Ggra10968.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10968.t1
Unique NameGgra10968.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length256
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000938_piloncontigtig00000938_pilon:122649..123416 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10968Ggra10968Gracilaria gracilis GNS1m malegenetig00000938_pilon 122649..123416 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10968.t1.stop1Ggra10968.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000938_pilon 122649..122651 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10968.t1.CDS1Ggra10968.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000938_pilon 122649..123416 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10968.t1.exon1Ggra10968.t1.exon1Gracilaria gracilis GNS1m maleexontig00000938_pilon 122649..123416 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10968.t1.start1Ggra10968.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000938_pilon 123414..123416 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10968.t1Ggra10968.t1Gracilaria gracilis GNS1m malepolypeptidetig00000938_pilon 122649..123416 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10968.t1 ID=Ggra10968.t1|Name=Ggra10968.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=256bp
MPLVPHMLQALLPRRHRPAPPPPPATPPLPPPPPPPPSARAPSPLPLPLP
SPLPLPPPPSTRAADVSTPPSAPPALALAPPRAPRLPRASLASVSRLQAL
LAAHPSARLALRRVAVHASRGELYWAGAVSFDARLIGDRSCTQCAAYSYS
LPQRSAVNERLPHALHVSDARLMAVQQALSLMVSERATWLLRLSPVDRFG
NETVSAPFMSALLALQTRQHAVAVSCAAGQWLFWPLLFPLYGLCLVGVFV
PTACA*
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spliced messenger RNA

>Ggra10968.t1 ID=Ggra10968.t1|Name=Ggra10968.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=768bp|location=Sequence derived from alignment at tig00000938_pilon:122649..123416- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGCTGGTGCCGCACATGTTGCAGGCGCTTCTGCCTCGCCGCCACCG
CCCCGCGCCACCGCCTCCCCCCGCCACGCCGCCTCTACCGCCTCCACCGC
CTCCGCCGCCGTCTGCGCGCGCGCCGTCGCCGTTGCCGTTGCCGTTGCCG
TCGCCGCTGCCGCTCCCGCCGCCGCCTTCCACGCGTGCGGCCGACGTGAG
CACGCCGCCGAGCGCGCCGCCGGCGCTGGCGCTGGCGCCGCCGCGTGCGC
CCAGGCTGCCGCGCGCTTCGCTGGCGTCGGTGTCGCGCTTGCAGGCGTTG
CTGGCGGCGCATCCTAGCGCGCGGCTGGCGCTGCGGCGCGTGGCGGTGCA
CGCCTCGCGCGGCGAGCTGTATTGGGCGGGTGCTGTTTCGTTTGACGCGC
GGCTGATTGGCGACCGCTCCTGTACGCAGTGCGCGGCGTATTCGTACTCG
TTGCCGCAGCGCTCCGCGGTGAACGAGCGCCTTCCGCACGCGTTGCATGT
GAGTGACGCGCGCTTGATGGCGGTGCAGCAGGCGCTGTCGCTCATGGTGA
GCGAGCGCGCTACGTGGTTGCTGCGCCTTTCGCCGGTGGATCGCTTCGGC
AATGAGACGGTGAGCGCGCCGTTCATGAGCGCGTTGCTGGCGCTGCAGAC
GCGCCAGCACGCGGTGGCTGTGAGTTGTGCGGCAGGCCAATGGCTGTTCT
GGCCGCTGTTGTTCCCGCTGTACGGACTTTGTCTGGTGGGCGTGTTTGTA
CCTACCGCTTGTGCCTAA
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protein sequence of Ggra10968.t1

>Ggra10968.t1 ID=Ggra10968.t1|Name=Ggra10968.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=256bp
MPLVPHMLQALLPRRHRPAPPPPPATPPLPPPPPPPPSARAPSPLPLPLP
SPLPLPPPPSTRAADVSTPPSAPPALALAPPRAPRLPRASLASVSRLQAL
LAAHPSARLALRRVAVHASRGELYWAGAVSFDARLIGDRSCTQCAAYSYS
LPQRSAVNERLPHALHVSDARLMAVQQALSLMVSERATWLLRLSPVDRFG
NETVSAPFMSALLALQTRQHAVAVSCAAGQWLFWPLLFPLYGLCLVGVFV
PTACA*
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mRNA from alignment at tig00000938_pilon:122649..123416-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10968.t1 ID=Ggra10968.t1|Name=Ggra10968.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=768bp|location=Sequence derived from alignment at tig00000938_pilon:122649..123416- (Gracilaria gracilis GNS1m male)
ATGCCGCTGGTGCCGCACATGTTGCAGGCGCTTCTGCCTCGCCGCCACCG
CCCCGCGCCACCGCCTCCCCCCGCCACGCCGCCTCTACCGCCTCCACCGC
CTCCGCCGCCGTCTGCGCGCGCGCCGTCGCCGTTGCCGTTGCCGTTGCCG
TCGCCGCTGCCGCTCCCGCCGCCGCCTTCCACGCGTGCGGCCGACGTGAG
CACGCCGCCGAGCGCGCCGCCGGCGCTGGCGCTGGCGCCGCCGCGTGCGC
CCAGGCTGCCGCGCGCTTCGCTGGCGTCGGTGTCGCGCTTGCAGGCGTTG
CTGGCGGCGCATCCTAGCGCGCGGCTGGCGCTGCGGCGCGTGGCGGTGCA
CGCCTCGCGCGGCGAGCTGTATTGGGCGGGTGCTGTTTCGTTTGACGCGC
GGCTGATTGGCGACCGCTCCTGTACGCAGTGCGCGGCGTATTCGTACTCG
TTGCCGCAGCGCTCCGCGGTGAACGAGCGCCTTCCGCACGCGTTGCATGT
GAGTGACGCGCGCTTGATGGCGGTGCAGCAGGCGCTGTCGCTCATGGTGA
GCGAGCGCGCTACGTGGTTGCTGCGCCTTTCGCCGGTGGATCGCTTCGGC
AATGAGACGGTGAGCGCGCCGTTCATGAGCGCGTTGCTGGCGCTGCAGAC
GCGCCAGCACGCGGTGGCTGTGAGTTGTGCGGCAGGCCAATGGCTGTTCT
GGCCGCTGTTGTTCCCGCTGTACGGACTTTGTCTGGTGGGCGTGTTTGTA
CCTACCGCTTGTGCCTAA
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Coding sequence (CDS) from alignment at tig00000938_pilon:122649..123416-

>Ggra10968.t1 ID=Ggra10968.t1|Name=Ggra10968.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=768bp|location=Sequence derived from alignment at tig00000938_pilon:122649..123416- (Gracilaria gracilis GNS1m male)
ATGCCGCTGGTGCCGCACATGTTGCAGGCGCTTCTGCCTCGCCGCCACCG
CCCCGCGCCACCGCCTCCCCCCGCCACGCCGCCTCTACCGCCTCCACCGC
CTCCGCCGCCGTCTGCGCGCGCGCCGTCGCCGTTGCCGTTGCCGTTGCCG
TCGCCGCTGCCGCTCCCGCCGCCGCCTTCCACGCGTGCGGCCGACGTGAG
CACGCCGCCGAGCGCGCCGCCGGCGCTGGCGCTGGCGCCGCCGCGTGCGC
CCAGGCTGCCGCGCGCTTCGCTGGCGTCGGTGTCGCGCTTGCAGGCGTTG
CTGGCGGCGCATCCTAGCGCGCGGCTGGCGCTGCGGCGCGTGGCGGTGCA
CGCCTCGCGCGGCGAGCTGTATTGGGCGGGTGCTGTTTCGTTTGACGCGC
GGCTGATTGGCGACCGCTCCTGTACGCAGTGCGCGGCGTATTCGTACTCG
TTGCCGCAGCGCTCCGCGGTGAACGAGCGCCTTCCGCACGCGTTGCATGT
GAGTGACGCGCGCTTGATGGCGGTGCAGCAGGCGCTGTCGCTCATGGTGA
GCGAGCGCGCTACGTGGTTGCTGCGCCTTTCGCCGGTGGATCGCTTCGGC
AATGAGACGGTGAGCGCGCCGTTCATGAGCGCGTTGCTGGCGCTGCAGAC
GCGCCAGCACGCGGTGGCTGTGAGTTGTGCGGCAGGCCAATGGCTGTTCT
GGCCGCTGTTGTTCCCGCTGTACGGACTTTGTCTGGTGGGCGTGTTTGTA
CCTACCGCTTGTGCCTAA
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