Ggra10754.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10754.t1
Unique NameGgra10754.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length226
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000200_piloncontigtig00000200_pilon:131386..132063 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10754Ggra10754Gracilaria gracilis GNS1m malegenetig00000200_pilon 131386..132063 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10754.t1.start1Ggra10754.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000200_pilon 131386..131388 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10754.t1.CDS1Ggra10754.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000200_pilon 131386..132063 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10754.t1.exon1Ggra10754.t1.exon1Gracilaria gracilis GNS1m maleexontig00000200_pilon 131386..132063 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10754.t1.stop1Ggra10754.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000200_pilon 132061..132063 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10754.t1Ggra10754.t1Gracilaria gracilis GNS1m malepolypeptidetig00000200_pilon 131386..132063 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10754.t1 ID=Ggra10754.t1|Name=Ggra10754.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=226bp
MKLYRLASGRKDEKGVFQYAHDFLYVDAAEFLSAQPKFGDGYSGTSDSAT
GYRTKSDSDGPQENVKHGKQLVDSDSESSVCAEAKEELPKGRCRPIGIKK
RKAFEEQKKADEEVTKIMKTMEGQLRRASNAMERFCTQNALHNQRENEFK
LLQVLPEGSEERNMIMNRILCEVQAPKSTTPYDCRGGASSAFDVDAVQGI
SMAEGVEDAEDAGHLSDEILPTGKP*
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spliced messenger RNA

>Ggra10754.t1 ID=Ggra10754.t1|Name=Ggra10754.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=678bp|location=Sequence derived from alignment at tig00000200_pilon:131386..132063+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGCTCTACCGCCTGGCAAGTGGACGCAAGGATGAGAAGGGAGTATT
CCAGTACGCTCATGATTTTCTGTACGTAGATGCTGCTGAGTTTCTGTCAG
CTCAGCCTAAATTCGGAGATGGATACAGCGGTACCAGCGATTCCGCAACT
GGTTATCGTACCAAATCAGACAGTGATGGACCGCAGGAGAATGTGAAGCA
TGGAAAACAATTGGTGGATTCGGATTCTGAGAGTAGTGTCTGCGCAGAGG
CCAAAGAAGAGCTACCGAAAGGGAGATGTAGACCAATTGGTATCAAGAAG
AGAAAGGCGTTTGAGGAGCAGAAAAAGGCTGATGAGGAAGTGACAAAGAT
TATGAAGACAATGGAAGGACAGCTACGTCGAGCCAGTAATGCGATGGAGC
GCTTCTGTACACAAAACGCCCTCCATAATCAGCGTGAGAACGAATTCAAG
TTACTACAGGTTCTGCCGGAGGGCAGTGAGGAGAGAAACATGATAATGAA
TCGGATTCTGTGCGAAGTACAGGCACCGAAGAGCACCACACCATACGACT
GCAGAGGAGGAGCATCAAGTGCATTCGATGTAGACGCTGTACAAGGGATA
AGCATGGCAGAAGGTGTAGAGGATGCGGAAGATGCAGGACACCTAAGTGA
TGAAATTCTTCCAACTGGAAAACCATAA
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protein sequence of Ggra10754.t1

>Ggra10754.t1 ID=Ggra10754.t1|Name=Ggra10754.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=226bp
MKLYRLASGRKDEKGVFQYAHDFLYVDAAEFLSAQPKFGDGYSGTSDSAT
GYRTKSDSDGPQENVKHGKQLVDSDSESSVCAEAKEELPKGRCRPIGIKK
RKAFEEQKKADEEVTKIMKTMEGQLRRASNAMERFCTQNALHNQRENEFK
LLQVLPEGSEERNMIMNRILCEVQAPKSTTPYDCRGGASSAFDVDAVQGI
SMAEGVEDAEDAGHLSDEILPTGKP*
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mRNA from alignment at tig00000200_pilon:131386..132063+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10754.t1 ID=Ggra10754.t1|Name=Ggra10754.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=678bp|location=Sequence derived from alignment at tig00000200_pilon:131386..132063+ (Gracilaria gracilis GNS1m male)
ATGAAGCTCTACCGCCTGGCAAGTGGACGCAAGGATGAGAAGGGAGTATT
CCAGTACGCTCATGATTTTCTGTACGTAGATGCTGCTGAGTTTCTGTCAG
CTCAGCCTAAATTCGGAGATGGATACAGCGGTACCAGCGATTCCGCAACT
GGTTATCGTACCAAATCAGACAGTGATGGACCGCAGGAGAATGTGAAGCA
TGGAAAACAATTGGTGGATTCGGATTCTGAGAGTAGTGTCTGCGCAGAGG
CCAAAGAAGAGCTACCGAAAGGGAGATGTAGACCAATTGGTATCAAGAAG
AGAAAGGCGTTTGAGGAGCAGAAAAAGGCTGATGAGGAAGTGACAAAGAT
TATGAAGACAATGGAAGGACAGCTACGTCGAGCCAGTAATGCGATGGAGC
GCTTCTGTACACAAAACGCCCTCCATAATCAGCGTGAGAACGAATTCAAG
TTACTACAGGTTCTGCCGGAGGGCAGTGAGGAGAGAAACATGATAATGAA
TCGGATTCTGTGCGAAGTACAGGCACCGAAGAGCACCACACCATACGACT
GCAGAGGAGGAGCATCAAGTGCATTCGATGTAGACGCTGTACAAGGGATA
AGCATGGCAGAAGGTGTAGAGGATGCGGAAGATGCAGGACACCTAAGTGA
TGAAATTCTTCCAACTGGAAAACCATAA
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Coding sequence (CDS) from alignment at tig00000200_pilon:131386..132063+

>Ggra10754.t1 ID=Ggra10754.t1|Name=Ggra10754.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=678bp|location=Sequence derived from alignment at tig00000200_pilon:131386..132063+ (Gracilaria gracilis GNS1m male)
ATGAAGCTCTACCGCCTGGCAAGTGGACGCAAGGATGAGAAGGGAGTATT
CCAGTACGCTCATGATTTTCTGTACGTAGATGCTGCTGAGTTTCTGTCAG
CTCAGCCTAAATTCGGAGATGGATACAGCGGTACCAGCGATTCCGCAACT
GGTTATCGTACCAAATCAGACAGTGATGGACCGCAGGAGAATGTGAAGCA
TGGAAAACAATTGGTGGATTCGGATTCTGAGAGTAGTGTCTGCGCAGAGG
CCAAAGAAGAGCTACCGAAAGGGAGATGTAGACCAATTGGTATCAAGAAG
AGAAAGGCGTTTGAGGAGCAGAAAAAGGCTGATGAGGAAGTGACAAAGAT
TATGAAGACAATGGAAGGACAGCTACGTCGAGCCAGTAATGCGATGGAGC
GCTTCTGTACACAAAACGCCCTCCATAATCAGCGTGAGAACGAATTCAAG
TTACTACAGGTTCTGCCGGAGGGCAGTGAGGAGAGAAACATGATAATGAA
TCGGATTCTGTGCGAAGTACAGGCACCGAAGAGCACCACACCATACGACT
GCAGAGGAGGAGCATCAAGTGCATTCGATGTAGACGCTGTACAAGGGATA
AGCATGGCAGAAGGTGTAGAGGATGCGGAAGATGCAGGACACCTAAGTGA
TGAAATTCTTCCAACTGGAAAACCATAA
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