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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 314271.RB2654_08177 |
| PFAMs | Glyco_transf_7C |
| Max annot lvl | 28211|Alphaproteobacteria |
| Evalue | 1.66e-08 |
| EggNOG OGs | COG1216@1|root,COG1216@2|Bacteria,1MZBS@1224|Proteobacteria,2UEUD@28211|Alphaproteobacteria |
| Description | N-terminal domain of galactosyltransferase |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra1207.t1.stop1 | Ggra1207.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000168_pilon 310611..310613 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra1207.t1.start1 | Ggra1207.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000168_pilon 316078..316080 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra1207.t1 ID=Ggra1207.t1|Name=Ggra1207.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=485bp MMDHNECSTEGEDLLPKKPSQRHKRTAPSSSPPALQKRRRIEPFWEEEEN AGALEKRWRENIRALEARDPVFFRSYKSRLLDRGIHVEGECIYQGLNATM ENCADLKRVYDVYYRPRRIRGLEVVELGHTVTTLSQFLRYAIASRFCHKA EGWREGRLFQCVAERRLVLHFTDYFRERGSPGTLRIKATTLSRVCDVGLL TVHDENLRAKLQEEVEGSADVRDVLNGVYGIPQIFIDSMSDASQRKLLRE LDRSKSKRAFFIHAQYGLGNRLRALGCAIAISKETGRVLVLIWEPDVHLN CRFSDLFANDMVILEKLNMNWPPGDSNTKDHAMRTVDFYNFMRFNGKHID NPLTELVNPRMRRHVYVKTAYVVRSSFTPRIISTTSMYWKTMRDTLVPNA EIMYLVNDPSFISIKGMVGVHIRSRTIENDIKSVSQELYGNGSRVTDHWR RIIGLKTLQNKIMRLSLRYKFFVAADNRDAIREL* back to topspliced messenger RNA >Ggra1207.t1 ID=Ggra1207.t1|Name=Ggra1207.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1455bp|location=Sequence derived from alignment at tig00000168_pilon:310611..316080- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGATGGACCACAATGAGTGTTCAACAGAAGGCGAGGACCTACTCCCGAA GAAGCCATCTCAGCGACACAAACGAACAGCACCTTCCTCCTCCCCCCCTG CACTACAGAAACGAAGACGAATCGAACCGTTTTGGGAGGAGGAAGAGAAC GCAGGGGCTTTGGAGAAGCGGTGGCGCGAAAATATTCGCGCTCTAGAAGC GCGAGACCCGGTTTTCTTCCGCAGCTACAAATCTCGTCTTCTGGACCGGG GAATACATGTGGAAGGTGAATGCATCTATCAAGGGCTTAATGCCACAATG GAAAACTGCGCTGATCTGAAAAGGGTTTACGATGTGTATTATCGACCAAG ACGCATTCGGGGCCTGGAAGTGGTAGAACTAGGACACACTGTGACCACAT TGTCGCAGTTTCTGCGATATGCTATTGCGTCTAGGTTTTGCCACAAGGCA GAGGGCTGGAGGGAAGGCCGGTTGTTCCAGTGTGTTGCAGAGCGGAGGCT AGTGCTTCATTTCACGGACTATTTCCGAGAAAGAGGCTCTCCGGGTACCC TGAGGATTAAGGCTACAACCCTTTCGAGGGTATGTGATGTTGGTCTCCTC ACCGTTCATGATGAGAACTTGAGGGCAAAGCTTCAGGAAGAGGTCGAAGG AAGTGCAGATGTTCGCGATGTTCTCAATGGAGTCTACGGCATTCCTCAAA TTTTCATCGATAGCATGTCAGATGCCTCTCAAAGAAAGCTGTTACGCGAG TTGGACCGGTCCAAGTCTAAGCGCGCATTTTTCATACATGCTCAGTATGG GCTGGGTAATCGCCTGAGAGCTTTGGGATGCGCAATTGCCATCTCAAAAG AGACTGGCCGTGTCTTGGTTTTGATATGGGAACCTGATGTTCACCTCAAC TGTCGCTTCTCAGATCTATTTGCGAATGATATGGTTATCCTGGAAAAGTT GAACATGAATTGGCCTCCAGGTGATTCCAATACGAAAGACCACGCCATGC GAACAGTAGACTTCTACAATTTTATGCGCTTTAATGGCAAGCATATTGAC AATCCACTCACAGAACTGGTGAATCCAAGAATGAGACGTCATGTGTATGT GAAGACGGCTTATGTTGTGCGCTCCAGCTTCACTCCTCGAATCATCTCTA CAACCTCCATGTATTGGAAGACGATGCGTGATACGCTTGTACCAAATGCA GAGATTATGTATCTCGTGAATGACCCATCATTCATAAGTATCAAGGGCAT GGTTGGCGTGCATATCAGGTCAAGAACTATCGAAAATGATATCAAAAGTG TTAGTCAGGAGTTGTATGGAAACGGTTCTAGAGTTACCGATCACTGGCGT CGAATAATAGGGTTGAAAACGTTGCAGAACAAGATCATGCGCTTAAGCCT GCGGTACAAGTTCTTCGTCGCGGCAGATAACAGGGATGCGATACGGGAGC TTTAA back to topprotein sequence of Ggra1207.t1 >Ggra1207.t1 ID=Ggra1207.t1|Name=Ggra1207.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=485bp
MMDHNECSTEGEDLLPKKPSQRHKRTAPSSSPPALQKRRRIEPFWEEEEN AGALEKRWRENIRALEARDPVFFRSYKSRLLDRGIHVEGECIYQGLNATM ENCADLKRVYDVYYRPRRIRGLEVVELGHTVTTLSQFLRYAIASRFCHKA EGWREGRLFQCVAERRLVLHFTDYFRERGSPGTLRIKATTLSRVCDVGLL TVHDENLRAKLQEEVEGSADVRDVLNGVYGIPQIFIDSMSDASQRKLLRE LDRSKSKRAFFIHAQYGLGNRLRALGCAIAISKETGRVLVLIWEPDVHLN CRFSDLFANDMVILEKLNMNWPPGDSNTKDHAMRTVDFYNFMRFNGKHID NPLTELVNPRMRRHVYVKTAYVVRSSFTPRIISTTSMYWKTMRDTLVPNA EIMYLVNDPSFISIKGMVGVHIRSRTIENDIKSVSQELYGNGSRVTDHWR RIIGLKTLQNKIMRLSLRYKFFVAADNRDAIREL* back to topmRNA from alignment at tig00000168_pilon:310611..316080- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra1207.t1 ID=Ggra1207.t1|Name=Ggra1207.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=5470bp|location=Sequence derived from alignment at tig00000168_pilon:310611..316080- (Gracilaria gracilis GNS1m male) ATGATGGACCACAATGAGTGTTCAACAGAAGGCGAGGACCTACTCCCGAA
GAAGCCATCTCAGCGACACAAACGAACAGCACCTTCCTCCTCCCCCCCTG
CACTACAGAAACGAAGACGAATCGAACCGTTTTGGGAGGAGGAAGAGAAC
GCAGGGGCTTTGGAGAAGCGGTGGCGCGAAAATATTCGCGCTCTAGAAGC
GCGAGACCCGGTTTTCTTCCGCAGCTACAAATCTCGTCTTCTGGACCGGG
GAATACATGTGGAAGGTGAATGCATCTATCAAGGGCTTAATGCCACAATG
GAAAACTGCGCTGATCTGAAAAGGGTTTACGATGTGTATTATCGACCAAG
ACGCATTCGGGGCCTGGAAGTGGTAGAACTAGGACACACTGTGACCACAT
TGTCGCAGTTTCTGCGATATGCTATTGCGTCTAGGTTTTGCCACAAGGCA
GAGGGCTGGAGGGAAGGCCGGTTGTTCCAGTGTGTTGCAGAGCGGAGGCT
AGTGCTTCATTTCACGGACTATTTCCGAGAAAGAGGCTCTCCGGGTACCC
TGAGGATTAAGGCTACAACCCTTTCGAGGGTATGTGATGTTGGTCTCCTC
ACCGTTCATGATGAGAACTTGAGGGCAAAGCTTCAGGTAAGCTTGATAAC
CTTGCGCGGCATTGCGAGCGCGGCAAGGAAGTCCCACCGAATTCGCTCTC
AACGGAAAAAACTTGGGAATACCGAACTGCTCCGCCGTGAAGATATTATC
CTTTTAATTCAGAAAGCAGAGAGGGCCCTAGCGTTCATGATTGATAGTCA
AGGCCTTGAAACTGCCAAGTCCCGAGCGGAACGGATATCGTTTCTGAAGA
AGTGGTGCAAAAGTTTTGCAGGTCTACTCATGCTCACATCTGGCGGACAG
AGACCTCAGGTCTTTGCTCAAGTTGAAGTACCGAGCAGGGAAGAGCTACA
AGAGTGGAGCAAAGATCATGGGAGCTTTATTGAGCTTAGAACTCAGCGAG
AGAAGCGCGCACGGTACGAGGATCTGCCCCAGCTCGTTCTTCCTCCCAAT
GTGATCCGATATATTACGTTTCACGTCGACATTGTCAGGCCAATGATTCA
GGCTACGCATCGCGAATCAGTTAAGGGCCGACCTCTACTGCTCAACCCGA
GTACAGGAAAAAAGCTCACTTCAGAGTCTGTAACAAGAATCTTACGGGCG
TTTCTGAAACTCTGGGATGAACGCCTAGGTCAATTGACCTCTATGGATTT
GCGGCATAGCTACGCCTCCATGATGATGAAGCTTTATCGTGAGAAGCAAG
TGTTTTCGGGTCATACGGAATCCGAGTTCCTTAGTAAACTATGCAAGCAA
ATGAACACCTCACCCGAGCAGCTCCGTCGGACGTATATTGCCCACGACCA
ATCGCAGTACGATGATAACAGAAAAGTGATGGAGTTTTGGTCTTTGGTTC
TGGGAATAAAGGACGAAGAGAGTTATAGGGGTTCCTGAGATGGTGTGCCT
GCTGCGCTCCATGATCTCGATCATTTCGCTCTGAGATGTCCAACACGGAC
ATTTTCGAGACGTTTGTGTCTTCGATCCCTACGCGAGCGCCAACGACTGC
TCGTTTCTGAGATAGTAAAGAAATGGCTTGATCGTTTGTTGACCGCCTCA
GCGAGAGAGCGTATCTGACAGGTGTCAATAGATGAAACGATTTCATCAGC
ACAGTTCACCTGCATTCGGTTCCTGTTGCGCCGCTTACCGTCATCAGCAA
CTTCCTTTCGCTGGCATCGCAACTTGCGCATGTTTGCAAGACAATTTGGG
CGGCGCTGGAACACAGTCTTTGTACCTGACATCACTCAGGAATCATCGGC
GTCGTCCCCAAGGAACCTCATTTAGCGGGGGCGTCCTCTTGAAGCGCGGT
AATAGGAGTGGATTCCTCGTTCCTGTGCTTGGCGCTGACTGTTAGACCTC
TTCCTCTACGTCGGTGACATTACCCACAGGGCCGCTAGCTTGAGGCAAGG
ACCGTTCGCGTGCTTCGGTGGCTCGCTTTCGACGCCGGCGGGTGCTATCA
CGCTCCACAGTTACAAACGGCGGATCCCACGTTTCGTCGCTTTCCCACTG
CATATACATCAGCGTGTACACAAAAGAGCGCAAAAGTGTGCCAGAGTCCT
TCCTTGTCATTGAGGAGCGCGAGAGAATACTTGATGCAACCGGAGCAAGG
ATAGTTGGAATCCTATCTGCGGCTCAGTATGACCAAGTTTGGGTCGCTTC
TTAGGGTTATGCATAGGAATGTCATTCATGTCTTCTTCGTCCACGTCTTC
GTTTATGCTGAGGCCGTGGCAATCGCCCCCGCACTTGTCAGGATCATGGT
CGATCTCGTCGTCCTCCCCCTCCTCATCCATGTCGATAGCGCGGCGCCGG
TTTTCGCACCCGGCTTAAGGCTTTCGTTCTTGACCGGAACAACGATCTTT
TTGGCAGACAAAGCTGGCGCATAAAAGCCAAGTTCAGGGTCTTGGCGCAT
GGATTCAGTTGCACCATAGCCGTGCTTGTGCGAGCCGATGATAAAGTCAG
CATAATCACTAGAGGCTCAGTACAGGGCTGGCGGTGGGATGAACAGGCGC
AACTCGCCAGCGCGCAACGCTCTAATGAGGAGTGGTTATGGACATCCAGC
AATCGACTCAACAGTCTGAGCTTCCTCGCCCGACATGTTCCACGCTGAAG
CGAGCATGAAGATAACACCTGCCAATAGAGGTTCTAGCGGCGGAAACCTT
GGTCCGGTTGGCGTTCCTCCAGACGACTGCTAGCTTCGGAAGCGGCGCGC
TCGACAGCTGCTCAAGCCCAAGCAGCGTCGGCGAAGCAGTCAGCTACCCA
CCAGCGCGCTCACGAATCGCTCATCATGAGAGAAAACGGCAACAACGCGC
TATCTGCCTTCAACGCAGCAGCGCGGGTCGGCGGCGGCCACGAGGACCAC
TGCAGCAGTGGAGGGATGCCGGCCGGCCGCATGCGCGACGGCTCGGTGGC
GGACGGGCGGCCTGGCAGGCTGGTTGCGCGGCCGGGCGCCAACGATGACG
TGACGGGCGCCGGCGCAAAGGCGGCGGCAGCGCGAAAGGGATGGGAAGCG
GCGACAGCGGCGGAGCCGGACACTAGCAATAACGTGACAGGCGGCGGCGC
GGGCGGGATGGAGCGCGACGGCGGCGGCACGGGCGGGGATAGTACGCGGC
GGCGGCGGCGACAATGGCGGCGACGACGACGGCGCCGACACAACAGCCGA
AGAAAGCGCGCAAATGTAAGCAAGTGGATCGAGGTCGATTGTGACTCAAA
AAGTTGGGATCCCCGAGCCTTGACAGAATTGCGCTGTGGCAACAACAATT
CACACACGCTGAATCGCCACCCGCCGAAGGTTAACGAGGGCTAACCTTCT
AACGCTACCTGTCACATGATGGTGTGCCACTTCGCGCTCCCCATTTCTTG
TACTCTCGCTGCCGCAACGCCCTACCAACGGTAGCGTTACCCCTGGTATA
TATACCAAAGGTACCAACAGTACCTCTCCCGCCGCTTCCTCGCCTCCGCG
CTGTCGACCGCCTCGTTCCATGTGACTCACTTCTACCCGCCTCATTCCTC
ATCGCTTTCATTCCCCCCTTTCTACGCGCACGCAATTTTGCCTTTAACAT
AATGCTGGTGGTACTCCAAACGTCTGTGCATAACTCCCCGTCCGACCGCA
TGTCAGTCACCTCCGCGTCTGGTGATTCCCGCGAAGGCAGTCTACCCTTC
TTTGGTCCTGCTTTAAGTCGAAAGCTATCATCGAAGAAGCGCTCCATCCC
CCGCCTATCGCGTCGGTTGTGACGACTTCCGACTAATGTTCTCTTCCTGC
TTGACAGACTGTCTCCAAGTCGAAAGAGCTGGCTCAATTCCCCCCTCGCC
GTTGTATCTCTCGGCATTCTCATATCCCTTTCGCTAACTGTTCTAACCTC
GCTGCTCACTGCGTTCCGTATCCCATCTGACTATCACTTGTCTGCCCCAC
AACTTTCCTCCAACGATGTTTCCTGAATCGTTGCACGACTCCCAGAAAAC
GCACAACACGGTTTTGTTACTAATGCTCTTGCCAATAACTTCAACATTCC
ACCAAGCCTCACTAAAAAGCTAAAGCCATCTCAGCGCTTCGAGCTTCTTA
CCAACCTCCAGAACGTCCACAGTTCGAAGAACCGTGCCCCCAAAACGTCT
CGTTTTCCTCCATGTCGTTGGAACTGTTGCTGCCAACCGCCTCAATACGC
TTACTACGGCCATTTCGTACGCAATGAACACCAATCGTTATCTCCTTGTA
CTGTGGGACATCAAGCGTGGGGGCGAGCAATTGGGCGTCGAACCGCTTGT
TCCATTGTCGACACTCGACCAACATAACACAATGCTTGTGTATGTCAGTT
CGCTGCGGCTCACACCCAACTCTTCAGACTGGAGCGAATTCTAGATCAAC
TACTATACAAGCTTCGGGTCTGGGGGCTATCCCCTTGACAACGTAGCTGC
ATTGGCTAATCTCTATATCTTTCACTGCGCCCAGGAAGAGGTCGAAGGAA
GGTACGCCGCCGCATCACAAGGAGTAGTGCTCATGGAAAAACTATTCCAA
CCGAGTCAGCAGTTCCAATCTCTCTGGAACGACTTATTTAAGGAATAGAC
TTTTCCGGGTTTGACTAGTGCAGATGTTCGCGATGTTCTCAATGGAGTCT
ACGGCATTCCTCAAATTTTCATCGATAGCATGTCAGATGCCTCTCAAAGA
AAGCTGTTACGCGAGTTGGACCGGTCCAAGTCTAAGCGCGCATTTTTCAT
ACATGCTCAGTATGGGCTGGGTAATCGCCTGAGAGCTTTGGGATGCGCAA
TTGCCATCTCAAAAGAGACTGGCCGTGTCTTGGTTTTGATATGGGAACCT
GATGTTCACCTCAACTGTCGCTTCTCAGATCTATTTGCGAATGATATGGT
TATCCTGGAAAAGTTGAACATGAATTGGCCTCCAGGTGATTCCAATACGA
AAGACCACGCCATGCGAACAGTAGACTTCTACAATTTTATGCGCTTTAAT
GGCAAGCATATTGACAATCCACTCACAGAACTGGTGAATCCAAGAATGAG
ACGTCATGTGTATGTGAAGACGGCTTATGTTGTGCGCTCCAGCTTCACTC
CTCGAATCATCTCTACAACCTCCATGTATTGGAAGACGATGCGTGATACG
CTTGTACCAAATGCAGAGATTATGTATCTCGTGAATGACCCATCATTCAT
AAGTATCAAGGGCATGGTTGGCGTGCATATCAGGTCAAGAACTATCGAAA
ATGATATCAAAAGTGTTAGTCAGGAGTTGTATGGAAACGGTTCTAGAGTT
ACCGATCACTGGCGTCGAATAATAGGGTTGAAAACGTTGCAGAACAAGAT
CATGCGCTTAAGCCTGCGGTACAAGTTCTTCGTCGCGGCAGATAACAGGG
ATGCGATACGGGAGCTTTAA back to topCoding sequence (CDS) from alignment at tig00000168_pilon:310611..316080- >Ggra1207.t1 ID=Ggra1207.t1|Name=Ggra1207.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1455bp|location=Sequence derived from alignment at tig00000168_pilon:310611..316080- (Gracilaria gracilis GNS1m male) ATGATGGACCACAATGAGTGTTCAACAGAAGGCGAGGACCTACTCCCGAA GAAGCCATCTCAGCGACACAAACGAACAGCACCTTCCTCCTCCCCCCCTG CACTACAGAAACGAAGACGAATCGAACCGTTTTGGGAGGAGGAAGAGAAC GCAGGGGCTTTGGAGAAGCGGTGGCGCGAAAATATTCGCGCTCTAGAAGC GCGAGACCCGGTTTTCTTCCGCAGCTACAAATCTCGTCTTCTGGACCGGG GAATACATGTGGAAGGTGAATGCATCTATCAAGGGCTTAATGCCACAATG GAAAACTGCGCTGATCTGAAAAGGGTTTACGATGTGTATTATCGACCAAG ACGCATTCGGGGCCTGGAAGTGGTAGAACTAGGACACACTGTGACCACAT TGTCGCAGTTTCTGCGATATGCTATTGCGTCTAGGTTTTGCCACAAGGCA GAGGGCTGGAGGGAAGGCCGGTTGTTCCAGTGTGTTGCAGAGCGGAGGCT AGTGCTTCATTTCACGGACTATTTCCGAGAAAGAGGCTCTCCGGGTACCC TGAGGATTAAGGCTACAACCCTTTCGAGGGTATGTGATGTTGGTCTCCTC ACCGTTCATGATGAGAACTTGAGGGCAAAGCTTCAGGAAGAGGTCGAAGG AAGTGCAGATGTTCGCGATGTTCTCAATGGAGTCTACGGCATTCCTCAAA TTTTCATCGATAGCATGTCAGATGCCTCTCAAAGAAAGCTGTTACGCGAG TTGGACCGGTCCAAGTCTAAGCGCGCATTTTTCATACATGCTCAGTATGG GCTGGGTAATCGCCTGAGAGCTTTGGGATGCGCAATTGCCATCTCAAAAG AGACTGGCCGTGTCTTGGTTTTGATATGGGAACCTGATGTTCACCTCAAC TGTCGCTTCTCAGATCTATTTGCGAATGATATGGTTATCCTGGAAAAGTT GAACATGAATTGGCCTCCAGGTGATTCCAATACGAAAGACCACGCCATGC GAACAGTAGACTTCTACAATTTTATGCGCTTTAATGGCAAGCATATTGAC AATCCACTCACAGAACTGGTGAATCCAAGAATGAGACGTCATGTGTATGT GAAGACGGCTTATGTTGTGCGCTCCAGCTTCACTCCTCGAATCATCTCTA CAACCTCCATGTATTGGAAGACGATGCGTGATACGCTTGTACCAAATGCA GAGATTATGTATCTCGTGAATGACCCATCATTCATAAGTATCAAGGGCAT GGTTGGCGTGCATATCAGGTCAAGAACTATCGAAAATGATATCAAAAGTG TTAGTCAGGAGTTGTATGGAAACGGTTCTAGAGTTACCGATCACTGGCGT CGAATAATAGGGTTGAAAACGTTGCAGAACAAGATCATGCGCTTAAGCCT GCGGTACAAGTTCTTCGTCGCGGCAGATAACAGGGATGCGATACGGGAGC TTTAA back to top
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