Ggra1205.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1205.t1
Unique NameGgra1205.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length125
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:305625..305999 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1205Ggra1205Gracilaria gracilis GNS1m malegenetig00000168_pilon 305625..305999 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1205.t1.stop1Ggra1205.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000168_pilon 305625..305627 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1205.t1.CDS1Ggra1205.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000168_pilon 305625..305999 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1205.t1.exon1Ggra1205.t1.exon1Gracilaria gracilis GNS1m maleexontig00000168_pilon 305625..305999 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1205.t1.start1Ggra1205.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000168_pilon 305997..305999 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1205.t1Ggra1205.t1Gracilaria gracilis GNS1m malepolypeptidetig00000168_pilon 305625..305999 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1205.t1 ID=Ggra1205.t1|Name=Ggra1205.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=125bp
MEKPMVYFGDSMSWKFPEHVMDLFKRVFEYSILGGKSVALQSPKNIMLDV
KILHRRMDGFRCGCYTISFAAEYSSDRGSAPKHSFARGYQLTSSEFYKWM
EIRSRIVHVLLAADFYNREDICEV*
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spliced messenger RNA

>Ggra1205.t1 ID=Ggra1205.t1|Name=Ggra1205.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=375bp|location=Sequence derived from alignment at tig00000168_pilon:305625..305999- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAAAAGCCGATGGTGTACTTTGGTGACAGCATGAGCTGGAAATTTCC
AGAACACGTTATGGATCTGTTCAAGAGAGTTTTTGAATACAGCATATTGG
GAGGTAAATCTGTCGCTCTGCAGTCTCCAAAAAATATTATGCTGGATGTG
AAGATTCTTCATCGACGGATGGATGGTTTCCGTTGCGGTTGCTACACAAT
TTCGTTCGCAGCGGAATACTCATCTGATCGTGGCTCTGCTCCGAAGCATT
CGTTCGCAAGGGGGTATCAGCTGACGTCATCTGAGTTTTATAAATGGATG
GAGATTCGAAGTCGCATTGTGCATGTCCTCTTGGCCGCCGACTTTTACAA
TAGAGAAGACATTTGTGAAGTTTAA
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protein sequence of Ggra1205.t1

>Ggra1205.t1 ID=Ggra1205.t1|Name=Ggra1205.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=125bp
MEKPMVYFGDSMSWKFPEHVMDLFKRVFEYSILGGKSVALQSPKNIMLDV
KILHRRMDGFRCGCYTISFAAEYSSDRGSAPKHSFARGYQLTSSEFYKWM
EIRSRIVHVLLAADFYNREDICEV*
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mRNA from alignment at tig00000168_pilon:305625..305999-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1205.t1 ID=Ggra1205.t1|Name=Ggra1205.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=375bp|location=Sequence derived from alignment at tig00000168_pilon:305625..305999- (Gracilaria gracilis GNS1m male)
ATGGAAAAGCCGATGGTGTACTTTGGTGACAGCATGAGCTGGAAATTTCC
AGAACACGTTATGGATCTGTTCAAGAGAGTTTTTGAATACAGCATATTGG
GAGGTAAATCTGTCGCTCTGCAGTCTCCAAAAAATATTATGCTGGATGTG
AAGATTCTTCATCGACGGATGGATGGTTTCCGTTGCGGTTGCTACACAAT
TTCGTTCGCAGCGGAATACTCATCTGATCGTGGCTCTGCTCCGAAGCATT
CGTTCGCAAGGGGGTATCAGCTGACGTCATCTGAGTTTTATAAATGGATG
GAGATTCGAAGTCGCATTGTGCATGTCCTCTTGGCCGCCGACTTTTACAA
TAGAGAAGACATTTGTGAAGTTTAA
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Coding sequence (CDS) from alignment at tig00000168_pilon:305625..305999-

>Ggra1205.t1 ID=Ggra1205.t1|Name=Ggra1205.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=375bp|location=Sequence derived from alignment at tig00000168_pilon:305625..305999- (Gracilaria gracilis GNS1m male)
ATGGAAAAGCCGATGGTGTACTTTGGTGACAGCATGAGCTGGAAATTTCC
AGAACACGTTATGGATCTGTTCAAGAGAGTTTTTGAATACAGCATATTGG
GAGGTAAATCTGTCGCTCTGCAGTCTCCAAAAAATATTATGCTGGATGTG
AAGATTCTTCATCGACGGATGGATGGTTTCCGTTGCGGTTGCTACACAAT
TTCGTTCGCAGCGGAATACTCATCTGATCGTGGCTCTGCTCCGAAGCATT
CGTTCGCAAGGGGGTATCAGCTGACGTCATCTGAGTTTTATAAATGGATG
GAGATTCGAAGTCGCATTGTGCATGTCCTCTTGGCCGCCGACTTTTACAA
TAGAGAAGACATTTGTGAAGTTTAA
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