Ggra10899.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10899.t1
Unique NameGgra10899.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length148
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000098_piloncontigtig00000098_pilon:83238..83681 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10899Ggra10899Gracilaria gracilis GNS1m malegenetig00000098_pilon 83238..83681 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10899.t1.start1Ggra10899.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000098_pilon 83238..83240 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10899.t1.CDS1Ggra10899.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000098_pilon 83238..83681 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10899.t1.exon1Ggra10899.t1.exon1Gracilaria gracilis GNS1m maleexontig00000098_pilon 83238..83681 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10899.t1.stop1Ggra10899.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000098_pilon 83679..83681 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10899.t1Ggra10899.t1Gracilaria gracilis GNS1m malepolypeptidetig00000098_pilon 83238..83681 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10899.t1 ID=Ggra10899.t1|Name=Ggra10899.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=148bp
MVAKRGRQTFIGGQGQDAYEIHGPVISDFVVVSIVRKKGEGIVVSAPNGT
WSAGILTIDVLSGESSEIVLIPDSAKIVDGSGNVLSNMGVVTCSNQNLIF
TPGNAFNSMERDRPTTVRISYASEESMVTIREPSAGNRLKFYAVADY*
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spliced messenger RNA

>Ggra10899.t1 ID=Ggra10899.t1|Name=Ggra10899.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=444bp|location=Sequence derived from alignment at tig00000098_pilon:83238..83681+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTAGCCAAGAGAGGCCGACAGACGTTCATTGGGGGACAGGGCCAAGA
CGCTTATGAAATACACGGGCCCGTCATCTCAGATTTCGTTGTTGTAAGCA
TCGTGAGGAAGAAAGGAGAAGGAATTGTTGTGTCTGCTCCCAATGGTACT
TGGTCCGCAGGAATACTAACCATTGACGTGCTATCCGGAGAAAGTTCAGA
GATCGTTCTCATTCCTGATTCGGCAAAAATTGTAGACGGTTCCGGCAATG
TACTCTCGAACATGGGTGTCGTGACTTGCAGCAACCAAAATTTGATTTTC
ACACCAGGCAATGCATTCAACAGTATGGAGCGTGATCGTCCAACAACAGT
GCGCATCAGTTATGCATCTGAAGAATCCATGGTCACAATAAGAGAGCCCT
CCGCTGGCAATAGACTCAAATTCTACGCCGTTGCAGACTATTag
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protein sequence of Ggra10899.t1

>Ggra10899.t1 ID=Ggra10899.t1|Name=Ggra10899.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=148bp
MVAKRGRQTFIGGQGQDAYEIHGPVISDFVVVSIVRKKGEGIVVSAPNGT
WSAGILTIDVLSGESSEIVLIPDSAKIVDGSGNVLSNMGVVTCSNQNLIF
TPGNAFNSMERDRPTTVRISYASEESMVTIREPSAGNRLKFYAVADY*
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mRNA from alignment at tig00000098_pilon:83238..83681+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10899.t1 ID=Ggra10899.t1|Name=Ggra10899.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=444bp|location=Sequence derived from alignment at tig00000098_pilon:83238..83681+ (Gracilaria gracilis GNS1m male)
ATGGTAGCCAAGAGAGGCCGACAGACGTTCATTGGGGGACAGGGCCAAGA
CGCTTATGAAATACACGGGCCCGTCATCTCAGATTTCGTTGTTGTAAGCA
TCGTGAGGAAGAAAGGAGAAGGAATTGTTGTGTCTGCTCCCAATGGTACT
TGGTCCGCAGGAATACTAACCATTGACGTGCTATCCGGAGAAAGTTCAGA
GATCGTTCTCATTCCTGATTCGGCAAAAATTGTAGACGGTTCCGGCAATG
TACTCTCGAACATGGGTGTCGTGACTTGCAGCAACCAAAATTTGATTTTC
ACACCAGGCAATGCATTCAACAGTATGGAGCGTGATCGTCCAACAACAGT
GCGCATCAGTTATGCATCTGAAGAATCCATGGTCACAATAAGAGAGCCCT
CCGCTGGCAATAGACTCAAATTCTACGCCGTTGCAGACTATTag
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Coding sequence (CDS) from alignment at tig00000098_pilon:83238..83681+

>Ggra10899.t1 ID=Ggra10899.t1|Name=Ggra10899.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=444bp|location=Sequence derived from alignment at tig00000098_pilon:83238..83681+ (Gracilaria gracilis GNS1m male)
ATGGTAGCCAAGAGAGGCCGACAGACGTTCATTGGGGGACAGGGCCAAGA
CGCTTATGAAATACACGGGCCCGTCATCTCAGATTTCGTTGTTGTAAGCA
TCGTGAGGAAGAAAGGAGAAGGAATTGTTGTGTCTGCTCCCAATGGTACT
TGGTCCGCAGGAATACTAACCATTGACGTGCTATCCGGAGAAAGTTCAGA
GATCGTTCTCATTCCTGATTCGGCAAAAATTGTAGACGGTTCCGGCAATG
TACTCTCGAACATGGGTGTCGTGACTTGCAGCAACCAAAATTTGATTTTC
ACACCAGGCAATGCATTCAACAGTATGGAGCGTGATCGTCCAACAACAGT
GCGCATCAGTTATGCATCTGAAGAATCCATGGTCACAATAAGAGAGCCCT
CCGCTGGCAATAGACTCAAATTCTACGCCGTTGCAGACTATTag
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