Ggra10965.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10965.t1
Unique NameGgra10965.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length206
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000938_piloncontigtig00000938_pilon:116331..116948 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10965Ggra10965Gracilaria gracilis GNS1m malegenetig00000938_pilon 116331..116948 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10965.t1.start1Ggra10965.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000938_pilon 116331..116333 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10965.t1.CDS1Ggra10965.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000938_pilon 116331..116948 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10965.t1.exon1Ggra10965.t1.exon1Gracilaria gracilis GNS1m maleexontig00000938_pilon 116331..116948 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10965.t1.stop1Ggra10965.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000938_pilon 116946..116948 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10965.t1Ggra10965.t1Gracilaria gracilis GNS1m malepolypeptidetig00000938_pilon 116331..116948 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10965.t1 ID=Ggra10965.t1|Name=Ggra10965.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=206bp
LGVATPVSGGGQEVPLAGGGGGGELGGAGGGAGGGAGGGAGGGAVAAQLD
VSRVDCVLQAFGSNLDGKGIRIEIADDGFLCGEWDYSADHVFKQAAFVNG
EAEVPFSVQASIFELCMSYINVWVTVPYGGCQLLLRRIFKVDWGSWRNGS
TGLGSCRALEHICEGTTSAAAIPYIDVWCRRPPADGGQPEEMQAYWVFPQ
GNDQC*
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spliced messenger RNA

>Ggra10965.t1 ID=Ggra10965.t1|Name=Ggra10965.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=618bp|location=Sequence derived from alignment at tig00000938_pilon:116331..116948+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
TTGGGAGTGGCAACGCCAGTTTCAGGTGGGGGTCAGGAAGTGCCACTTGC
AGGCGGAGGAGGAGGAGGAGAGCTTGGAGGAGCGGGTGGAGGAGCGGGTG
GAGGAGCGGGTGGAGGAGCGGGTGGAGGGGCCGTTGCTGCACAATTGGAC
GTTTCTCGAGTGGACTGCGTTCTGCAGGCGTTTGGAAGCAATCTGGATGG
AAAAGGCATCCGAATCGAAATTGCAGACGATGGATTCCTGTGCGGAGAAT
GGGATTATTCTGCAGACCATGTGTTCAAGCAAGCGGCGTTTGTAAATGGC
GAGGCGGAGGTGCCGTTTTCTGTGCAGGCTAGTATTTTCGAACTTTGTAT
GTCGTACATAAACGTATGGGTGACCGTTCCGTACGGTGGGTGCCAGCTGT
TGTTGAGACGTATATTCAAGGTGGACTGGGGAAGCTGGAGAAACGGATCG
ACGGGGCTTGGCAGCTGCCGAGCGTTGGAACATATCTGTGAAGGAACGAC
GTCCGCAGCTGCTATACCGTACATTGATGTGTGGTGCAGACGTCCGCCTG
CAGATGGGGGTCAGCCGGAAGAGATGCAAGCTTATTGGGTATTTCCGCAG
GGCAATGATCAATGCTAA
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protein sequence of Ggra10965.t1

>Ggra10965.t1 ID=Ggra10965.t1|Name=Ggra10965.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=206bp
LGVATPVSGGGQEVPLAGGGGGGELGGAGGGAGGGAGGGAGGGAVAAQLD
VSRVDCVLQAFGSNLDGKGIRIEIADDGFLCGEWDYSADHVFKQAAFVNG
EAEVPFSVQASIFELCMSYINVWVTVPYGGCQLLLRRIFKVDWGSWRNGS
TGLGSCRALEHICEGTTSAAAIPYIDVWCRRPPADGGQPEEMQAYWVFPQ
GNDQC*
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mRNA from alignment at tig00000938_pilon:116331..116948+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10965.t1 ID=Ggra10965.t1|Name=Ggra10965.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=618bp|location=Sequence derived from alignment at tig00000938_pilon:116331..116948+ (Gracilaria gracilis GNS1m male)
TTGGGAGTGGCAACGCCAGTTTCAGGTGGGGGTCAGGAAGTGCCACTTGC
AGGCGGAGGAGGAGGAGGAGAGCTTGGAGGAGCGGGTGGAGGAGCGGGTG
GAGGAGCGGGTGGAGGAGCGGGTGGAGGGGCCGTTGCTGCACAATTGGAC
GTTTCTCGAGTGGACTGCGTTCTGCAGGCGTTTGGAAGCAATCTGGATGG
AAAAGGCATCCGAATCGAAATTGCAGACGATGGATTCCTGTGCGGAGAAT
GGGATTATTCTGCAGACCATGTGTTCAAGCAAGCGGCGTTTGTAAATGGC
GAGGCGGAGGTGCCGTTTTCTGTGCAGGCTAGTATTTTCGAACTTTGTAT
GTCGTACATAAACGTATGGGTGACCGTTCCGTACGGTGGGTGCCAGCTGT
TGTTGAGACGTATATTCAAGGTGGACTGGGGAAGCTGGAGAAACGGATCG
ACGGGGCTTGGCAGCTGCCGAGCGTTGGAACATATCTGTGAAGGAACGAC
GTCCGCAGCTGCTATACCGTACATTGATGTGTGGTGCAGACGTCCGCCTG
CAGATGGGGGTCAGCCGGAAGAGATGCAAGCTTATTGGGTATTTCCGCAG
GGCAATGATCAATGCTAA
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Coding sequence (CDS) from alignment at tig00000938_pilon:116331..116948+

>Ggra10965.t1 ID=Ggra10965.t1|Name=Ggra10965.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=618bp|location=Sequence derived from alignment at tig00000938_pilon:116331..116948+ (Gracilaria gracilis GNS1m male)
TTGGGAGTGGCAACGCCAGTTTCAGGTGGGGGTCAGGAAGTGCCACTTGC
AGGCGGAGGAGGAGGAGGAGAGCTTGGAGGAGCGGGTGGAGGAGCGGGTG
GAGGAGCGGGTGGAGGAGCGGGTGGAGGGGCCGTTGCTGCACAATTGGAC
GTTTCTCGAGTGGACTGCGTTCTGCAGGCGTTTGGAAGCAATCTGGATGG
AAAAGGCATCCGAATCGAAATTGCAGACGATGGATTCCTGTGCGGAGAAT
GGGATTATTCTGCAGACCATGTGTTCAAGCAAGCGGCGTTTGTAAATGGC
GAGGCGGAGGTGCCGTTTTCTGTGCAGGCTAGTATTTTCGAACTTTGTAT
GTCGTACATAAACGTATGGGTGACCGTTCCGTACGGTGGGTGCCAGCTGT
TGTTGAGACGTATATTCAAGGTGGACTGGGGAAGCTGGAGAAACGGATCG
ACGGGGCTTGGCAGCTGCCGAGCGTTGGAACATATCTGTGAAGGAACGAC
GTCCGCAGCTGCTATACCGTACATTGATGTGTGGTGCAGACGTCCGCCTG
CAGATGGGGGTCAGCCGGAAGAGATGCAAGCTTATTGGGTATTTCCGCAG
GGCAATGATCAATGCTAA
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