Ggra10886.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10886.t1
Unique NameGgra10886.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length150
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000125_piloncontigtig00000125_pilon:395090..395539 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10886Ggra10886Gracilaria gracilis GNS1m malegenetig00000125_pilon 395090..395539 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10886.t1.start1Ggra10886.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000125_pilon 395090..395092 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10886.t1.CDS1Ggra10886.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000125_pilon 395090..395539 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10886.t1.exon1Ggra10886.t1.exon1Gracilaria gracilis GNS1m maleexontig00000125_pilon 395090..395539 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10886.t1.stop1Ggra10886.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000125_pilon 395537..395539 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10886.t1Ggra10886.t1Gracilaria gracilis GNS1m malepolypeptidetig00000125_pilon 395090..395539 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10886.t1 ID=Ggra10886.t1|Name=Ggra10886.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=150bp
MCTEPDRQQPSLPHTFDDSHFLQQNIQQLRQHLNPPDPTVHHTHGTLSLP
YHPLVLIPYVPNGRFRFASSLIHSTLSAPLLLTALWSRPPLPTALSSSLL
PPALPTALSSSLLPPALPTALSSSLLPPALPLFSQRTRLGRCEQNTFID*
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spliced messenger RNA

>Ggra10886.t1 ID=Ggra10886.t1|Name=Ggra10886.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=450bp|location=Sequence derived from alignment at tig00000125_pilon:395090..395539+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGTACCGAACCCGATCGGCAGCAACCGTCGCTACCACACACCTTTGA
CGACTCGCACTTCCTGCAACAGAACATCCAACAGCTAAGACAGCACCTGA
ACCCACCCGACCCCACGGTGCACCACACGCACGGCACCCTATCGCTGCCG
TACCACCCGTTGGTCCTCATACCATACGTTCCTAACGGTCGCTTCCGTTT
CGCCTCCTCGCTCATACATTCCACGTTGAGCGCACCGCTGCTGCTCACTG
CTTTGTGGTCGCGACCGCCGCTGCCCACCGCATTGTCGTCGTCGCTACTG
CCGCCCGCGCTGCCCACCGCATTGTCGTCGTCACTACTGCCGCCCGCGCT
TCCCACCGCATTGTCGTCGTCGTTACTGCCGCCCGCGCTGCCGCTTTTCT
CGCAACGTACTAGGCTAGGTAGGTGTGAGCAAAATACATTTATTGACTGA
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protein sequence of Ggra10886.t1

>Ggra10886.t1 ID=Ggra10886.t1|Name=Ggra10886.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=150bp
MCTEPDRQQPSLPHTFDDSHFLQQNIQQLRQHLNPPDPTVHHTHGTLSLP
YHPLVLIPYVPNGRFRFASSLIHSTLSAPLLLTALWSRPPLPTALSSSLL
PPALPTALSSSLLPPALPTALSSSLLPPALPLFSQRTRLGRCEQNTFID*
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mRNA from alignment at tig00000125_pilon:395090..395539+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10886.t1 ID=Ggra10886.t1|Name=Ggra10886.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=450bp|location=Sequence derived from alignment at tig00000125_pilon:395090..395539+ (Gracilaria gracilis GNS1m male)
ATGTGTACCGAACCCGATCGGCAGCAACCGTCGCTACCACACACCTTTGA
CGACTCGCACTTCCTGCAACAGAACATCCAACAGCTAAGACAGCACCTGA
ACCCACCCGACCCCACGGTGCACCACACGCACGGCACCCTATCGCTGCCG
TACCACCCGTTGGTCCTCATACCATACGTTCCTAACGGTCGCTTCCGTTT
CGCCTCCTCGCTCATACATTCCACGTTGAGCGCACCGCTGCTGCTCACTG
CTTTGTGGTCGCGACCGCCGCTGCCCACCGCATTGTCGTCGTCGCTACTG
CCGCCCGCGCTGCCCACCGCATTGTCGTCGTCACTACTGCCGCCCGCGCT
TCCCACCGCATTGTCGTCGTCGTTACTGCCGCCCGCGCTGCCGCTTTTCT
CGCAACGTACTAGGCTAGGTAGGTGTGAGCAAAATACATTTATTGACTGA
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Coding sequence (CDS) from alignment at tig00000125_pilon:395090..395539+

>Ggra10886.t1 ID=Ggra10886.t1|Name=Ggra10886.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=450bp|location=Sequence derived from alignment at tig00000125_pilon:395090..395539+ (Gracilaria gracilis GNS1m male)
ATGTGTACCGAACCCGATCGGCAGCAACCGTCGCTACCACACACCTTTGA
CGACTCGCACTTCCTGCAACAGAACATCCAACAGCTAAGACAGCACCTGA
ACCCACCCGACCCCACGGTGCACCACACGCACGGCACCCTATCGCTGCCG
TACCACCCGTTGGTCCTCATACCATACGTTCCTAACGGTCGCTTCCGTTT
CGCCTCCTCGCTCATACATTCCACGTTGAGCGCACCGCTGCTGCTCACTG
CTTTGTGGTCGCGACCGCCGCTGCCCACCGCATTGTCGTCGTCGCTACTG
CCGCCCGCGCTGCCCACCGCATTGTCGTCGTCACTACTGCCGCCCGCGCT
TCCCACCGCATTGTCGTCGTCGTTACTGCCGCCCGCGCTGCCGCTTTTCT
CGCAACGTACTAGGCTAGGTAGGTGTGAGCAAAATACATTTATTGACTGA
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