Ggra10903.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10903.t1
Unique NameGgra10903.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length391
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000098_piloncontigtig00000098_pilon:92813..93985 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10903Ggra10903Gracilaria gracilis GNS1m malegenetig00000098_pilon 92813..93985 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10903.t1.stop1Ggra10903.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000098_pilon 92813..92815 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10903.t1.CDS1Ggra10903.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000098_pilon 92813..93985 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10903.t1.exon1Ggra10903.t1.exon1Gracilaria gracilis GNS1m maleexontig00000098_pilon 92813..93985 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10903.t1.start1Ggra10903.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000098_pilon 93983..93985 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10903.t1Ggra10903.t1Gracilaria gracilis GNS1m malepolypeptidetig00000098_pilon 92813..93985 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10903.t1 ID=Ggra10903.t1|Name=Ggra10903.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=391bp
MARVRATSTALDAESSSERRDLPPIAGSLYEASSHPVPMQKPSPPQPMAF
PHSYATANCSSAPRTHSGHLHAVPTPMPVVYQTPASGGTAAAADFGASAV
RLLVRVTMLMMVVLPVSIFALYCTQSGRSNDPVKDLKRFARNEAINNKVQ
HIDDLSVSGLKLYAQATCVKGPTVTEVREALRAQLYEIPSAARDRIVASA
VIRGIDAVGTGQDTSSDIEDSGTAFSYLAYWNTKYNGGEVLLSDRYSTCA
MVAGVNVKAGEDIAGYETSTSKVKIGTKPCKCSMLWCVGRCDEYDTVTAR
KPIFKRNRLSLKQQGELHKWMVKQAVDHAESLVVTRNALSEKWNALFRGD
DDAPALTWKAPNADYSGDDSAGRNSERARNSDSEYAKQEL*
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spliced messenger RNA

>Ggra10903.t1 ID=Ggra10903.t1|Name=Ggra10903.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1173bp|location=Sequence derived from alignment at tig00000098_pilon:92813..93985- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCCGTGTGAGGGCGACTTCAACCGCGCTCGACGCTGAGAGCTCTTC
GGAGCGGCGGGATTTACCGCCCATCGCCGGCAGCTTGTACGAGGCGTCAT
CGCACCCTGTCCCAATGCAGAAGCCGTCTCCACCACAGCCAATGGCGTTC
CCACATTCCTATGCTACCGCTAATTGCAGCAGCGCCCCACGCACGCATTC
GGGACATCTTCACGCCGTGCCCACTCCAATGCCCGTTGTGTACCAAACGC
CTGCCTCGGGCGGAACGGCAGCTGCTGCGGACTTTGGCGCGTCGGCCGTT
CGTTTGCTTGTGAGAGTCACAATGCTCATGATGGTTGTGCTGCCCGTGAG
TATTTTTGCGTTATATTGCACACAATCGGGTCGATCAAATGATCCTGTGA
AAGATCTAAAACGGTTTGCTCGCAACGAAGCGATCAACAACAAAGTGCAG
CACATTGACGATCTCTCCGTTAGCGGCCTGAAGCTCTATGCACAGGCTAC
ATGTGTGAAGGGCCCTACAGTGACGGAGGTTAGAGAGGCTCTTCGCGCTC
AGCTTTATGAAATACCGAGCGCCGCTCGTGACCGTATCGTCGCAAGTGCC
GTCATTAGAGGAATCGATGCTGTAGGTACGGGACAGGATACGTCCTCCGA
TATAGAAGACTCTGGCACCGCGTTCAGTTACTTGGCCTATTGGAACACCA
AATACAACGGCGGTGAAGTGTTGCTTTCCGATAGATACTCTACTTGTGCC
ATGGTCGCTGGCGTGAACGTGAAGGCCGGGGAAGACATTGCGGGATACGA
AACCAGCACTTCCAAAGTTAAAATCGGGACGAAACCGTGCAAGTGTAGCA
TGTTGTGGTGCGTAGGTCGTTGTGACGAGTACGACACAGTGACCGCTCGG
AAACCCATATTCAAGCGCAACCGTTTATCGCTGAAGCAACAGGGCGAGCT
TCACAAGTGGATGGTCAAACAGGCCGTTGACCATGCGGAAAGCCTCGTTG
TGACCAGAAACGCTTTGAGTGAAAAGTGGAACGCTTTATTCCGTGGCGAT
GACGACGCTCCAGCGCTCACGTGGAAGGCACCGAATGCGGATTACAGCGG
AGATGATAGTGCTGGACGCAATTCAGAGCGTGCTCGCAACAGCGATTCAG
AATATGCAAAGCAGGAGCTTTGA
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protein sequence of Ggra10903.t1

>Ggra10903.t1 ID=Ggra10903.t1|Name=Ggra10903.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=391bp
MARVRATSTALDAESSSERRDLPPIAGSLYEASSHPVPMQKPSPPQPMAF
PHSYATANCSSAPRTHSGHLHAVPTPMPVVYQTPASGGTAAAADFGASAV
RLLVRVTMLMMVVLPVSIFALYCTQSGRSNDPVKDLKRFARNEAINNKVQ
HIDDLSVSGLKLYAQATCVKGPTVTEVREALRAQLYEIPSAARDRIVASA
VIRGIDAVGTGQDTSSDIEDSGTAFSYLAYWNTKYNGGEVLLSDRYSTCA
MVAGVNVKAGEDIAGYETSTSKVKIGTKPCKCSMLWCVGRCDEYDTVTAR
KPIFKRNRLSLKQQGELHKWMVKQAVDHAESLVVTRNALSEKWNALFRGD
DDAPALTWKAPNADYSGDDSAGRNSERARNSDSEYAKQEL*
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mRNA from alignment at tig00000098_pilon:92813..93985-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10903.t1 ID=Ggra10903.t1|Name=Ggra10903.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1173bp|location=Sequence derived from alignment at tig00000098_pilon:92813..93985- (Gracilaria gracilis GNS1m male)
ATGGCCCGTGTGAGGGCGACTTCAACCGCGCTCGACGCTGAGAGCTCTTC
GGAGCGGCGGGATTTACCGCCCATCGCCGGCAGCTTGTACGAGGCGTCAT
CGCACCCTGTCCCAATGCAGAAGCCGTCTCCACCACAGCCAATGGCGTTC
CCACATTCCTATGCTACCGCTAATTGCAGCAGCGCCCCACGCACGCATTC
GGGACATCTTCACGCCGTGCCCACTCCAATGCCCGTTGTGTACCAAACGC
CTGCCTCGGGCGGAACGGCAGCTGCTGCGGACTTTGGCGCGTCGGCCGTT
CGTTTGCTTGTGAGAGTCACAATGCTCATGATGGTTGTGCTGCCCGTGAG
TATTTTTGCGTTATATTGCACACAATCGGGTCGATCAAATGATCCTGTGA
AAGATCTAAAACGGTTTGCTCGCAACGAAGCGATCAACAACAAAGTGCAG
CACATTGACGATCTCTCCGTTAGCGGCCTGAAGCTCTATGCACAGGCTAC
ATGTGTGAAGGGCCCTACAGTGACGGAGGTTAGAGAGGCTCTTCGCGCTC
AGCTTTATGAAATACCGAGCGCCGCTCGTGACCGTATCGTCGCAAGTGCC
GTCATTAGAGGAATCGATGCTGTAGGTACGGGACAGGATACGTCCTCCGA
TATAGAAGACTCTGGCACCGCGTTCAGTTACTTGGCCTATTGGAACACCA
AATACAACGGCGGTGAAGTGTTGCTTTCCGATAGATACTCTACTTGTGCC
ATGGTCGCTGGCGTGAACGTGAAGGCCGGGGAAGACATTGCGGGATACGA
AACCAGCACTTCCAAAGTTAAAATCGGGACGAAACCGTGCAAGTGTAGCA
TGTTGTGGTGCGTAGGTCGTTGTGACGAGTACGACACAGTGACCGCTCGG
AAACCCATATTCAAGCGCAACCGTTTATCGCTGAAGCAACAGGGCGAGCT
TCACAAGTGGATGGTCAAACAGGCCGTTGACCATGCGGAAAGCCTCGTTG
TGACCAGAAACGCTTTGAGTGAAAAGTGGAACGCTTTATTCCGTGGCGAT
GACGACGCTCCAGCGCTCACGTGGAAGGCACCGAATGCGGATTACAGCGG
AGATGATAGTGCTGGACGCAATTCAGAGCGTGCTCGCAACAGCGATTCAG
AATATGCAAAGCAGGAGCTTTGA
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Coding sequence (CDS) from alignment at tig00000098_pilon:92813..93985-

>Ggra10903.t1 ID=Ggra10903.t1|Name=Ggra10903.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1173bp|location=Sequence derived from alignment at tig00000098_pilon:92813..93985- (Gracilaria gracilis GNS1m male)
ATGGCCCGTGTGAGGGCGACTTCAACCGCGCTCGACGCTGAGAGCTCTTC
GGAGCGGCGGGATTTACCGCCCATCGCCGGCAGCTTGTACGAGGCGTCAT
CGCACCCTGTCCCAATGCAGAAGCCGTCTCCACCACAGCCAATGGCGTTC
CCACATTCCTATGCTACCGCTAATTGCAGCAGCGCCCCACGCACGCATTC
GGGACATCTTCACGCCGTGCCCACTCCAATGCCCGTTGTGTACCAAACGC
CTGCCTCGGGCGGAACGGCAGCTGCTGCGGACTTTGGCGCGTCGGCCGTT
CGTTTGCTTGTGAGAGTCACAATGCTCATGATGGTTGTGCTGCCCGTGAG
TATTTTTGCGTTATATTGCACACAATCGGGTCGATCAAATGATCCTGTGA
AAGATCTAAAACGGTTTGCTCGCAACGAAGCGATCAACAACAAAGTGCAG
CACATTGACGATCTCTCCGTTAGCGGCCTGAAGCTCTATGCACAGGCTAC
ATGTGTGAAGGGCCCTACAGTGACGGAGGTTAGAGAGGCTCTTCGCGCTC
AGCTTTATGAAATACCGAGCGCCGCTCGTGACCGTATCGTCGCAAGTGCC
GTCATTAGAGGAATCGATGCTGTAGGTACGGGACAGGATACGTCCTCCGA
TATAGAAGACTCTGGCACCGCGTTCAGTTACTTGGCCTATTGGAACACCA
AATACAACGGCGGTGAAGTGTTGCTTTCCGATAGATACTCTACTTGTGCC
ATGGTCGCTGGCGTGAACGTGAAGGCCGGGGAAGACATTGCGGGATACGA
AACCAGCACTTCCAAAGTTAAAATCGGGACGAAACCGTGCAAGTGTAGCA
TGTTGTGGTGCGTAGGTCGTTGTGACGAGTACGACACAGTGACCGCTCGG
AAACCCATATTCAAGCGCAACCGTTTATCGCTGAAGCAACAGGGCGAGCT
TCACAAGTGGATGGTCAAACAGGCCGTTGACCATGCGGAAAGCCTCGTTG
TGACCAGAAACGCTTTGAGTGAAAAGTGGAACGCTTTATTCCGTGGCGAT
GACGACGCTCCAGCGCTCACGTGGAAGGCACCGAATGCGGATTACAGCGG
AGATGATAGTGCTGGACGCAATTCAGAGCGTGCTCGCAACAGCGATTCAG
AATATGCAAAGCAGGAGCTTTGA
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