Ggra11094.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra11094.t1
Unique NameGgra11094.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length565
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000207_piloncontigtig00000207_pilon:98070..99764 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog130081.XP_005705620.1
Preferred nameEGY1
PFAMsPeptidase_M50
Max annot lvl2759|Eukaryota
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006508,GO:0006807,GO:0006950,GO:0006970,GO:0006996,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009314,GO:0009416,GO:0009507,GO:0009536,GO:0009605,GO:0009606,GO:0009628,GO:0009629,GO:0009630,GO:0009651,GO:0009657,GO:0009658,GO:0009668,GO:0009719,GO:0009723,GO:0009725,GO:0009959,GO:0009987,GO:0010027,GO:0010033,GO:0010207,GO:0015979,GO:0016043,GO:0016787,GO:0019538,GO:0019684,GO:0022607,GO:0034622,GO:0042221,GO:0043157,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0048564,GO:0050896,GO:0060359,GO:0061024,GO:0065003,GO:0070011,GO:0071704,GO:0071840,GO:0140096,GO:1901564,GO:1901698
Evalue2.51e-133
EggNOG OGsCOG0750@1|root,2QUAP@2759|Eukaryota
Descriptionresponse to cation stress
COG categoryM
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11094Ggra11094Gracilaria gracilis GNS1m malegenetig00000207_pilon 98070..99764 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11094.t1.stop1Ggra11094.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000207_pilon 98070..98072 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11094.t1.CDS1Ggra11094.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000207_pilon 98070..99764 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11094.t1.exon1Ggra11094.t1.exon1Gracilaria gracilis GNS1m maleexontig00000207_pilon 98070..99764 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11094.t1.start1Ggra11094.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000207_pilon 99762..99764 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11094.t1Ggra11094.t1Gracilaria gracilis GNS1m malepolypeptidetig00000207_pilon 98070..99764 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra11094.t1 ID=Ggra11094.t1|Name=Ggra11094.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=565bp
MLNVPAFLNVSPLLPTAHRSRRSVCRPIRPRVFRYAPVCAAQGETTQSSP
SQIPNGSAEPSVTETTLTPEQRKEKARLARLEAERLELMAAKARLEFERA
ELQAERKRLELDKMKSLKDKHDLGKPRPSPEQQNPYEENQPEHNSGKKPV
PGVPPPLTAGSLSEMLSAEFPRVSEKDIEIIKEKLCGMKTYFVTEVDRSP
FDERVVFRGNLRQAPDKLLEELEALAKKEGISERVRLFLLYDPKDSMDGD
EKRPVLVALPAAAKPNETTTFSAVFAVVLAFAACFTTFSYGIGIFGLTPE
VITEIAKGSVEEALLTVPVSAGAIVISLIHEIGHRIAASFRGIKVGLPFF
IPSLQIGTYGTVTPLESYPRLRKDMFDFAVAGPIAGTVASLVALVAGLVF
TGSGQVADWFPQIPSSLFHASVLVGAVADIILPAGLREQATIAVHPLTVI
GYTGLLVNALNLMPIGRLDGGRIVQALYGRVVAGRATAVTLLLQGLSSLV
GNSPLLLFWGLICVFLQRESDYPCQNEVIEPDGTRTAIGLATLCLMLLIL
IPFPDQIGDILGQY*
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spliced messenger RNA

>Ggra11094.t1 ID=Ggra11094.t1|Name=Ggra11094.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1695bp|location=Sequence derived from alignment at tig00000207_pilon:98070..99764- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTCAACGTCCCGGCCTTTCTAAACGTGTCTCCACTACTCCCTACCGC
CCATCGCTCTCGTCGTAGCGTATGTCGCCCGATTCGTCCGCGCGTCTTTC
GTTACGCCCCAGTATGTGCCGCGCAGGGAGAGACTACGCAATCATCGCCG
TCTCAAATTCCAAATGGAAGTGCTGAACCTTCAGTTACTGAAACCACCCT
CACGCCGGAACAGCGCAAGGAGAAGGCACGTCTTGCCCGTCTGGAAGCTG
AGCGGTTAGAGCTTATGGCGGCAAAAGCTCGTTTGGAGTTCGAGCGTGCT
GAATTGCAGGCGGAACGAAAGCGCTTAGAGTTGGATAAAATGAAATCTTT
GAAGGATAAGCATGATCTTGGCAAGCCACGCCCATCTCCTGAACAACAAA
ATCCCTACGAAGAAAATCAGCCTGAACATAACAGTGGAAAGAAACCTGTG
CCTGGAGTGCCGCCGCCACTCACGGCCGGTTCGCTCTCTGAAATGCTGAG
TGCCGAGTTTCCGCGCGTGTCTGAGAAGGATATAGAAATCATCAAAGAAA
AGCTGTGCGGAATGAAGACGTACTTCGTTACTGAAGTGGACAGATCTCCA
TTCGATGAACGCGTTGTATTCCGAGGAAACTTGAGACAAGCCCCCGATAA
ATTGCTCGAGGAACTTGAAGCATTGGCGAAAAAGGAAGGTATATCGGAAC
GAGTACGCCTTTTTCTCCTATATGATCCAAAGGATTCTATGGACGGCGAC
GAAAAGCGGCCAGTTTTGGTTGCGCTGCCAGCTGCCGCCAAACCTAATGA
GACAACCACCTTTAGTGCTGTCTTTGCAGTTGTCCTTGCTTTTGCTGCAT
GCTTCACCACCTTTTCGTACGGCATTGGAATTTTCGGTCTTACTCCGGAG
GTTATCACTGAGATCGCTAAGGGTAGCGTGGAAGAGGCTCTGCTTACCGT
TCCCGTCTCTGCCGGTGCGATTGTCATTTCTCTTATTCATGAGATTGGTC
ATCGCATAGCAGCATCTTTTCGTGGAATCAAAGTAGGTCTGCCGTTTTTC
ATTCCAAGTCTACAGATTGGTACCTATGGAACTGTTACTCCCCTGGAGAG
CTACCCGCGATTAAGGAAGGATATGTTCGATTTTGCTGTCGCAGGGCCTA
TAGCGGGAACGGTCGCAAGCCTTGTGGCGTTGGTAGCGGGGCTTGTATTT
ACCGGAAGTGGACAGGTTGCAGACTGGTTTCCACAAATCCCTTCCTCTTT
GTTCCATGCATCGGTTCTTGTTGGGGCTGTGGCTGATATCATTTTGCCGG
CGGGATTGAGAGAACAGGCAACGATTGCTGTTCATCCTTTGACAGTGATT
GGGTACACCGGGTTGCTAGTTAATGCTCTGAACCTAATGCCTATCGGAAG
ACTGGACGGTGGACGCATAGTCCAGGCGCTCTACGGCCGAGTAGTTGCCG
GCAGGGCAACTGCTGTCACACTGCTACTACAGGGACTTAGCTCTCTGGTT
GGAAACTCTCCTTTGCTTTTGTTCTGGGGTCTTATATGTGTGTTCTTGCA
AAGAGAAAGTGACTACCCCTGCCAAAACGAAGTAATTGAACCAGATGGTA
CACGCACCGCCATTGGGTTGGCAACGCTATGTTTGATGCTCCTAATTCTG
ATTCCATTTCCAGATCAGATTGGAGATATCCTTGGACAATACTAG
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protein sequence of Ggra11094.t1

>Ggra11094.t1 ID=Ggra11094.t1|Name=Ggra11094.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=565bp
MLNVPAFLNVSPLLPTAHRSRRSVCRPIRPRVFRYAPVCAAQGETTQSSP
SQIPNGSAEPSVTETTLTPEQRKEKARLARLEAERLELMAAKARLEFERA
ELQAERKRLELDKMKSLKDKHDLGKPRPSPEQQNPYEENQPEHNSGKKPV
PGVPPPLTAGSLSEMLSAEFPRVSEKDIEIIKEKLCGMKTYFVTEVDRSP
FDERVVFRGNLRQAPDKLLEELEALAKKEGISERVRLFLLYDPKDSMDGD
EKRPVLVALPAAAKPNETTTFSAVFAVVLAFAACFTTFSYGIGIFGLTPE
VITEIAKGSVEEALLTVPVSAGAIVISLIHEIGHRIAASFRGIKVGLPFF
IPSLQIGTYGTVTPLESYPRLRKDMFDFAVAGPIAGTVASLVALVAGLVF
TGSGQVADWFPQIPSSLFHASVLVGAVADIILPAGLREQATIAVHPLTVI
GYTGLLVNALNLMPIGRLDGGRIVQALYGRVVAGRATAVTLLLQGLSSLV
GNSPLLLFWGLICVFLQRESDYPCQNEVIEPDGTRTAIGLATLCLMLLIL
IPFPDQIGDILGQY*
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mRNA from alignment at tig00000207_pilon:98070..99764-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra11094.t1 ID=Ggra11094.t1|Name=Ggra11094.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1695bp|location=Sequence derived from alignment at tig00000207_pilon:98070..99764- (Gracilaria gracilis GNS1m male)
ATGCTCAACGTCCCGGCCTTTCTAAACGTGTCTCCACTACTCCCTACCGC
CCATCGCTCTCGTCGTAGCGTATGTCGCCCGATTCGTCCGCGCGTCTTTC
GTTACGCCCCAGTATGTGCCGCGCAGGGAGAGACTACGCAATCATCGCCG
TCTCAAATTCCAAATGGAAGTGCTGAACCTTCAGTTACTGAAACCACCCT
CACGCCGGAACAGCGCAAGGAGAAGGCACGTCTTGCCCGTCTGGAAGCTG
AGCGGTTAGAGCTTATGGCGGCAAAAGCTCGTTTGGAGTTCGAGCGTGCT
GAATTGCAGGCGGAACGAAAGCGCTTAGAGTTGGATAAAATGAAATCTTT
GAAGGATAAGCATGATCTTGGCAAGCCACGCCCATCTCCTGAACAACAAA
ATCCCTACGAAGAAAATCAGCCTGAACATAACAGTGGAAAGAAACCTGTG
CCTGGAGTGCCGCCGCCACTCACGGCCGGTTCGCTCTCTGAAATGCTGAG
TGCCGAGTTTCCGCGCGTGTCTGAGAAGGATATAGAAATCATCAAAGAAA
AGCTGTGCGGAATGAAGACGTACTTCGTTACTGAAGTGGACAGATCTCCA
TTCGATGAACGCGTTGTATTCCGAGGAAACTTGAGACAAGCCCCCGATAA
ATTGCTCGAGGAACTTGAAGCATTGGCGAAAAAGGAAGGTATATCGGAAC
GAGTACGCCTTTTTCTCCTATATGATCCAAAGGATTCTATGGACGGCGAC
GAAAAGCGGCCAGTTTTGGTTGCGCTGCCAGCTGCCGCCAAACCTAATGA
GACAACCACCTTTAGTGCTGTCTTTGCAGTTGTCCTTGCTTTTGCTGCAT
GCTTCACCACCTTTTCGTACGGCATTGGAATTTTCGGTCTTACTCCGGAG
GTTATCACTGAGATCGCTAAGGGTAGCGTGGAAGAGGCTCTGCTTACCGT
TCCCGTCTCTGCCGGTGCGATTGTCATTTCTCTTATTCATGAGATTGGTC
ATCGCATAGCAGCATCTTTTCGTGGAATCAAAGTAGGTCTGCCGTTTTTC
ATTCCAAGTCTACAGATTGGTACCTATGGAACTGTTACTCCCCTGGAGAG
CTACCCGCGATTAAGGAAGGATATGTTCGATTTTGCTGTCGCAGGGCCTA
TAGCGGGAACGGTCGCAAGCCTTGTGGCGTTGGTAGCGGGGCTTGTATTT
ACCGGAAGTGGACAGGTTGCAGACTGGTTTCCACAAATCCCTTCCTCTTT
GTTCCATGCATCGGTTCTTGTTGGGGCTGTGGCTGATATCATTTTGCCGG
CGGGATTGAGAGAACAGGCAACGATTGCTGTTCATCCTTTGACAGTGATT
GGGTACACCGGGTTGCTAGTTAATGCTCTGAACCTAATGCCTATCGGAAG
ACTGGACGGTGGACGCATAGTCCAGGCGCTCTACGGCCGAGTAGTTGCCG
GCAGGGCAACTGCTGTCACACTGCTACTACAGGGACTTAGCTCTCTGGTT
GGAAACTCTCCTTTGCTTTTGTTCTGGGGTCTTATATGTGTGTTCTTGCA
AAGAGAAAGTGACTACCCCTGCCAAAACGAAGTAATTGAACCAGATGGTA
CACGCACCGCCATTGGGTTGGCAACGCTATGTTTGATGCTCCTAATTCTG
ATTCCATTTCCAGATCAGATTGGAGATATCCTTGGACAATACTAG
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Coding sequence (CDS) from alignment at tig00000207_pilon:98070..99764-

>Ggra11094.t1 ID=Ggra11094.t1|Name=Ggra11094.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1695bp|location=Sequence derived from alignment at tig00000207_pilon:98070..99764- (Gracilaria gracilis GNS1m male)
ATGCTCAACGTCCCGGCCTTTCTAAACGTGTCTCCACTACTCCCTACCGC
CCATCGCTCTCGTCGTAGCGTATGTCGCCCGATTCGTCCGCGCGTCTTTC
GTTACGCCCCAGTATGTGCCGCGCAGGGAGAGACTACGCAATCATCGCCG
TCTCAAATTCCAAATGGAAGTGCTGAACCTTCAGTTACTGAAACCACCCT
CACGCCGGAACAGCGCAAGGAGAAGGCACGTCTTGCCCGTCTGGAAGCTG
AGCGGTTAGAGCTTATGGCGGCAAAAGCTCGTTTGGAGTTCGAGCGTGCT
GAATTGCAGGCGGAACGAAAGCGCTTAGAGTTGGATAAAATGAAATCTTT
GAAGGATAAGCATGATCTTGGCAAGCCACGCCCATCTCCTGAACAACAAA
ATCCCTACGAAGAAAATCAGCCTGAACATAACAGTGGAAAGAAACCTGTG
CCTGGAGTGCCGCCGCCACTCACGGCCGGTTCGCTCTCTGAAATGCTGAG
TGCCGAGTTTCCGCGCGTGTCTGAGAAGGATATAGAAATCATCAAAGAAA
AGCTGTGCGGAATGAAGACGTACTTCGTTACTGAAGTGGACAGATCTCCA
TTCGATGAACGCGTTGTATTCCGAGGAAACTTGAGACAAGCCCCCGATAA
ATTGCTCGAGGAACTTGAAGCATTGGCGAAAAAGGAAGGTATATCGGAAC
GAGTACGCCTTTTTCTCCTATATGATCCAAAGGATTCTATGGACGGCGAC
GAAAAGCGGCCAGTTTTGGTTGCGCTGCCAGCTGCCGCCAAACCTAATGA
GACAACCACCTTTAGTGCTGTCTTTGCAGTTGTCCTTGCTTTTGCTGCAT
GCTTCACCACCTTTTCGTACGGCATTGGAATTTTCGGTCTTACTCCGGAG
GTTATCACTGAGATCGCTAAGGGTAGCGTGGAAGAGGCTCTGCTTACCGT
TCCCGTCTCTGCCGGTGCGATTGTCATTTCTCTTATTCATGAGATTGGTC
ATCGCATAGCAGCATCTTTTCGTGGAATCAAAGTAGGTCTGCCGTTTTTC
ATTCCAAGTCTACAGATTGGTACCTATGGAACTGTTACTCCCCTGGAGAG
CTACCCGCGATTAAGGAAGGATATGTTCGATTTTGCTGTCGCAGGGCCTA
TAGCGGGAACGGTCGCAAGCCTTGTGGCGTTGGTAGCGGGGCTTGTATTT
ACCGGAAGTGGACAGGTTGCAGACTGGTTTCCACAAATCCCTTCCTCTTT
GTTCCATGCATCGGTTCTTGTTGGGGCTGTGGCTGATATCATTTTGCCGG
CGGGATTGAGAGAACAGGCAACGATTGCTGTTCATCCTTTGACAGTGATT
GGGTACACCGGGTTGCTAGTTAATGCTCTGAACCTAATGCCTATCGGAAG
ACTGGACGGTGGACGCATAGTCCAGGCGCTCTACGGCCGAGTAGTTGCCG
GCAGGGCAACTGCTGTCACACTGCTACTACAGGGACTTAGCTCTCTGGTT
GGAAACTCTCCTTTGCTTTTGTTCTGGGGTCTTATATGTGTGTTCTTGCA
AAGAGAAAGTGACTACCCCTGCCAAAACGAAGTAATTGAACCAGATGGTA
CACGCACCGCCATTGGGTTGGCAACGCTATGTTTGATGCTCCTAATTCTG
ATTCCATTTCCAGATCAGATTGGAGATATCCTTGGACAATACTAG
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