Ggra1192.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1192.t1
Unique NameGgra1192.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length232
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:9615..10310 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1192Ggra1192Gracilaria gracilis GNS1m malegenetig00000168_pilon 9615..10310 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1192.t1.start1Ggra1192.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000168_pilon 9615..9617 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1192.t1.CDS1Ggra1192.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000168_pilon 9615..10310 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1192.t1.exon1Ggra1192.t1.exon1Gracilaria gracilis GNS1m maleexontig00000168_pilon 9615..10310 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1192.t1.stop1Ggra1192.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000168_pilon 10308..10310 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1192.t1Ggra1192.t1Gracilaria gracilis GNS1m malepolypeptidetig00000168_pilon 9615..10310 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1192.t1 ID=Ggra1192.t1|Name=Ggra1192.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=232bp
MNLHRTGTIAEYIENHMKIRRKQLLAHAPGISDERLTVNFILPGLISDER
FSQRALSLMVDNPPQKFTETQHRLEIYENIVAHQSAAPSRLGTGFQPRST
GFPTRGTRPYRKRGRGRYDGQSQRSLRNAIQDISHKLDTLQASKPRRRRG
RSNVNQGTAHTDQIPEEILQNLQDLDNLHSTETKTQCTYTLDSAAHPSII
SHCTADQTNLKSTLNNTTAAPQSLQRWRKEP*
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spliced messenger RNA

>Ggra1192.t1 ID=Ggra1192.t1|Name=Ggra1192.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=696bp|location=Sequence derived from alignment at tig00000168_pilon:9615..10310+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAACTTACACCGTACTGGAACCATTGCCGAGTACATCGAAAACCACAT
GAAAATCAGACGCAAGCAGCTTCTAGCTCACGCTCCGGGCATCAGTGACG
AGCGCCTTACGGTTAATTTTATTCTTCCAGGCCTGATATCTGATGAAAGA
TTTAGTCAAAGAGCACTCTCTTTGATGGTGGATAACCCACCGCAGAAATT
CACCGAAACGCAGCATCGTCTTGAAATATATGAGAATATAGTTGCTCATC
AATCGGCCGCACCCTCTCGCCTAGGCACAGGCTTCCAGCCCCGCAGCACC
GGCTTTCCCACTAGGGGCACCCGTCCGTACCGTAAGAGAGGCAGAGGTCG
ATACGATGGACAAAGCCAACGCAGCCTTCGCAACGCTATCCAGGACATCA
GCCACAAATTAGATACCTTACAAGCATCTAAACCTCGTCGTAGGAGAGGT
CGTTCCAACGTCAATCAAGGTACCGCACATACGGACCAGATTCCGGAGGA
GATCCTGCAAAACCTGCAAGATCTTGACAATCTGCATAGCACAGAGACCA
AAACACAGTGTACGTATACACTAGACTCTGCAGCCCACCCCTCTATTATT
TCCCACTGCACCGCAGACCAAACGAACCTCAAGTCTACCCTCAACAACAC
AACGGCCGCGCCACAATCTCTGCAGAGGTGGAGAAAGGAACCCTGA
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protein sequence of Ggra1192.t1

>Ggra1192.t1 ID=Ggra1192.t1|Name=Ggra1192.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=232bp
MNLHRTGTIAEYIENHMKIRRKQLLAHAPGISDERLTVNFILPGLISDER
FSQRALSLMVDNPPQKFTETQHRLEIYENIVAHQSAAPSRLGTGFQPRST
GFPTRGTRPYRKRGRGRYDGQSQRSLRNAIQDISHKLDTLQASKPRRRRG
RSNVNQGTAHTDQIPEEILQNLQDLDNLHSTETKTQCTYTLDSAAHPSII
SHCTADQTNLKSTLNNTTAAPQSLQRWRKEP*
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mRNA from alignment at tig00000168_pilon:9615..10310+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1192.t1 ID=Ggra1192.t1|Name=Ggra1192.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=696bp|location=Sequence derived from alignment at tig00000168_pilon:9615..10310+ (Gracilaria gracilis GNS1m male)
ATGAACTTACACCGTACTGGAACCATTGCCGAGTACATCGAAAACCACAT
GAAAATCAGACGCAAGCAGCTTCTAGCTCACGCTCCGGGCATCAGTGACG
AGCGCCTTACGGTTAATTTTATTCTTCCAGGCCTGATATCTGATGAAAGA
TTTAGTCAAAGAGCACTCTCTTTGATGGTGGATAACCCACCGCAGAAATT
CACCGAAACGCAGCATCGTCTTGAAATATATGAGAATATAGTTGCTCATC
AATCGGCCGCACCCTCTCGCCTAGGCACAGGCTTCCAGCCCCGCAGCACC
GGCTTTCCCACTAGGGGCACCCGTCCGTACCGTAAGAGAGGCAGAGGTCG
ATACGATGGACAAAGCCAACGCAGCCTTCGCAACGCTATCCAGGACATCA
GCCACAAATTAGATACCTTACAAGCATCTAAACCTCGTCGTAGGAGAGGT
CGTTCCAACGTCAATCAAGGTACCGCACATACGGACCAGATTCCGGAGGA
GATCCTGCAAAACCTGCAAGATCTTGACAATCTGCATAGCACAGAGACCA
AAACACAGTGTACGTATACACTAGACTCTGCAGCCCACCCCTCTATTATT
TCCCACTGCACCGCAGACCAAACGAACCTCAAGTCTACCCTCAACAACAC
AACGGCCGCGCCACAATCTCTGCAGAGGTGGAGAAAGGAACCCTGA
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Coding sequence (CDS) from alignment at tig00000168_pilon:9615..10310+

>Ggra1192.t1 ID=Ggra1192.t1|Name=Ggra1192.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=696bp|location=Sequence derived from alignment at tig00000168_pilon:9615..10310+ (Gracilaria gracilis GNS1m male)
ATGAACTTACACCGTACTGGAACCATTGCCGAGTACATCGAAAACCACAT
GAAAATCAGACGCAAGCAGCTTCTAGCTCACGCTCCGGGCATCAGTGACG
AGCGCCTTACGGTTAATTTTATTCTTCCAGGCCTGATATCTGATGAAAGA
TTTAGTCAAAGAGCACTCTCTTTGATGGTGGATAACCCACCGCAGAAATT
CACCGAAACGCAGCATCGTCTTGAAATATATGAGAATATAGTTGCTCATC
AATCGGCCGCACCCTCTCGCCTAGGCACAGGCTTCCAGCCCCGCAGCACC
GGCTTTCCCACTAGGGGCACCCGTCCGTACCGTAAGAGAGGCAGAGGTCG
ATACGATGGACAAAGCCAACGCAGCCTTCGCAACGCTATCCAGGACATCA
GCCACAAATTAGATACCTTACAAGCATCTAAACCTCGTCGTAGGAGAGGT
CGTTCCAACGTCAATCAAGGTACCGCACATACGGACCAGATTCCGGAGGA
GATCCTGCAAAACCTGCAAGATCTTGACAATCTGCATAGCACAGAGACCA
AAACACAGTGTACGTATACACTAGACTCTGCAGCCCACCCCTCTATTATT
TCCCACTGCACCGCAGACCAAACGAACCTCAAGTCTACCCTCAACAACAC
AACGGCCGCGCCACAATCTCTGCAGAGGTGGAGAAAGGAACCCTGA
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