMGENEKCILDVAQKA LSLDWHITFVLTMPFWAEDSFGEMSLQHQWLDRALQLTPDTFDLLQLAPH QHSSRLLRHLLASRRPDFVLMANSRGEERAKVRSEMRAKHGISERSTVVL YAGRFIVEKGIDIVADIAKMAANDVDLGSRLTFLFVGSGPELGRLESLPE RGADGSPVVIVKAPAYGLGEMRKYYAMSDIFLLPSVNEGIALVLYEAMGS GMLAMSTDVGGQGELITKETGVLLTNYRSYSKMLNHTMKSLVDVIEHPKR YVDVISAGTRLVRSKFTTERFGECMIRNLEGVMRRKGKQNLMSREHWEDA GVIQKRVDDVSDHVLDGVAVERFHGLYNRERVERSIEGFMTIGIKTYVCD KTIVGQVENLVRSIRVHYPRVRVILANDGPISLGDEEFLKEDPFTEEHVL PADSGISYGRNHMVNATVSRYLLLLDDDYVFGYKTNLMALLHGIHKDGLD LVGMRLTRVADDDVFIFEQVGNITSFKNRELTLCMWDENLGPAKTEDITH PFEVDVLHNAFIASVDVVRKHGWRIDLKVHERIAFFVDAKTANLKVGYLP SVSVYHKTEEHDTCRSKLIEAFDSKTLPYEERIRFDTKCGENFPKWIREH VVQHELAV* back to topmRNA from alignment at tig00000092_pilon:101185..103878- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra1322.t1 ID=Ggra1322.t1|Name=Ggra1322.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2694bp|location=Sequence derived from alignment at tig00000092_pilon:101185..103878- (Gracilaria gracilis GNS1m male) ATGGAGAAGGCATATCTCTCATTGTTACATCGCTCCGGAGCCTCTGCAAT
TCGAATGCTATCATACAATCACCACTCACTACTCAAATCATACCAACTGG
GAGATCCGCTAATCGTGCGCCGTGAATTTCCGCGCAACTCTACTTCGGAA
ACACAAGCTATTACTCCCTCACCGCTGTTCTACAGCATACCGTCGTATCA
ACGTGCGGTCATACATTCATACCACGTACACTCTTCATTTTCGCAATGGG
CGCCCTTGGTATCTGTTCTCTCACATTCGTCTTTACTGCGCGAAGCTCTT
TTCACGCGCACCCACAAACATGCGGTTCTATCACTGGATCTATTCCCCAA
GTCGTCCATTTTACTACCGGCGCATCTACACTCGGAACTGGCGTTCTACA
AGTGGTCTGCACGACACGAGGAGTCGGAAATGTACCGGTATGATGTGTTT
GACATGTCTAATTCGTTTGAGACGCCTGACTTGTCGCCTATACCGTTCTG
GCCTATTGACAATCGCAAGCAACGTCACGTAATGTTCCTGCTGCCGTGGA
TGCAAATGGGAGAAAACGAGAAATGTATCCTGGATGTTGCTCAGAAAGCG
CTTTCGCTGGACTGGCACATCACATTTGTTCTGACAATGCCGTTCTGGGC
GGAAGACTCGTTTGGGGAGATGTCGCTGCAACACCAATGGTTGGATCGTG
CACTGCAACTAACACCGGACACGTTCGACCTACTACAATTAGCTCCACAT
CAACACTCGTCGCGGTTGCTTCGCCATCTACTGGCTTCTCGTCGACCTGA
TTTTGTGTTGATGGCGAATTCACGGTGGGCGTACTCTCATGCGTCGTTGA
TCAATGCAGTGGTTCCGGATGCGGTGGTGGCGGACTACAACCACATGATT
CACATGAGCTGGGAGGGGGGTGGAATGCCTCGATTTGGGGCGAATCAGAC
GCGGAACTTTGACATACATCTGACGGCTTCTCATGATGTGGAGAATGCGA
TGCGGAAGTGGATTGCACCGGAGGTGCTGAGGAGTAATCGCCAAAAAGTA
CGCACATGTTATATCGGTACGGACCCGGAACTGCTTTACAGCGGTGAGGA
ACGGGCGAAGGTTCGGTCGGAGATGCGAGCGAAGCATGGGATATCGGAAA
GGTCGACGGTTGTTTTGTATGCGGGGCGATTCATCGTTGAGAAAGGTATC
GATATTGTGGCGGACATTGCGAAAATGGCTGCGAATGATGTGGATCTTGG
GTCGAGGTTAACGTTTTTGTTTGTGGGGAGTGGGCCAGAGTTGGGGAGGT
TGGAATCTCTTCCAGAGAGGGGGGCGGACGGGAGTCCAGTGGTGATTGTG
AAAGCTCCCGCGTATGGGCTTGGGGAAATGAGGAAATACTATGCGATGTC
GGATATTTTCCTGTTGCCGTCAGTGAATGAGGGGATTGCACTGGTTTTGT
ATGAAGCGATGGGGTCTGGGATGCTTGCAATGTCGACGGACGTGGGAGGG
CAGGGGGAACTGATCACGAAGGAGACTGGTGTTCTGCTGACCAACTATCG
AAGTTATTCGAAGATGCTGAATCACACTATGAAGAGCCTGGTGGATGTTA
TTGAGCATCCCAAGAGGTATGTGGATGTGATAAGTGCCGGGACTCGTCTT
GTACGAAGCAAGTTCACAACAGAGAGGTTTGGGGAGTGTATGATCCGGAA
TCTGGAAGGGGTAATGCGAAGGAAGGGGAAGCAGAACCTAATGTCACGGG
AGCACTGGGAAGATGCGGGGGTCATACAGAAGCGGGTAGATGATGTGTCG
GATCACGTTTTAGACGGAGTAGCGGTTGAACGATTCCATGGGCTTTACAA
TCGTGAGCGGGTGGAACGGTCAATAGAGGGATTCATGACGATTGGGATCA
AGACATATGTGTGCGATAAGACGATAGTGGGTCAAGTGGAAAACCTTGTT
CGCTCGATCCGTGTACATTATCCGAGGGTACGGGTTATCCTGGCCAATGA
TGGACCGATATCACTAGGGGACGAGGAGTTTTTGAAAGAAGATCCATTCA
CAGAGGAACACGTCCTACCGGCGGACAGTGGGATATCGTATGGGCGGAAT
CATATGGTGAATGCAACGGTTTCGCGGTATTTACTTCTCTTGGATGATGA
TTACGTCTTCGGCTACAAGACGAATCTGATGGCGCTTCTTCATGGTATAC
ACAAAGATGGTCTAGACCTTGTAGGAATGCGTTTGACAAGAGTTGCTGAT
GATGACGTGTTTATTTTTGAGCAAGTGGGAAACATCACAAGCTTCAAGAA
TCGGGAACTGACACTCTGTATGTGGGACGAAAACTTGGGCCCTGCCAAAA
CTGAGGACATCACTCATCCATTTGAAGTGGATGTGTTGCATAATGCATTC
ATAGCGAGCGTGGATGTCGTTCGCAAGCATGGTTGGAGAATTGATCTGAA
GGTCCACGAACGTATTGCCTTTTTTGTAGACGCAAAGACTGCCAATCTTA
AGGTTGGTTATCTCCCGAGCGTATCGGTATATCACAAGACAGAAGAACAC
GATACATGCCGCTCCAAACTAATTGAAGCCTTTGATTCCAAAACTCTGCC
TTATGAAGAAAGGATCCGCTTTGACACAAAATGTGGGGAAAACTTCCCCA
AATGGATTCGGGAACATGTCGTACAACATGAACTGGCGGTTTAG back to topCoding sequence (CDS) from alignment at tig00000092_pilon:101185..103878- >Ggra1322.t1 ID=Ggra1322.t1|Name=Ggra1322.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2427bp|location=Sequence derived from alignment at tig00000092_pilon:101185..103878- (Gracilaria gracilis GNS1m male) ATGGAGAAGGCATATCTCTCATTGTTACATCGCTCCGGAGCCTCTGCAAT TCGAATGCTATCATACAATCACCACTCACTACTCAAATCATACCAACTGG GAGATCCGCTAATCGTGCGCCGTGAATTTCCGCGCAACTCTACTTCGGAA ACACAAGCTATTACTCCCTCACCGCTGTTCTACAGCATACCGTCGTATCA ACGTGCGGTCATACATTCATACCACGTACACTCTTCATTTTCGCAATGGG CGCCCTTGGTATCTGTTCTCTCACATTCGTCTTTACTGCGCGAAGCTCTT TTCACGCGCACCCACAAACATGCGGTTCTATCACTGGATCTATTCCCCAA GTCGTCCATTTTACTACCGGCGCATCTACACTCGGAACTGGCGTTCTACA AGTGGTCTGCACGACACGAGGAGTCGGAAATGTACCGGTATGATGTGTTT GACATGTCTAATTCGTTTGAGACGCCTGACTTGTCGCCTATACCGTTCTG GCCTATTGACAATCGCAAGCAACGTCACGTAATGTTCCTGCTGCCGTGGA TGCAAATGGGAGAAAACGAGAAATGTATCCTGGATGTTGCTCAGAAAGCG CTTTCGCTGGACTGGCACATCACATTTGTTCTGACAATGCCGTTCTGGGC GGAAGACTCGTTTGGGGAGATGTCGCTGCAACACCAATGGTTGGATCGTG CACTGCAACTAACACCGGACACGTTCGACCTACTACAATTAGCTCCACAT CAACACTCGTCGCGGTTGCTTCGCCATCTACTGGCTTCTCGTCGACCTGA TTTTGTGTTGATGGCGAATTCACGCGGTGAGGAACGGGCGAAGGTTCGGT CGGAGATGCGAGCGAAGCATGGGATATCGGAAAGGTCGACGGTTGTTTTG TATGCGGGGCGATTCATCGTTGAGAAAGGTATCGATATTGTGGCGGACAT TGCGAAAATGGCTGCGAATGATGTGGATCTTGGGTCGAGGTTAACGTTTT TGTTTGTGGGGAGTGGGCCAGAGTTGGGGAGGTTGGAATCTCTTCCAGAG AGGGGGGCGGACGGGAGTCCAGTGGTGATTGTGAAAGCTCCCGCGTATGG GCTTGGGGAAATGAGGAAATACTATGCGATGTCGGATATTTTCCTGTTGC CGTCAGTGAATGAGGGGATTGCACTGGTTTTGTATGAAGCGATGGGGTCT GGGATGCTTGCAATGTCGACGGACGTGGGAGGGCAGGGGGAACTGATCAC GAAGGAGACTGGTGTTCTGCTGACCAACTATCGAAGTTATTCGAAGATGC TGAATCACACTATGAAGAGCCTGGTGGATGTTATTGAGCATCCCAAGAGG TATGTGGATGTGATAAGTGCCGGGACTCGTCTTGTACGAAGCAAGTTCAC AACAGAGAGGTTTGGGGAGTGTATGATCCGGAATCTGGAAGGGGTAATGC GAAGGAAGGGGAAGCAGAACCTAATGTCACGGGAGCACTGGGAAGATGCG GGGGTCATACAGAAGCGGGTAGATGATGTGTCGGATCACGTTTTAGACGG AGTAGCGGTTGAACGATTCCATGGGCTTTACAATCGTGAGCGGGTGGAAC GGTCAATAGAGGGATTCATGACGATTGGGATCAAGACATATGTGTGCGAT AAGACGATAGTGGGTCAAGTGGAAAACCTTGTTCGCTCGATCCGTGTACA TTATCCGAGGGTACGGGTTATCCTGGCCAATGATGGACCGATATCACTAG GGGACGAGGAGTTTTTGAAAGAAGATCCATTCACAGAGGAACACGTCCTA CCGGCGGACAGTGGGATATCGTATGGGCGGAATCATATGGTGAATGCAAC GGTTTCGCGGTATTTACTTCTCTTGGATGATGATTACGTCTTCGGCTACA AGACGAATCTGATGGCGCTTCTTCATGGTATACACAAAGATGGTCTAGAC CTTGTAGGAATGCGTTTGACAAGAGTTGCTGATGATGACGTGTTTATTTT TGAGCAAGTGGGAAACATCACAAGCTTCAAGAATCGGGAACTGACACTCT GTATGTGGGACGAAAACTTGGGCCCTGCCAAAACTGAGGACATCACTCAT CCATTTGAAGTGGATGTGTTGCATAATGCATTCATAGCGAGCGTGGATGT CGTTCGCAAGCATGGTTGGAGAATTGATCTGAAGGTCCACGAACGTATTG CCTTTTTTGTAGACGCAAAGACTGCCAATCTTAAGGTTGGTTATCTCCCG AGCGTATCGGTATATCACAAGACAGAAGAACACGATACATGCCGCTCCAA ACTAATTGAAGCCTTTGATTCCAAAACTCTGCCTTATGAAGAAAGGATCC GCTTTGACACAAAATGTGGGGAAAACTTCCCCAAATGGATTCGGGAACAT GTCGTACAACATGAACTGGCGGTTTAG back to top
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