Ggra11093.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra11093.t1
Unique NameGgra11093.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length300
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000207_piloncontigtig00000207_pilon:96724..97623 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11093Ggra11093Gracilaria gracilis GNS1m malegenetig00000207_pilon 96724..97623 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11093.t1.start1Ggra11093.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000207_pilon 96724..96726 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11093.t1.CDS1Ggra11093.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000207_pilon 96724..97623 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11093.t1.exon1Ggra11093.t1.exon1Gracilaria gracilis GNS1m maleexontig00000207_pilon 96724..97623 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11093.t1.stop1Ggra11093.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000207_pilon 97621..97623 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11093.t1Ggra11093.t1Gracilaria gracilis GNS1m malepolypeptidetig00000207_pilon 96724..97623 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra11093.t1 ID=Ggra11093.t1|Name=Ggra11093.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=300bp
MASGKITGRAEKDEVFWTELEIRRLGNVVAECINARRYIGDANRAEGERK
KMRAYIEAMKRKSMRVLHRAELYARSGHAAWPGIDPTITDPVSLAEEYVR
VVENYEAVLSEEEGRAKLVRAENIADTDSGAIKDLEITREEWEKADDLAY
REALHDEKNDKQRSESARRGLFDDTDGLRRRKGAAGSSEVKKGTLSKEDE
ELMARHQPIQDELTSNLVDLVGQLKESVTNNNEKLKKDSKVLDKTEDAVE
KNISGITRHRTNLREYGQTTTVSWWLMMIAVIVMVVIFVLLLILMRIPI*
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spliced messenger RNA

>Ggra11093.t1 ID=Ggra11093.t1|Name=Ggra11093.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=900bp|location=Sequence derived from alignment at tig00000207_pilon:96724..97623+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCAGTGGGAAAATAACTGGAAGGGCAGAGAAGGATGAAGTCTTTTG
GACAGAACTAGAAATAAGACGCCTTGGTAACGTCGTTGCAGAGTGCATAA
ACGCAAGGAGGTACATTGGGGATGCCAATAGAGCGGAAGGAGAACGAAAA
AAAATGCGGGCCTACATTGAGGCCATGAAACGGAAATCCATGCGAGTTCT
TCACCGGGCAGAGTTATACGCCCGAAGTGGTCACGCTGCATGGCCAGGAA
TAGACCCAACCATCACCGATCCTGTGAGTCTGGCAGAGGAGTACGTTCGT
GTCGTTGAAAACTACGAAGCGGTTCTGTCCGAAGAAGAAGGGCGTGCGAA
GTTGGTAAGAGCAGAAAATATTGCTGATACTGACAGCGGAGCCATCAAGG
ATTTGGAAATTACAAGAGAAGAATGGGAGAAGGCCGATGATCTTGCGTAC
AGAGAGGCGCTTCATGATGAAAAAAATGACAAACAAAGATCAGAGTCAGC
CCGAAGAGGCCTATTTGACGACACAGATGGACTGCGGCGGCGAAAGGGAG
CTGCCGGTTCGTCAGAGGTCAAGAAAGGTACTTTATCCAAAGAAGACGAA
GAACTAATGGCTCGTCATCAGCCGATTCAAGATGAATTAACATCCAATCT
TGTTGACCTCGTTGGTCAGCTCAAGGAAAGCGTAACTAACAACAACGAAA
AGCTTAAGAAAGATAGCAAGGTTCTTGACAAGACAGAGGACGCTGTTGAG
AAGAACATCTCTGGAATTACGAGACATAGAACTAATCTCAGGGAGTATGG
CCAGACCACGACGGTTTCTTGGTGGTTAATGATGATTGCGGTCATCGTTA
TGGTTGTCATATTTGTCCTTCTCTTGATTCTTATGAGAATTCCCATCTAA
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protein sequence of Ggra11093.t1

>Ggra11093.t1 ID=Ggra11093.t1|Name=Ggra11093.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=300bp
MASGKITGRAEKDEVFWTELEIRRLGNVVAECINARRYIGDANRAEGERK
KMRAYIEAMKRKSMRVLHRAELYARSGHAAWPGIDPTITDPVSLAEEYVR
VVENYEAVLSEEEGRAKLVRAENIADTDSGAIKDLEITREEWEKADDLAY
REALHDEKNDKQRSESARRGLFDDTDGLRRRKGAAGSSEVKKGTLSKEDE
ELMARHQPIQDELTSNLVDLVGQLKESVTNNNEKLKKDSKVLDKTEDAVE
KNISGITRHRTNLREYGQTTTVSWWLMMIAVIVMVVIFVLLLILMRIPI*
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mRNA from alignment at tig00000207_pilon:96724..97623+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra11093.t1 ID=Ggra11093.t1|Name=Ggra11093.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=900bp|location=Sequence derived from alignment at tig00000207_pilon:96724..97623+ (Gracilaria gracilis GNS1m male)
ATGGCCAGTGGGAAAATAACTGGAAGGGCAGAGAAGGATGAAGTCTTTTG
GACAGAACTAGAAATAAGACGCCTTGGTAACGTCGTTGCAGAGTGCATAA
ACGCAAGGAGGTACATTGGGGATGCCAATAGAGCGGAAGGAGAACGAAAA
AAAATGCGGGCCTACATTGAGGCCATGAAACGGAAATCCATGCGAGTTCT
TCACCGGGCAGAGTTATACGCCCGAAGTGGTCACGCTGCATGGCCAGGAA
TAGACCCAACCATCACCGATCCTGTGAGTCTGGCAGAGGAGTACGTTCGT
GTCGTTGAAAACTACGAAGCGGTTCTGTCCGAAGAAGAAGGGCGTGCGAA
GTTGGTAAGAGCAGAAAATATTGCTGATACTGACAGCGGAGCCATCAAGG
ATTTGGAAATTACAAGAGAAGAATGGGAGAAGGCCGATGATCTTGCGTAC
AGAGAGGCGCTTCATGATGAAAAAAATGACAAACAAAGATCAGAGTCAGC
CCGAAGAGGCCTATTTGACGACACAGATGGACTGCGGCGGCGAAAGGGAG
CTGCCGGTTCGTCAGAGGTCAAGAAAGGTACTTTATCCAAAGAAGACGAA
GAACTAATGGCTCGTCATCAGCCGATTCAAGATGAATTAACATCCAATCT
TGTTGACCTCGTTGGTCAGCTCAAGGAAAGCGTAACTAACAACAACGAAA
AGCTTAAGAAAGATAGCAAGGTTCTTGACAAGACAGAGGACGCTGTTGAG
AAGAACATCTCTGGAATTACGAGACATAGAACTAATCTCAGGGAGTATGG
CCAGACCACGACGGTTTCTTGGTGGTTAATGATGATTGCGGTCATCGTTA
TGGTTGTCATATTTGTCCTTCTCTTGATTCTTATGAGAATTCCCATCTAA
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Coding sequence (CDS) from alignment at tig00000207_pilon:96724..97623+

>Ggra11093.t1 ID=Ggra11093.t1|Name=Ggra11093.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=900bp|location=Sequence derived from alignment at tig00000207_pilon:96724..97623+ (Gracilaria gracilis GNS1m male)
ATGGCCAGTGGGAAAATAACTGGAAGGGCAGAGAAGGATGAAGTCTTTTG
GACAGAACTAGAAATAAGACGCCTTGGTAACGTCGTTGCAGAGTGCATAA
ACGCAAGGAGGTACATTGGGGATGCCAATAGAGCGGAAGGAGAACGAAAA
AAAATGCGGGCCTACATTGAGGCCATGAAACGGAAATCCATGCGAGTTCT
TCACCGGGCAGAGTTATACGCCCGAAGTGGTCACGCTGCATGGCCAGGAA
TAGACCCAACCATCACCGATCCTGTGAGTCTGGCAGAGGAGTACGTTCGT
GTCGTTGAAAACTACGAAGCGGTTCTGTCCGAAGAAGAAGGGCGTGCGAA
GTTGGTAAGAGCAGAAAATATTGCTGATACTGACAGCGGAGCCATCAAGG
ATTTGGAAATTACAAGAGAAGAATGGGAGAAGGCCGATGATCTTGCGTAC
AGAGAGGCGCTTCATGATGAAAAAAATGACAAACAAAGATCAGAGTCAGC
CCGAAGAGGCCTATTTGACGACACAGATGGACTGCGGCGGCGAAAGGGAG
CTGCCGGTTCGTCAGAGGTCAAGAAAGGTACTTTATCCAAAGAAGACGAA
GAACTAATGGCTCGTCATCAGCCGATTCAAGATGAATTAACATCCAATCT
TGTTGACCTCGTTGGTCAGCTCAAGGAAAGCGTAACTAACAACAACGAAA
AGCTTAAGAAAGATAGCAAGGTTCTTGACAAGACAGAGGACGCTGTTGAG
AAGAACATCTCTGGAATTACGAGACATAGAACTAATCTCAGGGAGTATGG
CCAGACCACGACGGTTTCTTGGTGGTTAATGATGATTGCGGTCATCGTTA
TGGTTGTCATATTTGTCCTTCTCTTGATTCTTATGAGAATTCCCATCTAA
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