Ggra10792.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10792.t1
Unique NameGgra10792.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length329
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000225_piloncontigtig00000225_pilon:91677..92663 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10792Ggra10792Gracilaria gracilis GNS1m malegenetig00000225_pilon 91677..92663 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10792.t1.stop1Ggra10792.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000225_pilon 91677..91679 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10792.t1.CDS1Ggra10792.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000225_pilon 91677..92663 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10792.t1.exon1Ggra10792.t1.exon1Gracilaria gracilis GNS1m maleexontig00000225_pilon 91677..92663 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10792.t1.start1Ggra10792.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000225_pilon 92661..92663 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10792.t1Ggra10792.t1Gracilaria gracilis GNS1m malepolypeptidetig00000225_pilon 91677..92663 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10792.t1 ID=Ggra10792.t1|Name=Ggra10792.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=329bp
MAPSNPPLSVFTPSPVKKTTKPVVACNEENNFDGNNLFDSSLDELPSAET
VSVQSDEIQTCTHPVYFSSETDHILRTTATSNASEKTAPQGNIHKENEPG
TQWGVKRNTDSESDNTFKCDIMQSTEPEIYSEDFSLMCKDVQVNTVEIES
LHAPSVSQRNKTNVSEACNAFEAVNSATEDIWAALFCDPAEYMDDILEEE
VKEIEHVGDNENAENNMTTAERSNAHKIGGLQGWDYANAFEEVELQLDNA
DSILGIRFHKEANTVIENVMKEIRLNDNNPQFFDESNISLLDVFDVFLPA
SLLEKLRAYINRVLCARKEKATTAMELK*
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spliced messenger RNA

>Ggra10792.t1 ID=Ggra10792.t1|Name=Ggra10792.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=987bp|location=Sequence derived from alignment at tig00000225_pilon:91677..92663- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCACCCTCTAATCCACCACTGAGCGTCTTCACACCATCGCCTGTGAA
AAAAACCACCAAACCCGTTGTAGCCTGCAACGAAGAAAATAACTTTGACG
GAAACAATTTGTTTGATTCCTCTTTGGATGAACTGCCGAGCGCAGAAACC
GTTTCTGTTCAATCTGATGAGATTCAGACTTGTACACACCCTGTATACTT
CTCTTCCGAAACTGATCATATCTTACGAACAACAGCCACTTCCAATGCAT
CAGAGAAAACTGCTCCGCAAGGTAATATCCATAAAGAAAATGAGCCAGGG
ACTCAATGGGGTGTGAAACGCAATACAGATTCTGAATCAGATAACACCTT
CAAATGTGACATCATGCAGAGCACAGAACCGGAGATATACAGTGAAGATT
TTTCCTTGATGTGCAAAGATGTGCAAGTCAACACAGTAGAGATTGAATCA
CTACACGCTCCGAGTGTTTCACAAAGAAACAAAACGAATGTTTCCGAGGC
CTGCAACGCGTTTGAAGCTGTAAACAGTGCCACTGAAGACATTTGGGCGG
CATTATTTTGCGATCCGGCGGAGTACATGGACGACATTCTCGAAGAAGAG
GTGAAGGAAATTGAACATGTAGGAGACAATGAGAATGCCGAAAATAACAT
GACAACTGCAGAGCGCAGCAACGCCCACAAAATAGGAGGGTTACAAGGAT
GGGACTACGCCAATGCATTTGAAGAAGTCGAACTTCAGCTCGATAATGCA
GACAGTATTCTTGGTATCCGTTTCCACAAAGAGGCGAACACAGTAATAGA
GAATGTTATGAAAGAAATTCGTCTGAACGACAACAACCCGCAGTTCTTTG
ATGAATCAAACATATCATTACTAGATGTGTTTGATGTTTTCTTGCCTGCT
TCACTGCTGGAGAAACTACGTGCATATATTAATCGGGTGTTGTGTGCGAG
GAAAGAGAAGGCAACAACTGCGATGGAGTTGAAGTGA
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protein sequence of Ggra10792.t1

>Ggra10792.t1 ID=Ggra10792.t1|Name=Ggra10792.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=329bp
MAPSNPPLSVFTPSPVKKTTKPVVACNEENNFDGNNLFDSSLDELPSAET
VSVQSDEIQTCTHPVYFSSETDHILRTTATSNASEKTAPQGNIHKENEPG
TQWGVKRNTDSESDNTFKCDIMQSTEPEIYSEDFSLMCKDVQVNTVEIES
LHAPSVSQRNKTNVSEACNAFEAVNSATEDIWAALFCDPAEYMDDILEEE
VKEIEHVGDNENAENNMTTAERSNAHKIGGLQGWDYANAFEEVELQLDNA
DSILGIRFHKEANTVIENVMKEIRLNDNNPQFFDESNISLLDVFDVFLPA
SLLEKLRAYINRVLCARKEKATTAMELK*
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mRNA from alignment at tig00000225_pilon:91677..92663-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10792.t1 ID=Ggra10792.t1|Name=Ggra10792.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=987bp|location=Sequence derived from alignment at tig00000225_pilon:91677..92663- (Gracilaria gracilis GNS1m male)
ATGGCACCCTCTAATCCACCACTGAGCGTCTTCACACCATCGCCTGTGAA
AAAAACCACCAAACCCGTTGTAGCCTGCAACGAAGAAAATAACTTTGACG
GAAACAATTTGTTTGATTCCTCTTTGGATGAACTGCCGAGCGCAGAAACC
GTTTCTGTTCAATCTGATGAGATTCAGACTTGTACACACCCTGTATACTT
CTCTTCCGAAACTGATCATATCTTACGAACAACAGCCACTTCCAATGCAT
CAGAGAAAACTGCTCCGCAAGGTAATATCCATAAAGAAAATGAGCCAGGG
ACTCAATGGGGTGTGAAACGCAATACAGATTCTGAATCAGATAACACCTT
CAAATGTGACATCATGCAGAGCACAGAACCGGAGATATACAGTGAAGATT
TTTCCTTGATGTGCAAAGATGTGCAAGTCAACACAGTAGAGATTGAATCA
CTACACGCTCCGAGTGTTTCACAAAGAAACAAAACGAATGTTTCCGAGGC
CTGCAACGCGTTTGAAGCTGTAAACAGTGCCACTGAAGACATTTGGGCGG
CATTATTTTGCGATCCGGCGGAGTACATGGACGACATTCTCGAAGAAGAG
GTGAAGGAAATTGAACATGTAGGAGACAATGAGAATGCCGAAAATAACAT
GACAACTGCAGAGCGCAGCAACGCCCACAAAATAGGAGGGTTACAAGGAT
GGGACTACGCCAATGCATTTGAAGAAGTCGAACTTCAGCTCGATAATGCA
GACAGTATTCTTGGTATCCGTTTCCACAAAGAGGCGAACACAGTAATAGA
GAATGTTATGAAAGAAATTCGTCTGAACGACAACAACCCGCAGTTCTTTG
ATGAATCAAACATATCATTACTAGATGTGTTTGATGTTTTCTTGCCTGCT
TCACTGCTGGAGAAACTACGTGCATATATTAATCGGGTGTTGTGTGCGAG
GAAAGAGAAGGCAACAACTGCGATGGAGTTGAAGTGA
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Coding sequence (CDS) from alignment at tig00000225_pilon:91677..92663-

>Ggra10792.t1 ID=Ggra10792.t1|Name=Ggra10792.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=987bp|location=Sequence derived from alignment at tig00000225_pilon:91677..92663- (Gracilaria gracilis GNS1m male)
ATGGCACCCTCTAATCCACCACTGAGCGTCTTCACACCATCGCCTGTGAA
AAAAACCACCAAACCCGTTGTAGCCTGCAACGAAGAAAATAACTTTGACG
GAAACAATTTGTTTGATTCCTCTTTGGATGAACTGCCGAGCGCAGAAACC
GTTTCTGTTCAATCTGATGAGATTCAGACTTGTACACACCCTGTATACTT
CTCTTCCGAAACTGATCATATCTTACGAACAACAGCCACTTCCAATGCAT
CAGAGAAAACTGCTCCGCAAGGTAATATCCATAAAGAAAATGAGCCAGGG
ACTCAATGGGGTGTGAAACGCAATACAGATTCTGAATCAGATAACACCTT
CAAATGTGACATCATGCAGAGCACAGAACCGGAGATATACAGTGAAGATT
TTTCCTTGATGTGCAAAGATGTGCAAGTCAACACAGTAGAGATTGAATCA
CTACACGCTCCGAGTGTTTCACAAAGAAACAAAACGAATGTTTCCGAGGC
CTGCAACGCGTTTGAAGCTGTAAACAGTGCCACTGAAGACATTTGGGCGG
CATTATTTTGCGATCCGGCGGAGTACATGGACGACATTCTCGAAGAAGAG
GTGAAGGAAATTGAACATGTAGGAGACAATGAGAATGCCGAAAATAACAT
GACAACTGCAGAGCGCAGCAACGCCCACAAAATAGGAGGGTTACAAGGAT
GGGACTACGCCAATGCATTTGAAGAAGTCGAACTTCAGCTCGATAATGCA
GACAGTATTCTTGGTATCCGTTTCCACAAAGAGGCGAACACAGTAATAGA
GAATGTTATGAAAGAAATTCGTCTGAACGACAACAACCCGCAGTTCTTTG
ATGAATCAAACATATCATTACTAGATGTGTTTGATGTTTTCTTGCCTGCT
TCACTGCTGGAGAAACTACGTGCATATATTAATCGGGTGTTGTGTGCGAG
GAAAGAGAAGGCAACAACTGCGATGGAGTTGAAGTGA
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