Ggra10898.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10898.t1
Unique NameGgra10898.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length143
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000098_piloncontigtig00000098_pilon:64041..64469 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10898Ggra10898Gracilaria gracilis GNS1m malegenetig00000098_pilon 64041..64469 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10898.t1.start1Ggra10898.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000098_pilon 64041..64043 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10898.t1.CDS1Ggra10898.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000098_pilon 64041..64469 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10898.t1.exon1Ggra10898.t1.exon1Gracilaria gracilis GNS1m maleexontig00000098_pilon 64041..64469 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10898.t1.stop1Ggra10898.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000098_pilon 64467..64469 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10898.t1Ggra10898.t1Gracilaria gracilis GNS1m malepolypeptidetig00000098_pilon 64041..64469 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10898.t1 ID=Ggra10898.t1|Name=Ggra10898.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=143bp
MTDTVRCITDDDTANDASRWCGPVLDLETEEVMDNRVATDGVLSSFANFI
ASTDAGNEAECQDTPGTSPGCSRKDTPVPLLSPLRAMDEVRTWLHHLAYG
TRYAYLTIRDTLAYASSTYVGCATASNTRCAAFPLRQIGNSP*
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spliced messenger RNA

>Ggra10898.t1 ID=Ggra10898.t1|Name=Ggra10898.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=429bp|location=Sequence derived from alignment at tig00000098_pilon:64041..64469+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACCGACACCGTACGCTGCATAACTGACGACGACACCGCAAACGACGC
ATCTCGCTGGTGCGGCCCCGTGCTGGACCTCGAGACCGAGGAGGTCATGG
ATAACAGGGTCGCAACCGACGGGGTCTTGTCCTCCTTCGCTAATTTCATA
GCCAGCACCGATGCCGGCAATGAGGCCGAGTGCCAGGACACCCCGGGCAC
CAGCCCGGGATGCAGCCGCAAAGATACGCCCGTGCCCCTTCTGTCGCCAC
TACGGGCGATGGATGAGGTGCGCACGTGGCTCCATCACCTGGCATATGGC
ACGCGCTACGCGTACCTGACCATACGCGATACGCTCGCCTACGCGTCTTC
TACGTACGTGGGATGCGCAACAGCATCGAATACGCGGTGCGCTGCATTCC
CCTTGCGACAGATCGGGAACAGTCCATGA
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protein sequence of Ggra10898.t1

>Ggra10898.t1 ID=Ggra10898.t1|Name=Ggra10898.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=143bp
MTDTVRCITDDDTANDASRWCGPVLDLETEEVMDNRVATDGVLSSFANFI
ASTDAGNEAECQDTPGTSPGCSRKDTPVPLLSPLRAMDEVRTWLHHLAYG
TRYAYLTIRDTLAYASSTYVGCATASNTRCAAFPLRQIGNSP*
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mRNA from alignment at tig00000098_pilon:64041..64469+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10898.t1 ID=Ggra10898.t1|Name=Ggra10898.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=429bp|location=Sequence derived from alignment at tig00000098_pilon:64041..64469+ (Gracilaria gracilis GNS1m male)
ATGACCGACACCGTACGCTGCATAACTGACGACGACACCGCAAACGACGC
ATCTCGCTGGTGCGGCCCCGTGCTGGACCTCGAGACCGAGGAGGTCATGG
ATAACAGGGTCGCAACCGACGGGGTCTTGTCCTCCTTCGCTAATTTCATA
GCCAGCACCGATGCCGGCAATGAGGCCGAGTGCCAGGACACCCCGGGCAC
CAGCCCGGGATGCAGCCGCAAAGATACGCCCGTGCCCCTTCTGTCGCCAC
TACGGGCGATGGATGAGGTGCGCACGTGGCTCCATCACCTGGCATATGGC
ACGCGCTACGCGTACCTGACCATACGCGATACGCTCGCCTACGCGTCTTC
TACGTACGTGGGATGCGCAACAGCATCGAATACGCGGTGCGCTGCATTCC
CCTTGCGACAGATCGGGAACAGTCCATGA
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Coding sequence (CDS) from alignment at tig00000098_pilon:64041..64469+

>Ggra10898.t1 ID=Ggra10898.t1|Name=Ggra10898.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=429bp|location=Sequence derived from alignment at tig00000098_pilon:64041..64469+ (Gracilaria gracilis GNS1m male)
ATGACCGACACCGTACGCTGCATAACTGACGACGACACCGCAAACGACGC
ATCTCGCTGGTGCGGCCCCGTGCTGGACCTCGAGACCGAGGAGGTCATGG
ATAACAGGGTCGCAACCGACGGGGTCTTGTCCTCCTTCGCTAATTTCATA
GCCAGCACCGATGCCGGCAATGAGGCCGAGTGCCAGGACACCCCGGGCAC
CAGCCCGGGATGCAGCCGCAAAGATACGCCCGTGCCCCTTCTGTCGCCAC
TACGGGCGATGGATGAGGTGCGCACGTGGCTCCATCACCTGGCATATGGC
ACGCGCTACGCGTACCTGACCATACGCGATACGCTCGCCTACGCGTCTTC
TACGTACGTGGGATGCGCAACAGCATCGAATACGCGGTGCGCTGCATTCC
CCTTGCGACAGATCGGGAACAGTCCATGA
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