Ggra10892.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10892.t1
Unique NameGgra10892.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length757
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000098_piloncontigtig00000098_pilon:11537..13807 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10892Ggra10892Gracilaria gracilis GNS1m malegenetig00000098_pilon 11537..13807 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10892.t1.stop1Ggra10892.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000098_pilon 11537..11539 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10892.t1.CDS1Ggra10892.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000098_pilon 11537..13807 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10892.t1.exon1Ggra10892.t1.exon1Gracilaria gracilis GNS1m maleexontig00000098_pilon 11537..13807 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10892.t1.start1Ggra10892.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000098_pilon 13805..13807 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10892.t1Ggra10892.t1Gracilaria gracilis GNS1m malepolypeptidetig00000098_pilon 11537..13807 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10892.t1 ID=Ggra10892.t1|Name=Ggra10892.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=757bp
MDCDYKFTDSTGSEVDGKGRGRKKSGKKATLTLLKGPPPGWESYIDWTQP
GTAARVNELEGRVNEEAEEEDGEDAEEIVLKKEKFEVMKIVRDRVKEVMK
KGGTKKTFDLGEIVEIAIAQYKKNRAKEIAVKVKGGVSGNRFELFQEDHK
RITTFNMASDSAVMFTIQYLSNWHTDCLPDVYLMDSLMLEGWFGTVLHEG
KEPLETLKRRTKSVAGRTLLWHQRTWFSRITLLPMVGANHWTLAVVVNFP
SVLQEMEQVRRTKAPPTEKKAAVFWIDSMEKGSPQEGMRDNIFHYLVAAY
PGTRKLTVTQLKERVSFYPVKKDVQNGLECGFYVAYHVSIVSKNHRLFLE
GDYAAVQLYMTAMYKSYTFKGYRKDVQTRLQSLKEMYERNGERYVESSPF
YWTGRDPKCVSIRKRPELVLNTASGPVAEQSKNFTEVPVPRKEATTTSKC
EEGSRTRVGDTKGSKEKEKKEGENEDEDFMERPPKRSKLNQSSELWMAGR
DAKAEWDGDQLRRAEGEPCPFPTEANQSVPDGREEPQVPGETGSVVPDER
TEPTLSADARTGKHPSDLKEHAVWSEEPEGSARSNPQGESYGPLPQALTG
VLHGLLAMDGNGSPETKKKVISKVMRDSKIVDKMQTLGQECSIDKGMGIM
TPVVISKYREVVGSTRAGIDGEDLCRTRETIGVQQGVRSPSSPGIEANDR
HLSSTECSKKGGYAAMMEEAQSLLEVVSDTAIKKEWKTCMAKVEELVRKM
KSPKSK*
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spliced messenger RNA

>Ggra10892.t1 ID=Ggra10892.t1|Name=Ggra10892.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2271bp|location=Sequence derived from alignment at tig00000098_pilon:11537..13807- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACTGCGATTATAAGTTCACAGATAGTACTGGAAGCGAGGTGGACGG
GAAGGGAAGGGGACGCAAGAAATCTGGGAAGAAGGCGACGCTCACATTAT
TGAAGGGCCCACCCCCGGGTTGGGAGTCATATATAGACTGGACACAGCCT
GGGACTGCAGCACGTGTCAATGAGCTGGAAGGTCGCGTAAATGAGGAGGC
GGAAGAGGAGGATGGAGAAGATGCCGAGGAGATAGTGTTAAAGAAGGAGA
AGTTTGAGGTAATGAAGATAGTCCGCGATAGGGTGAAGGAAGTTATGAAG
AAAGGTGGAACTAAGAAAACCTTCGACTTGGGAGAGATAGTAGAGATCGC
AATTGCTCAATACAAGAAGAATCGCGCCAAAGAAATTGCCGTAAAGGTGA
AGGGAGGGGTATCCGGTAACCGGTTTGAGTTGTTCCAAGAAGATCATAAG
CGAATTACAACGTTTAACATGGCATCGGATAGTGCAGTGATGTTCACCAT
CCAGTATCTGTCGAATTGGCACACTGATTGTTTACCCGATGTTTACCTCA
TGGACTCACTTATGTTGGAGGGTTGGTTTGGAACGGTTCTGCACGAAGGC
AAGGAACCATTGGAAACGCTCAAGAGAAGGACAAAATCTGTTGCTGGTAG
GACTTTATTATGGCATCAACGAACATGGTTTTCACGTATTACGTTGTTAC
CTATGGTGGGGGCAAACCATTGGACTCTGGCTGTGGTTGTGAATTTCCCC
AGTGTTCTGCAGGAAATGGAGCAGGTGAGGAGGACCAAAGCCCCACCGAC
GGAGAAGAAAGCTGCTGTGTTTTGGATTGATAGCATGGAGAAAGGGTCAC
CGCAAGAGGGAATGAGGGACAATATATTCCATTACCTCGTGGCGGCATAT
CCTGGAACTCGGAAACTTACTGTTACGCAATTGAAAGAAAGAGTATCCTT
TTACCCTGTCAAGAAGGATGTACAGAACGGATTGGAATGTGGTTTTTACG
TGGCATATCATGTTTCCATAGTGTCAAAGAACCATCGTTTGTTTCTTGAA
GGAGACTATGCTGCTGTGCAATTGTACATGACAGCCATGTACAAGTCATA
TACCTTTAAAGGGTATAGGAAAGATGTGCAAACACGGCTGCAGTCCCTGA
AGGAAATGTACGAGCGTAACGGGGAGAGGTACGTAGAAAGTTCTCCTTTC
TACTGGACGGGGAGAGATCCAAAGTGTGTGTCGATTAGGAAAAGACCTGA
ACTCGTCTTGAACACTGCTAGCGGCCCAGTTGCAGAGCAGAGCAAGAATT
TCACTGAAGTGCCGGTACCACGCAAAGAAGCAACCACCACGTCCAAGTGC
GAGGAGGGCAGCCGTACCAGAGTCGGAGATACGAAGGGGAGTAAAGAGAA
AGAGAAAAAGGAGGGGGAGAACGAAGATGAAGATTTCATGGAGCGACCCC
CGAAGCGATCGAAGCTGAACCAAAGTTCAGAATTGTGGATGGCGGGAAGA
GATGCGAAGGCTGAATGGGATGGAGACCAGTTAAGACGTGCCGAAGGGGA
GCCGTGTCCATTTCCTACGGAGGCTAATCAGTCTGTGCCTGACGGAAGGG
AAGAACCTCAGGTCCCAGGTGAAACCGGGTCGGTGGTACCAGACGAACGC
ACGGAGCCGACACTCTCAGCTGATGCGCGAACCGGAAAGCATCCATCGGA
TCTGAAGGAGCATGCGGTGTGGAGCGAAGAACCCGAAGGTAGCGCGCGTA
GTAACCCCCAAGGCGAATCCTATGGACCTCTCCCGCAGGCTCTCACTGGG
GTGCTACATGGGTTACTGGCAATGGATGGTAATGGATCGCCAGAAACGAA
AAAGAAGGTGATATCAAAGGTAATGAGGGACTCGAAGATCGTGGATAAAA
TGCAGACGTTGGGGCAGGAGTGTTCCATAGATAAAGGAATGGGAATAATG
ACGCCCGTCGTGATATCAAAATATCGAGAGGTGGTGGGAAGCACGCGCGC
CGGAATTGACGGCGAAGATTTGTGTCGCACACGGGAAACGATAGGAGTCC
AACAAGGTGTACGAAGCCCTTCATCGCCAGGAATTGAGGCAAATGATAGA
CATTTAAGCAGTACGGAGTGTTCAAAGAAGGGTGGTTATGCGGCCATGAT
GGAAGAAGCGCAGTCGCTATTGGAAGTTGTTTCTGACACAGCAATTAAGA
AGGAATGGAAGACGTGTATGGCCAAGGTCGAGGAACTTGTGCGAAAAATG
AAATCCCCCAAATCCAAGTAA
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protein sequence of Ggra10892.t1

>Ggra10892.t1 ID=Ggra10892.t1|Name=Ggra10892.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=757bp
MDCDYKFTDSTGSEVDGKGRGRKKSGKKATLTLLKGPPPGWESYIDWTQP
GTAARVNELEGRVNEEAEEEDGEDAEEIVLKKEKFEVMKIVRDRVKEVMK
KGGTKKTFDLGEIVEIAIAQYKKNRAKEIAVKVKGGVSGNRFELFQEDHK
RITTFNMASDSAVMFTIQYLSNWHTDCLPDVYLMDSLMLEGWFGTVLHEG
KEPLETLKRRTKSVAGRTLLWHQRTWFSRITLLPMVGANHWTLAVVVNFP
SVLQEMEQVRRTKAPPTEKKAAVFWIDSMEKGSPQEGMRDNIFHYLVAAY
PGTRKLTVTQLKERVSFYPVKKDVQNGLECGFYVAYHVSIVSKNHRLFLE
GDYAAVQLYMTAMYKSYTFKGYRKDVQTRLQSLKEMYERNGERYVESSPF
YWTGRDPKCVSIRKRPELVLNTASGPVAEQSKNFTEVPVPRKEATTTSKC
EEGSRTRVGDTKGSKEKEKKEGENEDEDFMERPPKRSKLNQSSELWMAGR
DAKAEWDGDQLRRAEGEPCPFPTEANQSVPDGREEPQVPGETGSVVPDER
TEPTLSADARTGKHPSDLKEHAVWSEEPEGSARSNPQGESYGPLPQALTG
VLHGLLAMDGNGSPETKKKVISKVMRDSKIVDKMQTLGQECSIDKGMGIM
TPVVISKYREVVGSTRAGIDGEDLCRTRETIGVQQGVRSPSSPGIEANDR
HLSSTECSKKGGYAAMMEEAQSLLEVVSDTAIKKEWKTCMAKVEELVRKM
KSPKSK*
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mRNA from alignment at tig00000098_pilon:11537..13807-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10892.t1 ID=Ggra10892.t1|Name=Ggra10892.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2271bp|location=Sequence derived from alignment at tig00000098_pilon:11537..13807- (Gracilaria gracilis GNS1m male)
ATGGACTGCGATTATAAGTTCACAGATAGTACTGGAAGCGAGGTGGACGG
GAAGGGAAGGGGACGCAAGAAATCTGGGAAGAAGGCGACGCTCACATTAT
TGAAGGGCCCACCCCCGGGTTGGGAGTCATATATAGACTGGACACAGCCT
GGGACTGCAGCACGTGTCAATGAGCTGGAAGGTCGCGTAAATGAGGAGGC
GGAAGAGGAGGATGGAGAAGATGCCGAGGAGATAGTGTTAAAGAAGGAGA
AGTTTGAGGTAATGAAGATAGTCCGCGATAGGGTGAAGGAAGTTATGAAG
AAAGGTGGAACTAAGAAAACCTTCGACTTGGGAGAGATAGTAGAGATCGC
AATTGCTCAATACAAGAAGAATCGCGCCAAAGAAATTGCCGTAAAGGTGA
AGGGAGGGGTATCCGGTAACCGGTTTGAGTTGTTCCAAGAAGATCATAAG
CGAATTACAACGTTTAACATGGCATCGGATAGTGCAGTGATGTTCACCAT
CCAGTATCTGTCGAATTGGCACACTGATTGTTTACCCGATGTTTACCTCA
TGGACTCACTTATGTTGGAGGGTTGGTTTGGAACGGTTCTGCACGAAGGC
AAGGAACCATTGGAAACGCTCAAGAGAAGGACAAAATCTGTTGCTGGTAG
GACTTTATTATGGCATCAACGAACATGGTTTTCACGTATTACGTTGTTAC
CTATGGTGGGGGCAAACCATTGGACTCTGGCTGTGGTTGTGAATTTCCCC
AGTGTTCTGCAGGAAATGGAGCAGGTGAGGAGGACCAAAGCCCCACCGAC
GGAGAAGAAAGCTGCTGTGTTTTGGATTGATAGCATGGAGAAAGGGTCAC
CGCAAGAGGGAATGAGGGACAATATATTCCATTACCTCGTGGCGGCATAT
CCTGGAACTCGGAAACTTACTGTTACGCAATTGAAAGAAAGAGTATCCTT
TTACCCTGTCAAGAAGGATGTACAGAACGGATTGGAATGTGGTTTTTACG
TGGCATATCATGTTTCCATAGTGTCAAAGAACCATCGTTTGTTTCTTGAA
GGAGACTATGCTGCTGTGCAATTGTACATGACAGCCATGTACAAGTCATA
TACCTTTAAAGGGTATAGGAAAGATGTGCAAACACGGCTGCAGTCCCTGA
AGGAAATGTACGAGCGTAACGGGGAGAGGTACGTAGAAAGTTCTCCTTTC
TACTGGACGGGGAGAGATCCAAAGTGTGTGTCGATTAGGAAAAGACCTGA
ACTCGTCTTGAACACTGCTAGCGGCCCAGTTGCAGAGCAGAGCAAGAATT
TCACTGAAGTGCCGGTACCACGCAAAGAAGCAACCACCACGTCCAAGTGC
GAGGAGGGCAGCCGTACCAGAGTCGGAGATACGAAGGGGAGTAAAGAGAA
AGAGAAAAAGGAGGGGGAGAACGAAGATGAAGATTTCATGGAGCGACCCC
CGAAGCGATCGAAGCTGAACCAAAGTTCAGAATTGTGGATGGCGGGAAGA
GATGCGAAGGCTGAATGGGATGGAGACCAGTTAAGACGTGCCGAAGGGGA
GCCGTGTCCATTTCCTACGGAGGCTAATCAGTCTGTGCCTGACGGAAGGG
AAGAACCTCAGGTCCCAGGTGAAACCGGGTCGGTGGTACCAGACGAACGC
ACGGAGCCGACACTCTCAGCTGATGCGCGAACCGGAAAGCATCCATCGGA
TCTGAAGGAGCATGCGGTGTGGAGCGAAGAACCCGAAGGTAGCGCGCGTA
GTAACCCCCAAGGCGAATCCTATGGACCTCTCCCGCAGGCTCTCACTGGG
GTGCTACATGGGTTACTGGCAATGGATGGTAATGGATCGCCAGAAACGAA
AAAGAAGGTGATATCAAAGGTAATGAGGGACTCGAAGATCGTGGATAAAA
TGCAGACGTTGGGGCAGGAGTGTTCCATAGATAAAGGAATGGGAATAATG
ACGCCCGTCGTGATATCAAAATATCGAGAGGTGGTGGGAAGCACGCGCGC
CGGAATTGACGGCGAAGATTTGTGTCGCACACGGGAAACGATAGGAGTCC
AACAAGGTGTACGAAGCCCTTCATCGCCAGGAATTGAGGCAAATGATAGA
CATTTAAGCAGTACGGAGTGTTCAAAGAAGGGTGGTTATGCGGCCATGAT
GGAAGAAGCGCAGTCGCTATTGGAAGTTGTTTCTGACACAGCAATTAAGA
AGGAATGGAAGACGTGTATGGCCAAGGTCGAGGAACTTGTGCGAAAAATG
AAATCCCCCAAATCCAAGTAA
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Coding sequence (CDS) from alignment at tig00000098_pilon:11537..13807-

>Ggra10892.t1 ID=Ggra10892.t1|Name=Ggra10892.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2271bp|location=Sequence derived from alignment at tig00000098_pilon:11537..13807- (Gracilaria gracilis GNS1m male)
ATGGACTGCGATTATAAGTTCACAGATAGTACTGGAAGCGAGGTGGACGG
GAAGGGAAGGGGACGCAAGAAATCTGGGAAGAAGGCGACGCTCACATTAT
TGAAGGGCCCACCCCCGGGTTGGGAGTCATATATAGACTGGACACAGCCT
GGGACTGCAGCACGTGTCAATGAGCTGGAAGGTCGCGTAAATGAGGAGGC
GGAAGAGGAGGATGGAGAAGATGCCGAGGAGATAGTGTTAAAGAAGGAGA
AGTTTGAGGTAATGAAGATAGTCCGCGATAGGGTGAAGGAAGTTATGAAG
AAAGGTGGAACTAAGAAAACCTTCGACTTGGGAGAGATAGTAGAGATCGC
AATTGCTCAATACAAGAAGAATCGCGCCAAAGAAATTGCCGTAAAGGTGA
AGGGAGGGGTATCCGGTAACCGGTTTGAGTTGTTCCAAGAAGATCATAAG
CGAATTACAACGTTTAACATGGCATCGGATAGTGCAGTGATGTTCACCAT
CCAGTATCTGTCGAATTGGCACACTGATTGTTTACCCGATGTTTACCTCA
TGGACTCACTTATGTTGGAGGGTTGGTTTGGAACGGTTCTGCACGAAGGC
AAGGAACCATTGGAAACGCTCAAGAGAAGGACAAAATCTGTTGCTGGTAG
GACTTTATTATGGCATCAACGAACATGGTTTTCACGTATTACGTTGTTAC
CTATGGTGGGGGCAAACCATTGGACTCTGGCTGTGGTTGTGAATTTCCCC
AGTGTTCTGCAGGAAATGGAGCAGGTGAGGAGGACCAAAGCCCCACCGAC
GGAGAAGAAAGCTGCTGTGTTTTGGATTGATAGCATGGAGAAAGGGTCAC
CGCAAGAGGGAATGAGGGACAATATATTCCATTACCTCGTGGCGGCATAT
CCTGGAACTCGGAAACTTACTGTTACGCAATTGAAAGAAAGAGTATCCTT
TTACCCTGTCAAGAAGGATGTACAGAACGGATTGGAATGTGGTTTTTACG
TGGCATATCATGTTTCCATAGTGTCAAAGAACCATCGTTTGTTTCTTGAA
GGAGACTATGCTGCTGTGCAATTGTACATGACAGCCATGTACAAGTCATA
TACCTTTAAAGGGTATAGGAAAGATGTGCAAACACGGCTGCAGTCCCTGA
AGGAAATGTACGAGCGTAACGGGGAGAGGTACGTAGAAAGTTCTCCTTTC
TACTGGACGGGGAGAGATCCAAAGTGTGTGTCGATTAGGAAAAGACCTGA
ACTCGTCTTGAACACTGCTAGCGGCCCAGTTGCAGAGCAGAGCAAGAATT
TCACTGAAGTGCCGGTACCACGCAAAGAAGCAACCACCACGTCCAAGTGC
GAGGAGGGCAGCCGTACCAGAGTCGGAGATACGAAGGGGAGTAAAGAGAA
AGAGAAAAAGGAGGGGGAGAACGAAGATGAAGATTTCATGGAGCGACCCC
CGAAGCGATCGAAGCTGAACCAAAGTTCAGAATTGTGGATGGCGGGAAGA
GATGCGAAGGCTGAATGGGATGGAGACCAGTTAAGACGTGCCGAAGGGGA
GCCGTGTCCATTTCCTACGGAGGCTAATCAGTCTGTGCCTGACGGAAGGG
AAGAACCTCAGGTCCCAGGTGAAACCGGGTCGGTGGTACCAGACGAACGC
ACGGAGCCGACACTCTCAGCTGATGCGCGAACCGGAAAGCATCCATCGGA
TCTGAAGGAGCATGCGGTGTGGAGCGAAGAACCCGAAGGTAGCGCGCGTA
GTAACCCCCAAGGCGAATCCTATGGACCTCTCCCGCAGGCTCTCACTGGG
GTGCTACATGGGTTACTGGCAATGGATGGTAATGGATCGCCAGAAACGAA
AAAGAAGGTGATATCAAAGGTAATGAGGGACTCGAAGATCGTGGATAAAA
TGCAGACGTTGGGGCAGGAGTGTTCCATAGATAAAGGAATGGGAATAATG
ACGCCCGTCGTGATATCAAAATATCGAGAGGTGGTGGGAAGCACGCGCGC
CGGAATTGACGGCGAAGATTTGTGTCGCACACGGGAAACGATAGGAGTCC
AACAAGGTGTACGAAGCCCTTCATCGCCAGGAATTGAGGCAAATGATAGA
CATTTAAGCAGTACGGAGTGTTCAAAGAAGGGTGGTTATGCGGCCATGAT
GGAAGAAGCGCAGTCGCTATTGGAAGTTGTTTCTGACACAGCAATTAAGA
AGGAATGGAAGACGTGTATGGCCAAGGTCGAGGAACTTGTGCGAAAAATG
AAATCCCCCAAATCCAAGTAA
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