Ggra10803.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10803.t1
Unique NameGgra10803.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length207
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000198_piloncontigtig00000198_pilon:57975..58595 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10803Ggra10803Gracilaria gracilis GNS1m malegenetig00000198_pilon 57975..58595 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10803.t1.stop1Ggra10803.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000198_pilon 57975..57977 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10803.t1.CDS1Ggra10803.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000198_pilon 57975..58595 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10803.t1.exon1Ggra10803.t1.exon1Gracilaria gracilis GNS1m maleexontig00000198_pilon 57975..58595 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10803.t1.start1Ggra10803.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000198_pilon 58593..58595 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10803.t1Ggra10803.t1Gracilaria gracilis GNS1m malepolypeptidetig00000198_pilon 57975..58595 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10803.t1 ID=Ggra10803.t1|Name=Ggra10803.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=207bp
MKLLICFFAIALSAATISTFAQPITLERKQYVTYAWCEVNAADHCEFAYE
GLHGYYDHVQYGTGNYSMSGPSNGAFTPRIIQKEPSYYDSAVGYVKSDDA
LRDVYACEPEYFNNGNYYETRCRYLNVPGTLYDAKRLPGVRGSGISRIHG
AAMRRYVPNGACVLMYLTEYEILDTSVTPPRVRETVKMSPRQARIENKCV
QFYTQY*
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spliced messenger RNA

>Ggra10803.t1 ID=Ggra10803.t1|Name=Ggra10803.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=621bp|location=Sequence derived from alignment at tig00000198_pilon:57975..58595- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAACTTCTCATCTGCTTCTTTGCTATCGCCTTGTCTGCCGCGACGAT
TTCAACGTTCGCACAGCCCATTACTCTCGAACGGAAACAGTATGTGACCT
ACGCCTGGTGTGAAGTAAACGCTGCCGATCACTGTGAGTTTGCTTATGAG
GGCCTCCACGGCTATTACGACCATGTGCAGTATGGCACTGGTAATTACTC
TATGAGTGGTCCGAGTAATGGAGCTTTTACACCACGGATTATTCAGAAGG
AACCATCTTACTACGACTCTGCGGTCGGCTATGTGAAGTCTGACGATGCA
CTGCGAGACGTCTATGCATGCGAGCCGGAGTACTTCAACAATGGTAATTA
CTATGAGACCCGATGCAGGTATCTGAATGTTCCTGGAACTCTGTATGACG
CTAAAAGGCTTCCTGGAGTCCGTGGATCCGGTATTTCGCGTATTCATGGT
GCGGCTATGCGGAGATATGTTCCGAATGGGGCTTGTGTGCTGATGTATTT
GACCGAGTACGAGATTCTGGATACTTCTGTCACTCCTCCTCGAGTGAGAG
AGACTGTGAAGATGTCGCCTCGACAAGCCCGTATTGAGAACAAATGCGTT
CAGTTCTATACGCAGTACTAG
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protein sequence of Ggra10803.t1

>Ggra10803.t1 ID=Ggra10803.t1|Name=Ggra10803.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=207bp
MKLLICFFAIALSAATISTFAQPITLERKQYVTYAWCEVNAADHCEFAYE
GLHGYYDHVQYGTGNYSMSGPSNGAFTPRIIQKEPSYYDSAVGYVKSDDA
LRDVYACEPEYFNNGNYYETRCRYLNVPGTLYDAKRLPGVRGSGISRIHG
AAMRRYVPNGACVLMYLTEYEILDTSVTPPRVRETVKMSPRQARIENKCV
QFYTQY*
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mRNA from alignment at tig00000198_pilon:57975..58595-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10803.t1 ID=Ggra10803.t1|Name=Ggra10803.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=621bp|location=Sequence derived from alignment at tig00000198_pilon:57975..58595- (Gracilaria gracilis GNS1m male)
ATGAAACTTCTCATCTGCTTCTTTGCTATCGCCTTGTCTGCCGCGACGAT
TTCAACGTTCGCACAGCCCATTACTCTCGAACGGAAACAGTATGTGACCT
ACGCCTGGTGTGAAGTAAACGCTGCCGATCACTGTGAGTTTGCTTATGAG
GGCCTCCACGGCTATTACGACCATGTGCAGTATGGCACTGGTAATTACTC
TATGAGTGGTCCGAGTAATGGAGCTTTTACACCACGGATTATTCAGAAGG
AACCATCTTACTACGACTCTGCGGTCGGCTATGTGAAGTCTGACGATGCA
CTGCGAGACGTCTATGCATGCGAGCCGGAGTACTTCAACAATGGTAATTA
CTATGAGACCCGATGCAGGTATCTGAATGTTCCTGGAACTCTGTATGACG
CTAAAAGGCTTCCTGGAGTCCGTGGATCCGGTATTTCGCGTATTCATGGT
GCGGCTATGCGGAGATATGTTCCGAATGGGGCTTGTGTGCTGATGTATTT
GACCGAGTACGAGATTCTGGATACTTCTGTCACTCCTCCTCGAGTGAGAG
AGACTGTGAAGATGTCGCCTCGACAAGCCCGTATTGAGAACAAATGCGTT
CAGTTCTATACGCAGTACTAG
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Coding sequence (CDS) from alignment at tig00000198_pilon:57975..58595-

>Ggra10803.t1 ID=Ggra10803.t1|Name=Ggra10803.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=621bp|location=Sequence derived from alignment at tig00000198_pilon:57975..58595- (Gracilaria gracilis GNS1m male)
ATGAAACTTCTCATCTGCTTCTTTGCTATCGCCTTGTCTGCCGCGACGAT
TTCAACGTTCGCACAGCCCATTACTCTCGAACGGAAACAGTATGTGACCT
ACGCCTGGTGTGAAGTAAACGCTGCCGATCACTGTGAGTTTGCTTATGAG
GGCCTCCACGGCTATTACGACCATGTGCAGTATGGCACTGGTAATTACTC
TATGAGTGGTCCGAGTAATGGAGCTTTTACACCACGGATTATTCAGAAGG
AACCATCTTACTACGACTCTGCGGTCGGCTATGTGAAGTCTGACGATGCA
CTGCGAGACGTCTATGCATGCGAGCCGGAGTACTTCAACAATGGTAATTA
CTATGAGACCCGATGCAGGTATCTGAATGTTCCTGGAACTCTGTATGACG
CTAAAAGGCTTCCTGGAGTCCGTGGATCCGGTATTTCGCGTATTCATGGT
GCGGCTATGCGGAGATATGTTCCGAATGGGGCTTGTGTGCTGATGTATTT
GACCGAGTACGAGATTCTGGATACTTCTGTCACTCCTCCTCGAGTGAGAG
AGACTGTGAAGATGTCGCCTCGACAAGCCCGTATTGAGAACAAATGCGTT
CAGTTCTATACGCAGTACTAG
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